RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 MINPP1Q9UNW1 487 aa9.17□□□□□ -0.94
USP46-203ENST00000502443 XDHP47989 1333 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 RIMBP2O15034 1052 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 UFL1O94874 794 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 KIAA2012Q0VF49 1180 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 RABL6Q3YEC7 729 aaPredicted RBP9.16□□□□□ -0.94
USP46-203ENST00000502443 DZIP1LQ8IYY4 767 aaKnown RBP9.16□□□□□ -0.94
USP46-203ENST00000502443 TMEM57Q8N5G2 664 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 ANKRD44Q8N8A2 993 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 TBC1D16Q8TBP0 767 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 ZNF594Q96JF6 807 aaPredicted RBP9.16□□□□□ -0.94
USP46-203ENST00000502443 EYA3Q99504 573 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 MEIS3Q99687 375 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 NMRK2Q9NPI5 230 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 PODXL2Q9NZ53 605 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 GGA1Q9UJY5 639 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 HDAC5Q9UQL6 1122 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 COL4A5P29400 1685 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 DUOX1Q9NRD9 1551 aa9.16□□□□□ -0.94
USP46-203ENST00000502443 ZNF541Q9H0D2 1346 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 LTBP1Q14766 1721 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 FZD9O00144 591 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 DDNO94850 711 aaPredicted RBP9.15□□□□□ -0.94
USP46-203ENST00000502443 GNAI3P08754 354 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 EIF6P56537 245 aaKnown RBP9.15□□□□□ -0.94
USP46-203ENST00000502443 LDHAL6AQ6ZMR3 332 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 GPR101Q96P66 508 aaPredicted RBP9.15□□□□□ -0.94
USP46-203ENST00000502443 ZC3H12CQ9C0D7 883 aaKnown RBP9.15□□□□□ -0.94
USP46-203ENST00000502443 RRAGCQ9HB90 399 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 CNNM1Q9NRU3 951 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 ZNRF3Q9ULT6 936 aa9.15□□□□□ -0.94
USP46-203ENST00000502443 LRRFIP2Q9Y608 721 aaKnown RBP9.15□□□□□ -0.94
USP46-203ENST00000502443 WTIPA6NIX2 430 aaPredicted RBP9.14□□□□□ -0.95
USP46-203ENST00000502443 G3V3G9 751 aa9.14□□□□□ -0.95
USP46-203ENST00000502443 RLBP1P12271 317 aa9.14□□□□□ -0.95
USP46-203ENST00000502443 CHRNDQ07001 517 aa9.14□□□□□ -0.95
USP46-203ENST00000502443 DCAF8Q5TAQ9 597 aa9.14□□□□□ -0.95
USP46-203ENST00000502443 ITPRIPQ8IWB1 547 aa9.14□□□□□ -0.95
USP46-203ENST00000502443 HELBQ8NG08 1087 aaPredicted RBP9.14□□□□□ -0.95
USP46-203ENST00000502443 ANKRD2Q9GZV1 360 aa9.14□□□□□ -0.95
USP46-203ENST00000502443 GJA3Q9Y6H8 435 aa9.14□□□□□ -0.95
USP46-203ENST00000502443 KIF3CO14782 793 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 PLIN1O60240 522 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 TAF5LO75529 589 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 MS4A1P11836 297 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 VEGFAP15692 232 aaPredicted RBP9.13□□□□□ -0.95
USP46-203ENST00000502443 KCNJ4P48050 445 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 DOK7Q18PE1 504 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 GPC2Q8N158 579 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 KLHDC4Q8TBB5 520 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 PANK1Q8TE04 598 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 PUS3Q9BZE2 481 aaKnown RBP9.13□□□□□ -0.95
USP46-203ENST00000502443 DBNDD1Q9H9R9 158 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 LEMD3Q9Y2U8 911 aa9.13□□□□□ -0.95
USP46-203ENST00000502443 ZNF804BA4D1E1 1349 aa9.12□□□□□ -0.95
USP46-203ENST00000502443 YDJCA8MPS7 323 aa9.12□□□□□ -0.95
USP46-203ENST00000502443 SNAP23O00161 211 aa9.12□□□□□ -0.95
USP46-203ENST00000502443 ECE2O60344 883 aa9.12□□□□□ -0.95
USP46-203ENST00000502443 RAD17O75943 681 aa9.12□□□□□ -0.95
USP46-203ENST00000502443 GNAI2P04899 355 aa9.12□□□□□ -0.95
USP46-203ENST00000502443 CXCL9Q07325 125 aa9.12□□□□□ -0.95
USP46-203ENST00000502443 C16orf71Q8IYS4 520 aaPredicted RBP9.12□□□□□ -0.95
USP46-203ENST00000502443 WDR90Q96KV7 1748 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 IQCA1LA6NCM1 817 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 POTECB2RU33 542 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 ZBTB7BO15156 539 aaPredicted RBP9.11□□□□□ -0.95
USP46-203ENST00000502443 SRGAP3O43295 1099 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 RFX5P48382 616 aaPredicted RBP9.11□□□□□ -0.95
USP46-203ENST00000502443 TNIP1Q15025 636 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 LRRC24Q50LG9 513 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 METTL24Q5JXM2 366 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 CIAPIN1Q6FI81 312 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.11□□□□□ -0.95
USP46-203ENST00000502443 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
USP46-203ENST00000502443 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 RIPOR2Q9Y4F9 1068 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 A0A1B0GUL6 1792 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 MED23Q9ULK4 1368 aa9.11□□□□□ -0.95
USP46-203ENST00000502443 SCN4AP35499 1836 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 MROH5Q6ZUA9 1318 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 TOMM70O94826 608 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 KLRK1P26718 216 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 LMOD1P29536 600 aaPredicted RBP9.1□□□□□ -0.95
USP46-203ENST00000502443 PTPN12Q05209 780 aaKnown RBP9.1□□□□□ -0.95
USP46-203ENST00000502443 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 SIL1Q9H173 461 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 HACL1Q9UJ83 578 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
USP46-203ENST00000502443 EYA2O00167 538 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 PSMD14O00487 310 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 PDE8BO95263 885 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 EPHX2P34913 555 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 GMPSP49915 693 aaPredicted RBP9.09□□□□□ -0.95
USP46-203ENST00000502443 SCNN1DP51172 638 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 C1QTNF8P60827 252 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 MTX1Q13505 466 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 UBE4AQ14139 1066 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 MVPQ14764 893 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms