RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 PTPN12Q05209 780 aaKnown RBP17.7■□□□□ 0.42
RNF4-202ENST00000502316 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
RNF4-202ENST00000502316 DPP8Q6V1X1 898 aaPredicted RBP17.7■□□□□ 0.42
RNF4-202ENST00000502316 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
RNF4-202ENST00000502316 MPNDQ8N594 471 aa17.7■□□□□ 0.42
RNF4-202ENST00000502316 C1orf115Q9H7X2 142 aa17.7■□□□□ 0.42
RNF4-202ENST00000502316 A0A1B0GUL6 1792 aa17.69■□□□□ 0.42
RNF4-202ENST00000502316 SRGAP3O43295 1099 aa17.69■□□□□ 0.42
RNF4-202ENST00000502316 LMNB1P20700 586 aa17.69■□□□□ 0.42
RNF4-202ENST00000502316 GPSM2P81274 684 aa17.69■□□□□ 0.42
RNF4-202ENST00000502316 NSFL1CQ9UNZ2 370 aaKnown RBP17.69■□□□□ 0.42
RNF4-202ENST00000502316 XDHP47989 1333 aa17.69■□□□□ 0.42
RNF4-202ENST00000502316 PNMA6EA0A0J9YXQ4 647 aa17.68■□□□□ 0.42
RNF4-202ENST00000502316 CEP85Q6P2H3 762 aa17.68■□□□□ 0.42
RNF4-202ENST00000502316 SUPT20HQ8NEM7 779 aa17.68■□□□□ 0.42
RNF4-202ENST00000502316 KLHDC4Q8TBB5 520 aa17.68■□□□□ 0.42
RNF4-202ENST00000502316 VPS33BQ9H267 617 aa17.68■□□□□ 0.42
RNF4-202ENST00000502316 COPRSQ9NQ92 184 aa17.68■□□□□ 0.42
RNF4-202ENST00000502316 FBXO3Q9UK99 471 aa17.68■□□□□ 0.42
RNF4-202ENST00000502316 RIPOR2Q9Y4F9 1068 aa17.68■□□□□ 0.42
RNF4-202ENST00000502316 ATP8B2P98198 1209 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 CHRNDQ07001 517 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 POLA2Q14181 598 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 TBC1D16Q8TBP0 767 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 SSH3Q8TE77 659 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
RNF4-202ENST00000502316 ANKRD2Q9GZV1 360 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 CNNM1Q9NRU3 951 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 ANKIB1Q9P2G1 1089 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
RNF4-202ENST00000502316 DICER1Q9UPY3 1922 aaKnown RBP17.66■□□□□ 0.42
RNF4-202ENST00000502316 CIAO1O76071 339 aa17.66■□□□□ 0.42
RNF4-202ENST00000502316 IARSP41252 1262 aaKnown RBP17.66■□□□□ 0.42
RNF4-202ENST00000502316 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
RNF4-202ENST00000502316 C9orf131Q5VYM1 1079 aa17.66■□□□□ 0.42
RNF4-202ENST00000502316 ZNF277Q9NRM2 450 aaPredicted RBP17.66■□□□□ 0.42
RNF4-202ENST00000502316 GGA1Q9UJY5 639 aa17.66■□□□□ 0.42
RNF4-202ENST00000502316 MROH5Q6ZUA9 1318 aa17.66■□□□□ 0.42
RNF4-202ENST00000502316 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
RNF4-202ENST00000502316 EYA2O00167 538 aa17.65■□□□□ 0.42
RNF4-202ENST00000502316 ATP2B4P23634 1241 aa17.65■□□□□ 0.42
RNF4-202ENST00000502316 RPAP2Q8IXW5 612 aaPredicted RBP17.65■□□□□ 0.42
RNF4-202ENST00000502316 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
RNF4-202ENST00000502316 RNF181Q9P0P0 153 aa17.65■□□□□ 0.42
RNF4-202ENST00000502316 ZC3H4Q9UPT8 1303 aaKnown RBP17.65■□□□□ 0.42
RNF4-202ENST00000502316 COL4A5P29400 1685 aa17.64■□□□□ 0.42
RNF4-202ENST00000502316 TIAM2Q8IVF5 1701 aa17.64■□□□□ 0.41
RNF4-202ENST00000502316 UFL1O94874 794 aa17.64■□□□□ 0.41
RNF4-202ENST00000502316 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
RNF4-202ENST00000502316 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
RNF4-202ENST00000502316 VGLL2Q8N8G2 317 aa17.64■□□□□ 0.41
RNF4-202ENST00000502316 PA2G4Q9UQ80 394 aaKnown RBP17.64■□□□□ 0.41
RNF4-202ENST00000502316 LEMD3Q9Y2U8 911 aa17.64■□□□□ 0.41
RNF4-202ENST00000502316 C6orf229H3BNL8 230 aa17.63■□□□□ 0.41
RNF4-202ENST00000502316 EYA3Q99504 573 aa17.63■□□□□ 0.41
RNF4-202ENST00000502316 MED23Q9ULK4 1368 aa17.63■□□□□ 0.41
RNF4-202ENST00000502316 WTIPA6NIX2 430 aaPredicted RBP17.62■□□□□ 0.41
RNF4-202ENST00000502316 PPIP5K2O43314 1243 aa17.62■□□□□ 0.41
RNF4-202ENST00000502316 IL15P40933 162 aaPredicted RBP17.62■□□□□ 0.41
RNF4-202ENST00000502316 AAMPQ13685 434 aa17.62■□□□□ 0.41
RNF4-202ENST00000502316 AOC3Q16853 763 aa17.62■□□□□ 0.41
RNF4-202ENST00000502316 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
RNF4-202ENST00000502316 SIRT2Q8IXJ6 389 aa17.62■□□□□ 0.41
RNF4-202ENST00000502316 SIL1Q9H173 461 aa17.62■□□□□ 0.41
RNF4-202ENST00000502316 ZNF804BA4D1E1 1349 aa17.62■□□□□ 0.41
RNF4-202ENST00000502316 TAF5LO75529 589 aa17.61■□□□□ 0.41
RNF4-202ENST00000502316 PDE8BO95263 885 aa17.61■□□□□ 0.41
RNF4-202ENST00000502316 METTL24Q5JXM2 366 aa17.61■□□□□ 0.41
RNF4-202ENST00000502316 C15orf52Q6ZUT6 534 aaKnown RBP17.61■□□□□ 0.41
RNF4-202ENST00000502316 LARGE2Q8N3Y3 721 aa17.61■□□□□ 0.41
RNF4-202ENST00000502316 HELBQ8NG08 1087 aaPredicted RBP17.61■□□□□ 0.41
RNF4-202ENST00000502316 NOP58Q9Y2X3 529 aaKnown RBP17.61■□□□□ 0.41
RNF4-202ENST00000502316 IRS2Q9Y4H2 1338 aa17.61■□□□□ 0.41
RNF4-202ENST00000502316 UBE4AQ14139 1066 aa17.6■□□□□ 0.41
RNF4-202ENST00000502316 GPR101Q96P66 508 aaPredicted RBP17.6■□□□□ 0.41
RNF4-202ENST00000502316 FZD9O00144 591 aa17.59■□□□□ 0.41
RNF4-202ENST00000502316 SNAP23O00161 211 aa17.59■□□□□ 0.41
RNF4-202ENST00000502316 HMMRO75330 724 aa17.59■□□□□ 0.41
RNF4-202ENST00000502316 KCNJ4P48050 445 aa17.59■□□□□ 0.41
RNF4-202ENST00000502316 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
RNF4-202ENST00000502316 ZC3H12CQ9C0D7 883 aaKnown RBP17.59■□□□□ 0.41
RNF4-202ENST00000502316 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.4
RNF4-202ENST00000502316 FGFR2P21802 821 aa17.58■□□□□ 0.4
RNF4-202ENST00000502316 NIM1KQ8IY84 436 aa17.58■□□□□ 0.4
RNF4-202ENST00000502316 CEP126Q9P2H0 1117 aa17.58■□□□□ 0.4
RNF4-202ENST00000502316 RIMBP2O15034 1052 aa17.57■□□□□ 0.4
RNF4-202ENST00000502316 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
RNF4-202ENST00000502316 KLRK1P26718 216 aa17.57■□□□□ 0.4
RNF4-202ENST00000502316 G3BP1Q13283 466 aaKnown RBP eCLIP17.57■□□□□ 0.4
RNF4-202ENST00000502316 PUM3Q15397 648 aaKnown RBP17.57■□□□□ 0.4
RNF4-202ENST00000502316 TXNRD3Q86VQ6 643 aa17.57■□□□□ 0.4
RNF4-202ENST00000502316 EXOC6Q8TAG9 804 aa17.57■□□□□ 0.4
RNF4-202ENST00000502316 ZNRF3Q9ULT6 936 aa17.57■□□□□ 0.4
RNF4-202ENST00000502316 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
RNF4-202ENST00000502316 SASH1O94885 1247 aa17.56■□□□□ 0.4
RNF4-202ENST00000502316 YY1P25490 414 aa17.55■□□□□ 0.4
RNF4-202ENST00000502316 LPIN2Q92539 896 aa17.55■□□□□ 0.4
RNF4-202ENST00000502316 DBNDD1Q9H9R9 158 aa17.55■□□□□ 0.4
RNF4-202ENST00000502316 ZNF541Q9H0D2 1346 aa17.54■□□□□ 0.4
RNF4-202ENST00000502316 YDJCA8MPS7 323 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms