RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 CNKSR1Q969H4 720 aa24.21■■□□□ 1.47
LINC01550-201ENST00000499006 LTBP1Q14766 1721 aa24.21■■□□□ 1.47
LINC01550-201ENST00000499006 RAB11FIP3O75154 756 aa24.2■■□□□ 1.47
LINC01550-201ENST00000499006 SASH1O94885 1247 aa24.2■■□□□ 1.47
LINC01550-201ENST00000499006 IL15P40933 162 aaPredicted RBP24.2■■□□□ 1.47
LINC01550-201ENST00000499006 KLHL34Q8N239 644 aa24.2■■□□□ 1.47
LINC01550-201ENST00000499006 CNNM1Q9NRU3 951 aa24.2■■□□□ 1.47
LINC01550-201ENST00000499006 ARFGEF1Q9Y6D6 1849 aa24.2■■□□□ 1.46
LINC01550-201ENST00000499006 TMC4Q7Z404 712 aa24.19■■□□□ 1.46
LINC01550-201ENST00000499006 FHDC1Q9C0D6 1143 aaPredicted RBP24.19■■□□□ 1.46
LINC01550-201ENST00000499006 MROH5Q6ZUA9 1318 aa24.18■■□□□ 1.46
LINC01550-201ENST00000499006 PPEF1O14829 653 aaPredicted RBP24.18■■□□□ 1.46
LINC01550-201ENST00000499006 OS9Q13438 667 aaPredicted RBP24.18■■□□□ 1.46
LINC01550-201ENST00000499006 PRPF40BQ6NWY9 871 aaKnown RBP24.18■■□□□ 1.46
LINC01550-201ENST00000499006 ERC1Q8IUD2 1116 aa24.18■■□□□ 1.46
LINC01550-201ENST00000499006 NLGN2Q8NFZ4 835 aa24.18■■□□□ 1.46
LINC01550-201ENST00000499006 MINPP1Q9UNW1 487 aa24.18■■□□□ 1.46
LINC01550-201ENST00000499006 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.18■■□□□ 1.46
LINC01550-201ENST00000499006 TTLL6Q8N841 843 aa24.17■■□□□ 1.46
LINC01550-201ENST00000499006 VGLL2Q8N8G2 317 aa24.17■■□□□ 1.46
LINC01550-201ENST00000499006 RHPN1Q8TCX5 695 aa24.17■■□□□ 1.46
LINC01550-201ENST00000499006 KIF1BPQ96EK5 621 aa24.17■■□□□ 1.46
LINC01550-201ENST00000499006 CHRNDQ07001 517 aa24.16■■□□□ 1.46
LINC01550-201ENST00000499006 SLC51AQ86UW1 340 aa24.16■■□□□ 1.46
LINC01550-201ENST00000499006 PIM2Q9P1W9 311 aa24.16■■□□□ 1.46
LINC01550-201ENST00000499006 ATP6V0A2Q9Y487 856 aa24.16■■□□□ 1.46
LINC01550-201ENST00000499006 ARAP2Q8WZ64 1704 aa24.16■■□□□ 1.46
LINC01550-201ENST00000499006 APBB1O00213 710 aa24.15■■□□□ 1.46
LINC01550-201ENST00000499006 SP8Q8IXZ3 490 aa24.15■■□□□ 1.46
LINC01550-201ENST00000499006 C7orf43Q8WVR3 580 aa24.15■■□□□ 1.46
LINC01550-201ENST00000499006 SYT17Q9BSW7 474 aa24.15■■□□□ 1.46
LINC01550-201ENST00000499006 LRRCC1Q9C099 1032 aa24.15■■□□□ 1.46
LINC01550-201ENST00000499006 NUCB1Q02818 461 aa24.14■■□□□ 1.46
LINC01550-201ENST00000499006 TFCP2Q12800 502 aa24.14■■□□□ 1.46
LINC01550-201ENST00000499006 METTL24Q5JXM2 366 aa24.14■■□□□ 1.46
LINC01550-201ENST00000499006 ANKRD45Q5TZF3 282 aa24.13■■□□□ 1.45
LINC01550-201ENST00000499006 CEP126Q9P2H0 1117 aa24.13■■□□□ 1.45
LINC01550-201ENST00000499006 PDE8BO95263 885 aa24.13■■□□□ 1.45
LINC01550-201ENST00000499006 FER1L6Q2WGJ9 1857 aa24.12■■□□□ 1.45
LINC01550-201ENST00000499006 SNED1Q8TER0 1413 aa24.12■■□□□ 1.45
LINC01550-201ENST00000499006 SMARCA5O60264 1052 aaPredicted RBP24.12■■□□□ 1.45
LINC01550-201ENST00000499006 HELBQ8NG08 1087 aaPredicted RBP24.12■■□□□ 1.45
LINC01550-201ENST00000499006 ANKRD2Q9GZV1 360 aa24.12■■□□□ 1.45
LINC01550-201ENST00000499006 IL1RAPL2Q9NP60 686 aa24.12■■□□□ 1.45
LINC01550-201ENST00000499006 GPR108Q9NPR9 543 aa24.12■■□□□ 1.45
LINC01550-201ENST00000499006 TAF5LO75529 589 aa24.11■■□□□ 1.45
LINC01550-201ENST00000499006 OLFM4Q6UX06 510 aa24.11■■□□□ 1.45
LINC01550-201ENST00000499006 ZNF609O15014 1411 aa24.11■■□□□ 1.45
LINC01550-201ENST00000499006 DUOX1Q9NRD9 1551 aa24.11■■□□□ 1.45
LINC01550-201ENST00000499006 DALRD3Q5D0E6 543 aaKnown RBP24.1■■□□□ 1.45
LINC01550-201ENST00000499006 CHD1LQ86WJ1 897 aa24.1■■□□□ 1.45
LINC01550-201ENST00000499006 PODXL2Q9NZ53 605 aa24.1■■□□□ 1.45
LINC01550-201ENST00000499006 FGFR2P21802 821 aa24.09■■□□□ 1.45
LINC01550-201ENST00000499006 GPSM2P81274 684 aa24.09■■□□□ 1.45
LINC01550-201ENST00000499006 TNNI3KQ59H18 835 aa24.09■■□□□ 1.45
LINC01550-201ENST00000499006 FPGT-TNNI3KV9GXZ4 949 aa24.09■■□□□ 1.45
LINC01550-201ENST00000499006 XDHP47989 1333 aa24.09■■□□□ 1.45
LINC01550-201ENST00000499006 CLASRPQ8N2M8 674 aaKnown RBP24.08■■□□□ 1.45
LINC01550-201ENST00000499006 EAF2Q96CJ1 260 aaPredicted RBP24.08■■□□□ 1.45
LINC01550-201ENST00000499006 LNPKQ9C0E8 428 aa24.08■■□□□ 1.45
LINC01550-201ENST00000499006 AKAP2Q9Y2D5 859 aa24.08■■□□□ 1.45
LINC01550-201ENST00000499006 C21orf2O43822 256 aa24.07■■□□□ 1.44
LINC01550-201ENST00000499006 PUM3Q15397 648 aaKnown RBP24.07■■□□□ 1.44
LINC01550-201ENST00000499006 CC2D2BQ6DHV5 1058 aa24.07■■□□□ 1.44
LINC01550-201ENST00000499006 WTIPA6NIX2 430 aaPredicted RBP24.07■■□□□ 1.44
LINC01550-201ENST00000499006 SNAP23O00161 211 aa24.07■■□□□ 1.44
LINC01550-201ENST00000499006 UBE4AQ14139 1066 aa24.07■■□□□ 1.44
LINC01550-201ENST00000499006 ANKIB1Q9P2G1 1089 aa24.07■■□□□ 1.44
LINC01550-201ENST00000499006 NSFL1CQ9UNZ2 370 aaKnown RBP24.07■■□□□ 1.44
LINC01550-201ENST00000499006 A0A1B0GUL7 405 aa24.06■■□□□ 1.44
LINC01550-201ENST00000499006 ATP2B3Q16720 1220 aa24.06■■□□□ 1.44
LINC01550-201ENST00000499006 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
LINC01550-201ENST00000499006 ZNF219Q9P2Y4 722 aaPredicted RBP24.06■■□□□ 1.44
LINC01550-201ENST00000499006 ZBTB47Q9UFB7 747 aaPredicted RBP24.06■■□□□ 1.44
LINC01550-201ENST00000499006 WWC3Q9ULE0 1092 aa24.06■■□□□ 1.44
LINC01550-201ENST00000499006 LEMD3Q9Y2U8 911 aa24.06■■□□□ 1.44
LINC01550-201ENST00000499006 TIMM10P62072 90 aa24.05■■□□□ 1.44
LINC01550-201ENST00000499006 GRIPAP1Q4V328 841 aa24.05■■□□□ 1.44
LINC01550-201ENST00000499006 C16orf71Q8IYS4 520 aaPredicted RBP24.05■■□□□ 1.44
LINC01550-201ENST00000499006 MPNDQ8N594 471 aa24.05■■□□□ 1.44
LINC01550-201ENST00000499006 LPIN2Q92539 896 aa24.05■■□□□ 1.44
LINC01550-201ENST00000499006 BCS1LQ9Y276 419 aa24.05■■□□□ 1.44
LINC01550-201ENST00000499006 ATP2B4P23634 1241 aa24.04■■□□□ 1.44
LINC01550-201ENST00000499006 AACSQ86V21 672 aa24.04■■□□□ 1.44
LINC01550-201ENST00000499006 TBC1D16Q8TBP0 767 aa24.04■■□□□ 1.44
LINC01550-201ENST00000499006 POLLQ9UGP5 575 aa24.04■■□□□ 1.44
LINC01550-201ENST00000499006 GGA1Q9UJY5 639 aa24.04■■□□□ 1.44
LINC01550-201ENST00000499006 ZNF804BA4D1E1 1349 aa24.04■■□□□ 1.44
LINC01550-201ENST00000499006 IRS2Q9Y4H2 1338 aa24.04■■□□□ 1.44
LINC01550-201ENST00000499006 CCDC88AQ3V6T2 1871 aa24.04■■□□□ 1.44
LINC01550-201ENST00000499006 MYH13Q9UKX3 1938 aa24.03■■□□□ 1.44
LINC01550-201ENST00000499006 CCDC93Q567U6 631 aa24.03■■□□□ 1.44
LINC01550-201ENST00000499006 SOGA3Q5TF21 947 aa24.03■■□□□ 1.44
LINC01550-201ENST00000499006 RTFDC1Q9BY42 306 aaPredicted RBP24.03■■□□□ 1.44
LINC01550-201ENST00000499006 SALL3Q9BXA9 1300 aa24.03■■□□□ 1.44
LINC01550-201ENST00000499006 PDE4AP27815 886 aa24.02■■□□□ 1.44
LINC01550-201ENST00000499006 DPP8Q6V1X1 898 aaPredicted RBP24.02■■□□□ 1.44
LINC01550-201ENST00000499006 CCDC8Q9H0W5 538 aaPredicted RBP24.02■■□□□ 1.44
LINC01550-201ENST00000499006 TLR7Q9NYK1 1049 aaKnown RBP24.02■■□□□ 1.44
LINC01550-201ENST00000499006 DBNLQ9UJU6 430 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms