RNA–Protein interactions for RNA: ENST00000498828.1

RNF7-207, Transcript of ring finger protein 7, humanhuman

TSL 2

Gene RNF7, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-207ENST00000498828 GGA3Q9NZ52 723 aa16.98■□□□□ 0.31
RNF7-207ENST00000498828 PSME4Q14997 1843 aa16.98■□□□□ 0.31
RNF7-207ENST00000498828 SF3B3Q15393 1217 aaKnown RBP16.97■□□□□ 0.31
RNF7-207ENST00000498828 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
RNF7-207ENST00000498828 EYA3Q99504 573 aa16.97■□□□□ 0.31
RNF7-207ENST00000498828 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.31
RNF7-207ENST00000498828 RASAL3Q86YV0 1011 aa16.96■□□□□ 0.31
RNF7-207ENST00000498828 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
RNF7-207ENST00000498828 PAPPA2Q9BXP8 1791 aa16.96■□□□□ 0.31
RNF7-207ENST00000498828 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
RNF7-207ENST00000498828 RIPK4P57078 832 aa16.95■□□□□ 0.3
RNF7-207ENST00000498828 TBC1D16Q8TBP0 767 aa16.95■□□□□ 0.3
RNF7-207ENST00000498828 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
RNF7-207ENST00000498828 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
RNF7-207ENST00000498828 ANGEL2Q5VTE6 544 aaKnown RBP16.93■□□□□ 0.3
RNF7-207ENST00000498828 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
RNF7-207ENST00000498828 ISCA1Q9BUE6 129 aa16.93■□□□□ 0.3
RNF7-207ENST00000498828 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
RNF7-207ENST00000498828 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
RNF7-207ENST00000498828 ZNF609O15014 1411 aa16.93■□□□□ 0.3
RNF7-207ENST00000498828 RPS8P62241 208 aaKnown RBP16.92■□□□□ 0.3
RNF7-207ENST00000498828 FKBP1BP68106 108 aa16.92■□□□□ 0.3
RNF7-207ENST00000498828 KRT24Q2M2I5 525 aa16.92■□□□□ 0.3
RNF7-207ENST00000498828 RTL5Q5HYW3 569 aaPredicted RBP16.92■□□□□ 0.3
RNF7-207ENST00000498828 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
RNF7-207ENST00000498828 G3V3G9 751 aa16.91■□□□□ 0.3
RNF7-207ENST00000498828 ZNF280AP59817 542 aaPredicted RBP16.91■□□□□ 0.3
RNF7-207ENST00000498828 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
RNF7-207ENST00000498828 SCARF1Q14162 830 aa16.91■□□□□ 0.3
RNF7-207ENST00000498828 PKN2Q16513 984 aaKnown RBP16.91■□□□□ 0.3
RNF7-207ENST00000498828 DCAF8Q5TAQ9 597 aa16.91■□□□□ 0.3
RNF7-207ENST00000498828 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
RNF7-207ENST00000498828 PODXL2Q9NZ53 605 aa16.91■□□□□ 0.3
RNF7-207ENST00000498828 IRS4O14654 1257 aaPredicted RBP16.9■□□□□ 0.3
RNF7-207ENST00000498828 UFL1O94874 794 aa16.9■□□□□ 0.3
RNF7-207ENST00000498828 TMPOP42166 694 aaKnown RBP16.9■□□□□ 0.3
RNF7-207ENST00000498828 RSBN1LQ6PCB5 846 aaPredicted RBP16.9■□□□□ 0.3
RNF7-207ENST00000498828 AGBL3Q8NEM8 1001 aa16.9■□□□□ 0.3
RNF7-207ENST00000498828 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
RNF7-207ENST00000498828 HDAC9Q9UKV0 1011 aa16.9■□□□□ 0.3
RNF7-207ENST00000498828 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
RNF7-207ENST00000498828 ANKIB1Q9P2G1 1089 aa16.89■□□□□ 0.29
RNF7-207ENST00000498828 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
RNF7-207ENST00000498828 CHL1O00533 1208 aa16.88■□□□□ 0.29
RNF7-207ENST00000498828 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
RNF7-207ENST00000498828 MOB2Q70IA6 237 aa16.88■□□□□ 0.29
RNF7-207ENST00000498828 MYOZ2Q9NPC6 264 aa16.88■□□□□ 0.29
RNF7-207ENST00000498828 SEC31BQ9NQW1 1179 aa16.88■□□□□ 0.29
RNF7-207ENST00000498828 GGA1Q9UJY5 639 aa16.88■□□□□ 0.29
RNF7-207ENST00000498828 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
RNF7-207ENST00000498828 USP17L8P0C7I0 530 aa16.86■□□□□ 0.29
RNF7-207ENST00000498828 TRIM28Q13263 835 aaKnown RBP16.86■□□□□ 0.29
RNF7-207ENST00000498828 GMLQ99445 158 aa16.86■□□□□ 0.29
RNF7-207ENST00000498828 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
RNF7-207ENST00000498828 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
RNF7-207ENST00000498828 MKI67P46013 3256 aaKnown RBP16.85■□□□□ 0.29
RNF7-207ENST00000498828 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
RNF7-207ENST00000498828 UBE2Q2LH0YL09 131 aa16.85■□□□□ 0.29
RNF7-207ENST00000498828 HOXB7P09629 217 aa16.85■□□□□ 0.29
RNF7-207ENST00000498828 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
RNF7-207ENST00000498828 GPR25O00155 361 aa16.84■□□□□ 0.29
RNF7-207ENST00000498828 TM4SF4P48230 202 aa16.84■□□□□ 0.29
RNF7-207ENST00000498828 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
RNF7-207ENST00000498828 NOM1Q5C9Z4 860 aaKnown RBP16.84■□□□□ 0.29
RNF7-207ENST00000498828 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
RNF7-207ENST00000498828 FBXO46Q6PJ61 603 aaPredicted RBP16.84■□□□□ 0.29
RNF7-207ENST00000498828 ZBTB38Q8NAP3 1195 aaPredicted RBP16.84■□□□□ 0.29
RNF7-207ENST00000498828 HTTP42858 3142 aa16.83■□□□□ 0.29
RNF7-207ENST00000498828 USP17L3A6NCW0 530 aa16.83■□□□□ 0.28
RNF7-207ENST00000498828 USP17L4A6NCW7 530 aa16.83■□□□□ 0.28
RNF7-207ENST00000498828 HSP90B1P14625 803 aaKnown RBP16.83■□□□□ 0.28
RNF7-207ENST00000498828 XDHP47989 1333 aa16.83■□□□□ 0.28
RNF7-207ENST00000498828 TTLL12Q14166 644 aaPredicted RBP16.83■□□□□ 0.28
RNF7-207ENST00000498828 CCDC152Q4G0S7 254 aa16.83■□□□□ 0.28
RNF7-207ENST00000498828 USP17L1Q7RTZ2 530 aa16.83■□□□□ 0.28
RNF7-207ENST00000498828 SPEF2Q9C093 1822 aa16.83■□□□□ 0.28
RNF7-207ENST00000498828 MKRN3Q13064 507 aaKnown RBP16.82■□□□□ 0.28
RNF7-207ENST00000498828 NBPF9Q3BBW0 867 aa16.82■□□□□ 0.28
RNF7-207ENST00000498828 RIC3Q7Z5B4 369 aa16.82■□□□□ 0.28
RNF7-207ENST00000498828 PODNQ7Z5L7 613 aa16.82■□□□□ 0.28
RNF7-207ENST00000498828 CENPFP49454 3210 aa16.82■□□□□ 0.28
RNF7-207ENST00000498828 NF2P35240 595 aa16.81■□□□□ 0.28
RNF7-207ENST00000498828 SREBF2Q12772 1141 aa16.81■□□□□ 0.28
RNF7-207ENST00000498828 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
RNF7-207ENST00000498828 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
RNF7-207ENST00000498828 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
RNF7-207ENST00000498828 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
RNF7-207ENST00000498828 MYH3P11055 1940 aa16.8■□□□□ 0.28
RNF7-207ENST00000498828 PDE8AO60658 829 aa16.8■□□□□ 0.28
RNF7-207ENST00000498828 FKTNO75072 461 aa16.8■□□□□ 0.28
RNF7-207ENST00000498828 ATP2B4P23634 1241 aa16.8■□□□□ 0.28
RNF7-207ENST00000498828 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
RNF7-207ENST00000498828 DUSP27Q5VZP5 1158 aa16.8■□□□□ 0.28
RNF7-207ENST00000498828 ANKRD18AQ8IVF6 992 aa16.8■□□□□ 0.28
RNF7-207ENST00000498828 CFHR5Q9BXR6 569 aa16.8■□□□□ 0.28
RNF7-207ENST00000498828 WNT10BO00744 389 aa16.79■□□□□ 0.28
RNF7-207ENST00000498828 PCCAP05165 728 aaPredicted RBP16.79■□□□□ 0.28
RNF7-207ENST00000498828 MYD88Q99836 296 aa16.79■□□□□ 0.28
RNF7-207ENST00000498828 MED23Q9ULK4 1368 aa16.78■□□□□ 0.28
RNF7-207ENST00000498828 BRCA2P51587 3418 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms