RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 GGA3Q9NZ52 723 aa12□□□□□ -0.49
CCDC171-209ENST00000498725 ERBB4Q15303 1308 aa12□□□□□ -0.49
CCDC171-209ENST00000498725 MAPK8IP3Q9UPT6 1336 aa12□□□□□ -0.49
CCDC171-209ENST00000498725 G3V3G9 751 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 GPSM2P81274 684 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 CTU1Q7Z7A3 348 aaKnown RBP11.99□□□□□ -0.49
CCDC171-209ENST00000498725 DPF2Q92785 391 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 CELF1Q92879 486 aaKnown RBP11.99□□□□□ -0.49
CCDC171-209ENST00000498725 PLEKHF1Q96S99 279 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 POLLQ9UGP5 575 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
CCDC171-209ENST00000498725 SH3TC1Q8TE82 1336 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
CCDC171-209ENST00000498725 RTL9Q8NET4 1388 aa11.98□□□□□ -0.49
CCDC171-209ENST00000498725 SLC10A3P09131 477 aa11.98□□□□□ -0.49
CCDC171-209ENST00000498725 TCIRG1Q13488 830 aa11.98□□□□□ -0.49
CCDC171-209ENST00000498725 SULF1Q8IWU6 871 aa11.98□□□□□ -0.49
CCDC171-209ENST00000498725 CDCA5Q96FF9 252 aa11.98□□□□□ -0.49
CCDC171-209ENST00000498725 FAM89AQ96GI7 184 aa11.98□□□□□ -0.49
CCDC171-209ENST00000498725 ATP5J2-PTCD1G3V325 749 aa11.97□□□□□ -0.49
CCDC171-209ENST00000498725 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
CCDC171-209ENST00000498725 KRT24Q2M2I5 525 aa11.97□□□□□ -0.49
CCDC171-209ENST00000498725 PRPF38BQ5VTL8 546 aaKnown RBP11.97□□□□□ -0.49
CCDC171-209ENST00000498725 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
CCDC171-209ENST00000498725 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
CCDC171-209ENST00000498725 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
CCDC171-209ENST00000498725 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
CCDC171-209ENST00000498725 PSME4Q14997 1843 aa11.96□□□□□ -0.49
CCDC171-209ENST00000498725 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
CCDC171-209ENST00000498725 RPS12P25398 132 aaKnown RBP11.96□□□□□ -0.49
CCDC171-209ENST00000498725 RIPK4P57078 832 aa11.96□□□□□ -0.49
CCDC171-209ENST00000498725 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
CCDC171-209ENST00000498725 MOB2Q70IA6 237 aa11.96□□□□□ -0.49
CCDC171-209ENST00000498725 TMC4Q7Z404 712 aa11.96□□□□□ -0.49
CCDC171-209ENST00000498725 RASAL3Q86YV0 1011 aa11.96□□□□□ -0.49
CCDC171-209ENST00000498725 EYA3Q99504 573 aa11.96□□□□□ -0.49
CCDC171-209ENST00000498725 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.49
CCDC171-209ENST00000498725 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
CCDC171-209ENST00000498725 SCARF1Q14162 830 aa11.95□□□□□ -0.5
CCDC171-209ENST00000498725 ZC3H12CQ9C0D7 883 aaKnown RBP11.95□□□□□ -0.5
CCDC171-209ENST00000498725 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
CCDC171-209ENST00000498725 PAPPA2Q9BXP8 1791 aa11.95□□□□□ -0.5
CCDC171-209ENST00000498725 UBE2Q2LH0YL09 131 aa11.94□□□□□ -0.5
CCDC171-209ENST00000498725 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-209ENST00000498725 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
CCDC171-209ENST00000498725 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
CCDC171-209ENST00000498725 TBC1D16Q8TBP0 767 aa11.94□□□□□ -0.5
CCDC171-209ENST00000498725 ANKIB1Q9P2G1 1089 aa11.94□□□□□ -0.5
CCDC171-209ENST00000498725 UFL1O94874 794 aa11.93□□□□□ -0.5
CCDC171-209ENST00000498725 VIL1P09327 827 aaKnown RBP11.93□□□□□ -0.5
CCDC171-209ENST00000498725 POLA2Q14181 598 aa11.93□□□□□ -0.5
CCDC171-209ENST00000498725 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
CCDC171-209ENST00000498725 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
CCDC171-209ENST00000498725 SEC31BQ9NQW1 1179 aa11.93□□□□□ -0.5
CCDC171-209ENST00000498725 IRS4O14654 1257 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-209ENST00000498725 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
CCDC171-209ENST00000498725 SF3B3Q15393 1217 aaKnown RBP11.92□□□□□ -0.5
CCDC171-209ENST00000498725 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
CCDC171-209ENST00000498725 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-209ENST00000498725 PRKG1Q13976 671 aa11.91□□□□□ -0.5
CCDC171-209ENST00000498725 HDGFL1Q5TGJ6 251 aa11.91□□□□□ -0.5
CCDC171-209ENST00000498725 RSBN1LQ6PCB5 846 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-209ENST00000498725 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
CCDC171-209ENST00000498725 JARID2Q92833 1246 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-209ENST00000498725 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
CCDC171-209ENST00000498725 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
CCDC171-209ENST00000498725 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
CCDC171-209ENST00000498725 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
CCDC171-209ENST00000498725 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
CCDC171-209ENST00000498725 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
CCDC171-209ENST00000498725 MYOZ2Q9NPC6 264 aa11.9□□□□□ -0.5
CCDC171-209ENST00000498725 GPR25O00155 361 aa11.89□□□□□ -0.51
CCDC171-209ENST00000498725 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
CCDC171-209ENST00000498725 ZNF280AP59817 542 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-209ENST00000498725 PKN2Q16513 984 aaKnown RBP11.89□□□□□ -0.51
CCDC171-209ENST00000498725 NBPF9Q3BBW0 867 aa11.89□□□□□ -0.51
CCDC171-209ENST00000498725 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
CCDC171-209ENST00000498725 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-209ENST00000498725 WTIPA6NIX2 430 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-209ENST00000498725 FKBP1BP68106 108 aa11.88□□□□□ -0.51
CCDC171-209ENST00000498725 LMOD3Q0VAK6 560 aa11.88□□□□□ -0.51
CCDC171-209ENST00000498725 FBXO46Q6PJ61 603 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-209ENST00000498725 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
CCDC171-209ENST00000498725 AGBL3Q8NEM8 1001 aa11.88□□□□□ -0.51
CCDC171-209ENST00000498725 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
CCDC171-209ENST00000498725 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
CCDC171-209ENST00000498725 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
CCDC171-209ENST00000498725 FKTNO75072 461 aa11.87□□□□□ -0.51
CCDC171-209ENST00000498725 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
CCDC171-209ENST00000498725 MYD88Q99836 296 aa11.87□□□□□ -0.51
CCDC171-209ENST00000498725 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
CCDC171-209ENST00000498725 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
CCDC171-209ENST00000498725 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
CCDC171-209ENST00000498725 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
CCDC171-209ENST00000498725 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
CCDC171-209ENST00000498725 MYH3P11055 1940 aa11.86□□□□□ -0.51
CCDC171-209ENST00000498725 SASH1O94885 1247 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms