RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 KCNF1Q9H3M0 494 aa5.28□□□□□ -1.56
TNC-208ENST00000498724 CYP46A1Q9Y6A2 500 aa5.28□□□□□ -1.56
TNC-208ENST00000498724 N4BP2Q86UW6 1770 aaPredicted RBP5.28□□□□□ -1.56
TNC-208ENST00000498724 USP31Q70CQ4 1352 aa5.28□□□□□ -1.56
TNC-208ENST00000498724 MAP3K5Q99683 1374 aa5.28□□□□□ -1.56
TNC-208ENST00000498724 LRRC37A3O60309 1634 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 TESPA1A2RU30 521 aaPredicted RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 GOLGA6L4A6NEF3 574 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 AP5Z1O43299 807 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 CTIFO43310 598 aaKnown RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 EVI5O60447 810 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 GLRX3O76003 335 aaKnown RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 TRIM37O94972 964 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 KIF20AO95235 890 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 LARGE1O95461 756 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 ZKSCAN1P17029 563 aaPredicted RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 PDCP20941 246 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 USP6P35125 1406 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 KCNJ4P48050 445 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 ZNF75DP51815 510 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 R3HDM1Q15032 1099 aaKnown RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 SYCP1Q15431 976 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 EZH2Q15910 746 aaKnown RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 CWC27Q6UX04 472 aaKnown RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 PPP1R42Q7Z4L9 355 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 FEZ1Q99689 392 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 TM6SF1Q9BZW5 370 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 IL25Q9H293 177 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 TNMDQ9H2S6 317 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 PRDM11Q9NQV5 511 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 DDX19AQ9NUU7 478 aaKnown RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 HYPKQ9NX55 129 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 OGFRQ9NZT2 677 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 CGNQ9P2M7 1197 aaKnown RBP5.27□□□□□ -1.57
TNC-208ENST00000498724 MRVI1Q9Y6F6 885 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 KIF1AQ12756 1690 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 TOPAZ1Q8N9V7 1692 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 FLT4P35916 1363 aa5.27□□□□□ -1.57
TNC-208ENST00000498724 ELP1O95163 1332 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 ACEP12821 1306 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 SPATA31A5Q5VU36 1347 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 TTC41PQ6P2S7 1318 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 CCDC171Q6TFL3 1326 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 SPATA31A7Q8IWB4 1347 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 TTC21AQ8NDW8 1320 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 USP42Q9H9J4 1324 aaKnown RBP5.26□□□□□ -1.57
TNC-208ENST00000498724 PLEKHG3A1L390 1219 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 GNAT3A8MTJ3 354 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 SRGAP3O43295 1099 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 APBA3O96018 575 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 CPA1P15085 419 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 U2AF2P26368 475 aaKnown RBP eCLIP5.26□□□□□ -1.57
TNC-208ENST00000498724 PSMA5P28066 241 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 PTGER2P43116 358 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 AMPHP49418 695 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 ANKRD1Q15327 319 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 HDGFL1Q5TGJ6 251 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 TAF3Q5VWG9 929 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 LARP1BQ659C4 914 aaKnown RBP5.26□□□□□ -1.57
TNC-208ENST00000498724 PRPF40BQ6NWY9 871 aaKnown RBP5.26□□□□□ -1.57
TNC-208ENST00000498724 ZNF771Q7L3S4 317 aaPredicted RBP5.26□□□□□ -1.57
TNC-208ENST00000498724 TTC6Q86TZ1 520 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 ERC1Q8IUD2 1116 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 ABTB2Q8N961 1025 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 CCDC112Q8NEF3 446 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 TDRD7Q8NHU6 1098 aaKnown RBP5.26□□□□□ -1.57
TNC-208ENST00000498724 KCNB2Q92953 911 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 EPAS1Q99814 870 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 TRIM5Q9C035 493 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 USP44Q9H0E7 712 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 CLSTN2Q9H4D0 955 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 CBX8Q9HC52 389 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 EMILIN3Q9NT22 766 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 BABAM1Q9NWV8 329 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 PODXL2Q9NZ53 605 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 SPG7Q9UQ90 795 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 PAXBP1Q9Y5B6 917 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 PCDHGA4Q9Y5G9 962 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 KDRP35968 1356 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.26□□□□□ -1.57
TNC-208ENST00000498724 CRYBG1Q9Y4K1 1723 aa5.26□□□□□ -1.57
TNC-208ENST00000498724 IGSF1Q8N6C5 1336 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 HIP1O00291 1037 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 SEMA3EO15041 775 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 IFIT2P09913 472 aaKnown RBP5.25□□□□□ -1.57
TNC-208ENST00000498724 TNNT1P13805 278 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 LIG1P18858 919 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 CDC25BP30305 580 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 PTH1RQ03431 593 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 GABPB1Q06547 395 aaPredicted RBP5.25□□□□□ -1.57
TNC-208ENST00000498724 NCBP1Q09161 790 aaKnown RBP5.25□□□□□ -1.57
TNC-208ENST00000498724 TAF7Q15545 349 aaPredicted RBP5.25□□□□□ -1.57
TNC-208ENST00000498724 CAMK4Q16566 473 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 ME3Q16798 604 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 TPD52L1Q16890 204 aaPredicted RBP5.25□□□□□ -1.57
TNC-208ENST00000498724 ANO6Q4KMQ2 910 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 RNF20Q5VTR2 975 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 CREB3L3Q68CJ9 461 aa5.25□□□□□ -1.57
TNC-208ENST00000498724 ZSCAN25Q6NSZ9 544 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms