RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 JDP2Q8WYK2 163 aa20.21■□□□□ 0.83
LMNA-217ENST00000498722 MPHOSPH8Q99549 860 aa20.21■□□□□ 0.83
LMNA-217ENST00000498722 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
LMNA-217ENST00000498722 DUOX1Q9NRD9 1551 aa20.2■□□□□ 0.82
LMNA-217ENST00000498722 C6orf229H3BNL8 230 aa20.2■□□□□ 0.82
LMNA-217ENST00000498722 PPIP5K2O43314 1243 aa20.2■□□□□ 0.82
LMNA-217ENST00000498722 UBTFL1P0CB47 393 aaPredicted RBP20.2■□□□□ 0.82
LMNA-217ENST00000498722 GPSM2P81274 684 aa20.2■□□□□ 0.82
LMNA-217ENST00000498722 CCDC57Q2TAC2 916 aa20.2■□□□□ 0.82
LMNA-217ENST00000498722 BICC1Q9H694 974 aaKnown RBP20.2■□□□□ 0.82
LMNA-217ENST00000498722 AOC3Q16853 763 aa20.19■□□□□ 0.82
LMNA-217ENST00000498722 PANK1Q8TE04 598 aa20.19■□□□□ 0.82
LMNA-217ENST00000498722 KDM2BQ8NHM5 1336 aa20.19■□□□□ 0.82
LMNA-217ENST00000498722 INTS3Q68E01 1043 aaKnown RBP20.18■□□□□ 0.82
LMNA-217ENST00000498722 BSDC1Q9NW68 430 aaPredicted RBP20.18■□□□□ 0.82
LMNA-217ENST00000498722 UFL1O94874 794 aa20.17■□□□□ 0.82
LMNA-217ENST00000498722 DPY19L2Q6NUT2 758 aa20.17■□□□□ 0.82
LMNA-217ENST00000498722 NIM1KQ8IY84 436 aa20.17■□□□□ 0.82
LMNA-217ENST00000498722 KAZALD1Q96I82 304 aa20.17■□□□□ 0.82
LMNA-217ENST00000498722 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
LMNA-217ENST00000498722 COL4A5P29400 1685 aa20.16■□□□□ 0.82
LMNA-217ENST00000498722 MVPQ14764 893 aaKnown RBP20.16■□□□□ 0.82
LMNA-217ENST00000498722 MEIS3Q99687 375 aa20.16■□□□□ 0.82
LMNA-217ENST00000498722 RTFDC1Q9BY42 306 aaPredicted RBP20.16■□□□□ 0.82
LMNA-217ENST00000498722 GGA1Q9UJY5 639 aa20.16■□□□□ 0.82
LMNA-217ENST00000498722 XDHP47989 1333 aa20.16■□□□□ 0.82
LMNA-217ENST00000498722 RIMBP2O15034 1052 aa20.15■□□□□ 0.82
LMNA-217ENST00000498722 WASHC4Q2M389 1173 aa20.15■□□□□ 0.82
LMNA-217ENST00000498722 TMEM57Q8N5G2 664 aa20.15■□□□□ 0.82
LMNA-217ENST00000498722 ZNF594Q96JF6 807 aaPredicted RBP20.15■□□□□ 0.82
LMNA-217ENST00000498722 EYA3Q99504 573 aa20.15■□□□□ 0.82
LMNA-217ENST00000498722 POLLQ9UGP5 575 aa20.15■□□□□ 0.82
LMNA-217ENST00000498722 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
LMNA-217ENST00000498722 HDAC5Q9UQL6 1122 aa20.15■□□□□ 0.82
LMNA-217ENST00000498722 GLTPD2A6NH11 291 aa20.14■□□□□ 0.81
LMNA-217ENST00000498722 GNAI3P08754 354 aa20.14■□□□□ 0.81
LMNA-217ENST00000498722 ITPRIPQ8IWB1 547 aa20.14■□□□□ 0.81
LMNA-217ENST00000498722 ANKRD44Q8N8A2 993 aa20.14■□□□□ 0.81
LMNA-217ENST00000498722 TBC1D16Q8TBP0 767 aa20.14■□□□□ 0.81
LMNA-217ENST00000498722 GPR101Q96P66 508 aaPredicted RBP20.14■□□□□ 0.81
LMNA-217ENST00000498722 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
LMNA-217ENST00000498722 CHMP4BQ9H444 224 aaKnown RBP20.14■□□□□ 0.81
LMNA-217ENST00000498722 CNNM1Q9NRU3 951 aa20.14■□□□□ 0.81
LMNA-217ENST00000498722 LRRFIP2Q9Y608 721 aaKnown RBP20.14■□□□□ 0.81
LMNA-217ENST00000498722 G3V3G9 751 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 RLBP1P12271 317 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 EIF6P56537 245 aaKnown RBP20.13■□□□□ 0.81
LMNA-217ENST00000498722 KIAA2012Q0VF49 1180 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 RABL6Q3YEC7 729 aaPredicted RBP20.13■□□□□ 0.81
LMNA-217ENST00000498722 DCAF8Q5TAQ9 597 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 LDHAL6AQ6ZMR3 332 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 NMRK2Q9NPI5 230 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 PODXL2Q9NZ53 605 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 DDX19BQ9UMR2 479 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
LMNA-217ENST00000498722 SCN4AP35499 1836 aa20.12■□□□□ 0.81
LMNA-217ENST00000498722 KCNJ4P48050 445 aa20.12■□□□□ 0.81
LMNA-217ENST00000498722 WDR90Q96KV7 1748 aa20.12■□□□□ 0.81
LMNA-217ENST00000498722 DDNO94850 711 aaPredicted RBP20.11■□□□□ 0.81
LMNA-217ENST00000498722 ATP2B4P23634 1241 aa20.11■□□□□ 0.81
LMNA-217ENST00000498722 CHRNDQ07001 517 aa20.11■□□□□ 0.81
LMNA-217ENST00000498722 ZC3H12CQ9C0D7 883 aaKnown RBP20.11■□□□□ 0.81
LMNA-217ENST00000498722 ANKRD2Q9GZV1 360 aa20.11■□□□□ 0.81
LMNA-217ENST00000498722 RRAGCQ9HB90 399 aa20.11■□□□□ 0.81
LMNA-217ENST00000498722 GJA3Q9Y6H8 435 aa20.11■□□□□ 0.81
LMNA-217ENST00000498722 SCN9AQ15858 1988 aa20.1■□□□□ 0.81
LMNA-217ENST00000498722 FZD9O00144 591 aa20.1■□□□□ 0.81
LMNA-217ENST00000498722 CENPQQ7L2Z9 268 aaPredicted RBP20.1■□□□□ 0.81
LMNA-217ENST00000498722 HELBQ8NG08 1087 aaPredicted RBP20.1■□□□□ 0.81
LMNA-217ENST00000498722 DBNDD1Q9H9R9 158 aa20.1■□□□□ 0.81
LMNA-217ENST00000498722 PSME4Q14997 1843 aa20.1■□□□□ 0.81
LMNA-217ENST00000498722 ZNRF3Q9ULT6 936 aa20.09■□□□□ 0.81
LMNA-217ENST00000498722 TAF5LO75529 589 aa20.08■□□□□ 0.81
LMNA-217ENST00000498722 DOK7Q18PE1 504 aa20.08■□□□□ 0.81
LMNA-217ENST00000498722 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
LMNA-217ENST00000498722 KLHDC4Q8TBB5 520 aa20.08■□□□□ 0.81
LMNA-217ENST00000498722 GNAI2P04899 355 aa20.07■□□□□ 0.8
LMNA-217ENST00000498722 PUS3Q9BZE2 481 aaKnown RBP20.07■□□□□ 0.8
LMNA-217ENST00000498722 LEMD3Q9Y2U8 911 aa20.07■□□□□ 0.8
LMNA-217ENST00000498722 ZNF804BA4D1E1 1349 aa20.07■□□□□ 0.8
LMNA-217ENST00000498722 WTIPA6NIX2 430 aaPredicted RBP20.06■□□□□ 0.8
LMNA-217ENST00000498722 ECE2O60344 883 aa20.06■□□□□ 0.8
LMNA-217ENST00000498722 RAD17O75943 681 aa20.06■□□□□ 0.8
LMNA-217ENST00000498722 GPC2Q8N158 579 aa20.06■□□□□ 0.8
LMNA-217ENST00000498722 VEGFAP15692 232 aaPredicted RBP20.05■□□□□ 0.8
LMNA-217ENST00000498722 MYH13Q9UKX3 1938 aa20.05■□□□□ 0.8
LMNA-217ENST00000498722 MED23Q9ULK4 1368 aa20.05■□□□□ 0.8
LMNA-217ENST00000498722 KIF3CO14782 793 aa20.04■□□□□ 0.8
LMNA-217ENST00000498722 CXCL9Q07325 125 aa20.04■□□□□ 0.8
LMNA-217ENST00000498722 LRRC24Q50LG9 513 aa20.04■□□□□ 0.8
LMNA-217ENST00000498722 METTL24Q5JXM2 366 aa20.04■□□□□ 0.8
LMNA-217ENST00000498722 CIAPIN1Q6FI81 312 aa20.04■□□□□ 0.8
LMNA-217ENST00000498722 SIL1Q9H173 461 aa20.04■□□□□ 0.8
LMNA-217ENST00000498722 MROH5Q6ZUA9 1318 aa20.04■□□□□ 0.8
LMNA-217ENST00000498722 YDJCA8MPS7 323 aa20.03■□□□□ 0.8
LMNA-217ENST00000498722 SNAP23O00161 211 aa20.03■□□□□ 0.8
LMNA-217ENST00000498722 SRGAP3O43295 1099 aa20.03■□□□□ 0.8
LMNA-217ENST00000498722 TNIP1Q15025 636 aa20.03■□□□□ 0.8
LMNA-217ENST00000498722 C1orf115Q9H7X2 142 aa20.03■□□□□ 0.8
LMNA-217ENST00000498722 IQCA1LA6NCM1 817 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms