RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 A0A1B0GUL6 1792 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 YDJCA8MPS7 323 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 RAD17O75943 681 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 ITGBL1O95965 494 aaPredicted RBP10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 TNIP1Q15025 636 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 MAP1SQ66K74 1059 aaPredicted RBP10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 USP50Q70EL3 339 aaPredicted RBP10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 JMYQ8N9B5 988 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 PODXL2Q9NZ53 605 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 GPRC5DQ9NZD1 345 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 ANKIB1Q9P2G1 1089 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 ZNF521Q96K83 1311 aa10.82□□□□□ -0.68
HMGXB4-207ENST00000498212 POLR2AP24928 1970 aaKnown RBP10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 H7C1W4 665 aa10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 GMPSP49915 693 aaPredicted RBP10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 GCKRQ14397 625 aa10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 CNTROBQ8N137 903 aa10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 LINS1Q8NG48 757 aa10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 TTLL11Q8NHH1 800 aa10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 TBC1D16Q8TBP0 767 aa10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 CDC5LQ99459 802 aaKnown RBP10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 BCL2L13Q9BXK5 485 aa10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 DBNDD1Q9H9R9 158 aa10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 ADARB2Q9NS39 739 aaKnown RBP10.81□□□□□ -0.68
HMGXB4-207ENST00000498212 RTL9Q8NET4 1388 aa10.8□□□□□ -0.68
HMGXB4-207ENST00000498212 ECE2O60344 883 aa10.8□□□□□ -0.68
HMGXB4-207ENST00000498212 UFL1O94874 794 aa10.8□□□□□ -0.68
HMGXB4-207ENST00000498212 GPR101Q96P66 508 aaPredicted RBP10.8□□□□□ -0.68
HMGXB4-207ENST00000498212 ZC3H12CQ9C0D7 883 aaKnown RBP10.8□□□□□ -0.68
HMGXB4-207ENST00000498212 GREM2Q9H772 168 aa10.8□□□□□ -0.68
HMGXB4-207ENST00000498212 GGA1Q9UJY5 639 aa10.8□□□□□ -0.68
HMGXB4-207ENST00000498212 ZNF646O15015 1829 aaPredicted RBP10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 TMEM88BA6NKF7 163 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 F6X3S4 739 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 G3V3G9 751 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 PSMD14O00487 310 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 CASP7P55210 303 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 DOK7Q18PE1 504 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 PLA2G12BQ9BX93 195 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 XDHP47989 1333 aa10.79□□□□□ -0.68
HMGXB4-207ENST00000498212 ATP2B4P23634 1241 aa10.78□□□□□ -0.68
HMGXB4-207ENST00000498212 IGHMBP2P38935 993 aaKnown RBP10.78□□□□□ -0.68
HMGXB4-207ENST00000498212 BEND3Q5T5X7 828 aa10.78□□□□□ -0.68
HMGXB4-207ENST00000498212 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
HMGXB4-207ENST00000498212 MKRN1Q9UHC7 482 aaKnown RBP10.78□□□□□ -0.68
HMGXB4-207ENST00000498212 CNOT7Q9UIV1 285 aaKnown RBP10.78□□□□□ -0.68
HMGXB4-207ENST00000498212 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
HMGXB4-207ENST00000498212 CNTNAP1P78357 1384 aa10.77□□□□□ -0.68
HMGXB4-207ENST00000498212 E9PSI1 815 aa10.77□□□□□ -0.69
HMGXB4-207ENST00000498212 H7C1D1 291 aa10.77□□□□□ -0.69
HMGXB4-207ENST00000498212 CSF1RP07333 972 aa10.77□□□□□ -0.69
HMGXB4-207ENST00000498212 ITGA6P23229 1130 aa10.77□□□□□ -0.69
HMGXB4-207ENST00000498212 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
HMGXB4-207ENST00000498212 DPF2Q92785 391 aa10.77□□□□□ -0.69
HMGXB4-207ENST00000498212 KCNQ5Q9NR82 932 aa10.77□□□□□ -0.69
HMGXB4-207ENST00000498212 MINPP1Q9UNW1 487 aa10.77□□□□□ -0.69
HMGXB4-207ENST00000498212 SHTN1A0MZ66 631 aa10.76□□□□□ -0.69
HMGXB4-207ENST00000498212 CCER2I3L3R5 266 aa10.76□□□□□ -0.69
HMGXB4-207ENST00000498212 RPS12P25398 132 aaKnown RBP10.76□□□□□ -0.69
HMGXB4-207ENST00000498212 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
HMGXB4-207ENST00000498212 SLC4A10Q6U841 1118 aa10.76□□□□□ -0.69
HMGXB4-207ENST00000498212 TRPM4Q8TD43 1214 aa10.76□□□□□ -0.69
HMGXB4-207ENST00000498212 MPHOSPH8Q99549 860 aa10.76□□□□□ -0.69
HMGXB4-207ENST00000498212 MED23Q9ULK4 1368 aa10.76□□□□□ -0.69
HMGXB4-207ENST00000498212 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 VIL1P09327 827 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 HSPA1AP0DMV8 641 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 HSPA1BP0DMV9 641 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 CCT4P50991 539 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 HIRAP54198 1017 aaPredicted RBP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 FMR1Q06787 632 aaKnown RBP eCLIP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 ZC3H15Q8WU90 426 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 PGAP2Q9UHJ9 254 aa10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 ABT1Q9ULW3 272 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 ZNF609O15014 1411 aa10.75□□□□□ -0.69
HMGXB4-207ENST00000498212 GRM8O00222 908 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 TRAF5O00463 557 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 FOXO4P98177 505 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 IFIT5Q13325 482 aaKnown RBP10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 DEFB115Q30KQ5 88 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 SAMD7Q7Z3H4 446 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 PODNQ7Z5L7 613 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 REM2Q8IYK8 340 aaPredicted RBP10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 MRPL50Q8N5N7 158 aaKnown RBP10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 SRCIN1Q9C0H9 1055 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 ANKRD2Q9GZV1 360 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 C9orf78Q9NZ63 289 aaPredicted RBP10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 LEMD3Q9Y2U8 911 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 CHMP3Q9Y3E7 222 aa10.74□□□□□ -0.69
HMGXB4-207ENST00000498212 THSD7BQ9C0I4 1608 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 ECM29Q5VYK3 1845 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 WTIPA6NIX2 430 aaPredicted RBP10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 RASSF10A6NK89 507 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms