RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 ZNF594Q96JF6 807 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-215ENST00000498160 CCDC136Q96JN2 1154 aa21.72■■□□□ 1.07
CTDSP1-215ENST00000498160 ZBTB47Q9UFB7 747 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-215ENST00000498160 RIPOR2Q9Y4F9 1068 aa21.72■■□□□ 1.07
CTDSP1-215ENST00000498160 SPEF2Q9C093 1822 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 CCDC93Q567U6 631 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 RTKN2Q8IZC4 609 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 KIF1BPQ96EK5 621 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 CEP126Q9P2H0 1117 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 PA2G4Q9UQ80 394 aaKnown RBP21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 AKAP2Q9Y2D5 859 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 XDHP47989 1333 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 ARFGEF1Q9Y6D6 1849 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 CACNA1SQ13698 1873 aa21.71■■□□□ 1.07
CTDSP1-215ENST00000498160 METTL24Q5JXM2 366 aa21.7■■□□□ 1.06
CTDSP1-215ENST00000498160 KLHDC4Q8TBB5 520 aa21.7■■□□□ 1.06
CTDSP1-215ENST00000498160 SIL1Q9H173 461 aa21.7■■□□□ 1.06
CTDSP1-215ENST00000498160 PODXL2Q9NZ53 605 aa21.7■■□□□ 1.06
CTDSP1-215ENST00000498160 MINPP1Q9UNW1 487 aa21.7■■□□□ 1.06
CTDSP1-215ENST00000498160 SLX4Q8IY92 1834 aa21.7■■□□□ 1.06
CTDSP1-215ENST00000498160 TAF1P21675 1872 aa21.69■■□□□ 1.06
CTDSP1-215ENST00000498160 CHRNDQ07001 517 aa21.69■■□□□ 1.06
CTDSP1-215ENST00000498160 ATG9AQ7Z3C6 839 aa21.69■■□□□ 1.06
CTDSP1-215ENST00000498160 SUPT20HQ8NEM7 779 aa21.69■■□□□ 1.06
CTDSP1-215ENST00000498160 GPR108Q9NPR9 543 aa21.69■■□□□ 1.06
CTDSP1-215ENST00000498160 LEMD3Q9Y2U8 911 aa21.69■■□□□ 1.06
CTDSP1-215ENST00000498160 ATP2B4P23634 1241 aa21.68■■□□□ 1.06
CTDSP1-215ENST00000498160 LRRC24Q50LG9 513 aa21.68■■□□□ 1.06
CTDSP1-215ENST00000498160 CENPQQ7L2Z9 268 aaPredicted RBP21.68■■□□□ 1.06
CTDSP1-215ENST00000498160 SMC5Q8IY18 1101 aa21.68■■□□□ 1.06
CTDSP1-215ENST00000498160 C7orf43Q8WVR3 580 aa21.68■■□□□ 1.06
CTDSP1-215ENST00000498160 ANKIB1Q9P2G1 1089 aa21.68■■□□□ 1.06
CTDSP1-215ENST00000498160 BCS1LQ9Y276 419 aa21.68■■□□□ 1.06
CTDSP1-215ENST00000498160 EXOC6BQ9Y2D4 811 aa21.68■■□□□ 1.06
CTDSP1-215ENST00000498160 PDE8BO95263 885 aa21.67■■□□□ 1.06
CTDSP1-215ENST00000498160 UBE4AQ14139 1066 aa21.67■■□□□ 1.06
CTDSP1-215ENST00000498160 MPNDQ8N594 471 aa21.67■■□□□ 1.06
CTDSP1-215ENST00000498160 PUS3Q9BZE2 481 aaKnown RBP21.67■■□□□ 1.06
CTDSP1-215ENST00000498160 LRRCC1Q9C099 1032 aa21.67■■□□□ 1.06
CTDSP1-215ENST00000498160 PUM3Q15397 648 aaKnown RBP21.66■■□□□ 1.06
CTDSP1-215ENST00000498160 DPP8Q6V1X1 898 aaPredicted RBP21.66■■□□□ 1.06
CTDSP1-215ENST00000498160 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
CTDSP1-215ENST00000498160 VPS33BQ9H267 617 aa21.66■■□□□ 1.06
CTDSP1-215ENST00000498160 GGA1Q9UJY5 639 aa21.66■■□□□ 1.06
CTDSP1-215ENST00000498160 C21orf2O43822 256 aa21.65■■□□□ 1.06
CTDSP1-215ENST00000498160 KCNJ4P48050 445 aa21.65■■□□□ 1.06
CTDSP1-215ENST00000498160 CLASRPQ8N2M8 674 aaKnown RBP21.65■■□□□ 1.06
CTDSP1-215ENST00000498160 PSMD1Q99460 953 aa21.65■■□□□ 1.06
CTDSP1-215ENST00000498160 EYA3Q99504 573 aa21.65■■□□□ 1.06
CTDSP1-215ENST00000498160 NSFL1CQ9UNZ2 370 aaKnown RBP21.65■■□□□ 1.06
CTDSP1-215ENST00000498160 COL4A1P02462 1669 aa21.65■■□□□ 1.06
CTDSP1-215ENST00000498160 A0A1B0GUL6 1792 aa21.64■■□□□ 1.06
CTDSP1-215ENST00000498160 IFIT1P09914 478 aaKnown RBP21.64■■□□□ 1.05
CTDSP1-215ENST00000498160 VGLL2Q8N8G2 317 aa21.64■■□□□ 1.05
CTDSP1-215ENST00000498160 LPIN2Q92539 896 aa21.64■■□□□ 1.05
CTDSP1-215ENST00000498160 LTBP3Q9NS15 1303 aa21.63■■□□□ 1.05
CTDSP1-215ENST00000498160 SASH1O94885 1247 aa21.63■■□□□ 1.05
CTDSP1-215ENST00000498160 IGHDP01880 384 aa21.63■■□□□ 1.05
CTDSP1-215ENST00000498160 SLC5A1P13866 664 aa21.63■■□□□ 1.05
CTDSP1-215ENST00000498160 RTFDC1Q9BY42 306 aaPredicted RBP21.63■■□□□ 1.05
CTDSP1-215ENST00000498160 ZNF804BA4D1E1 1349 aa21.62■■□□□ 1.05
CTDSP1-215ENST00000498160 DCAF8L1A6NGE4 600 aa21.62■■□□□ 1.05
CTDSP1-215ENST00000498160 GRIN3BO60391 1043 aa21.62■■□□□ 1.05
CTDSP1-215ENST00000498160 GPSM2P81274 684 aa21.62■■□□□ 1.05
CTDSP1-215ENST00000498160 TFCP2Q12800 502 aa21.62■■□□□ 1.05
CTDSP1-215ENST00000498160 LTBP1Q14766 1721 aa21.62■■□□□ 1.05
CTDSP1-215ENST00000498160 SNED1Q8TER0 1413 aa21.62■■□□□ 1.05
CTDSP1-215ENST00000498160 UFL1O94874 794 aa21.61■■□□□ 1.05
CTDSP1-215ENST00000498160 FKBP4Q02790 459 aaKnown RBP eCLIP21.61■■□□□ 1.052e-6■■■■■ 27
CTDSP1-215ENST00000498160 ATP2B3Q16720 1220 aa21.61■■□□□ 1.05
CTDSP1-215ENST00000498160 C15orf52Q6ZUT6 534 aaKnown RBP21.61■■□□□ 1.05
CTDSP1-215ENST00000498160 MED23Q9ULK4 1368 aa21.61■■□□□ 1.05
CTDSP1-215ENST00000498160 KDM2BQ8NHM5 1336 aa21.6■■□□□ 1.05
CTDSP1-215ENST00000498160 TNNI3KQ59H18 835 aa21.6■■□□□ 1.05
CTDSP1-215ENST00000498160 TBC1D16Q8TBP0 767 aa21.6■■□□□ 1.05
CTDSP1-215ENST00000498160 TAOK3Q9H2K8 898 aa21.6■■□□□ 1.05
CTDSP1-215ENST00000498160 FPGT-TNNI3KV9GXZ4 949 aa21.6■■□□□ 1.05
CTDSP1-215ENST00000498160 ZNF609O15014 1411 aa21.6■■□□□ 1.05
CTDSP1-215ENST00000498160 C6orf229H3BNL8 230 aa21.59■■□□□ 1.05
CTDSP1-215ENST00000498160 FGFR2P21802 821 aa21.59■■□□□ 1.05
CTDSP1-215ENST00000498160 FER1L6Q2WGJ9 1857 aa21.59■■□□□ 1.05
CTDSP1-215ENST00000498160 ANKRD45Q5TZF3 282 aa21.59■■□□□ 1.05
CTDSP1-215ENST00000498160 ZNF219Q9P2Y4 722 aaPredicted RBP21.59■■□□□ 1.05
CTDSP1-215ENST00000498160 ARAP2Q8WZ64 1704 aa21.58■■□□□ 1.05
CTDSP1-215ENST00000498160 TAF5LO75529 589 aa21.58■■□□□ 1.05
CTDSP1-215ENST00000498160 IFIT2P09913 472 aaKnown RBP21.58■■□□□ 1.05
CTDSP1-215ENST00000498160 NUCB1Q02818 461 aa21.58■■□□□ 1.05
CTDSP1-215ENST00000498160 GPR162Q16538 588 aa21.58■■□□□ 1.05
CTDSP1-215ENST00000498160 CAVIN4Q5BKX8 364 aa21.58■■□□□ 1.05
CTDSP1-215ENST00000498160 HELBQ8NG08 1087 aaPredicted RBP21.58■■□□□ 1.05
CTDSP1-215ENST00000498160 A0A1B0GUL7 405 aa21.57■■□□□ 1.04
CTDSP1-215ENST00000498160 APBB1O00213 710 aa21.57■■□□□ 1.04
CTDSP1-215ENST00000498160 ZBTB22O15209 634 aa21.57■■□□□ 1.04
CTDSP1-215ENST00000498160 CHD1LQ86WJ1 897 aa21.57■■□□□ 1.04
CTDSP1-215ENST00000498160 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
CTDSP1-215ENST00000498160 ZC3H12CQ9C0D7 883 aaKnown RBP21.57■■□□□ 1.04
CTDSP1-215ENST00000498160 DUOX1Q9NRD9 1551 aa21.57■■□□□ 1.04
CTDSP1-215ENST00000498160 WASHC4Q2M389 1173 aa21.56■■□□□ 1.04
CTDSP1-215ENST00000498160 B4GALNT3Q6L9W6 998 aa21.56■■□□□ 1.04
CTDSP1-215ENST00000498160 ZNF804AQ7Z570 1209 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms