RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 MINPP1Q9UNW1 487 aa19.94■□□□□ 0.78
SSBP1-214ENST00000498107 SPEF2Q9C093 1822 aa19.94■□□□□ 0.78
SSBP1-214ENST00000498107 SBF1O95248 1867 aa19.94■□□□□ 0.78
SSBP1-214ENST00000498107 COL4A1P02462 1669 aa19.94■□□□□ 0.78
SSBP1-214ENST00000498107 GPSM2P81274 684 aa19.93■□□□□ 0.78
SSBP1-214ENST00000498107 C9orf131Q5VYM1 1079 aa19.93■□□□□ 0.78
SSBP1-214ENST00000498107 ZNF594Q96JF6 807 aaPredicted RBP19.93■□□□□ 0.78
SSBP1-214ENST00000498107 EYA3Q99504 573 aa19.93■□□□□ 0.78
SSBP1-214ENST00000498107 RNF181Q9P0P0 153 aa19.93■□□□□ 0.78
SSBP1-214ENST00000498107 GGA1Q9UJY5 639 aa19.93■□□□□ 0.78
SSBP1-214ENST00000498107 FBXO3Q9UK99 471 aa19.93■□□□□ 0.78
SSBP1-214ENST00000498107 SRGAP3O43295 1099 aa19.92■□□□□ 0.78
SSBP1-214ENST00000498107 ATP2B4P23634 1241 aa19.92■□□□□ 0.78
SSBP1-214ENST00000498107 IARSP41252 1262 aaKnown RBP19.92■□□□□ 0.78
SSBP1-214ENST00000498107 ZC3H4Q9UPT8 1303 aaKnown RBP19.92■□□□□ 0.78
SSBP1-214ENST00000498107 UTRNP46939 3433 aa19.91■□□□□ 0.78
SSBP1-214ENST00000498107 CCDC88AQ3V6T2 1871 aa19.91■□□□□ 0.78
SSBP1-214ENST00000498107 C6orf229H3BNL8 230 aa19.91■□□□□ 0.78
SSBP1-214ENST00000498107 RFX5P48382 616 aaPredicted RBP19.91■□□□□ 0.78
SSBP1-214ENST00000498107 JDP2Q8WYK2 163 aa19.91■□□□□ 0.78
SSBP1-214ENST00000498107 ZNF277Q9NRM2 450 aaPredicted RBP19.91■□□□□ 0.78
SSBP1-214ENST00000498107 LEMD3Q9Y2U8 911 aa19.91■□□□□ 0.78
SSBP1-214ENST00000498107 MROH5Q6ZUA9 1318 aa19.91■□□□□ 0.78
SSBP1-214ENST00000498107 UFL1O94874 794 aa19.9■□□□□ 0.78
SSBP1-214ENST00000498107 CHRNDQ07001 517 aa19.9■□□□□ 0.78
SSBP1-214ENST00000498107 TBC1D16Q8TBP0 767 aa19.9■□□□□ 0.78
SSBP1-214ENST00000498107 ZBTB40Q9NUA8 1239 aa19.9■□□□□ 0.78
SSBP1-214ENST00000498107 DICER1Q9UPY3 1922 aaKnown RBP19.9■□□□□ 0.78
SSBP1-214ENST00000498107 EYA2O00167 538 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 PPIP5K2O43314 1243 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 KCNJ4P48050 445 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 ATP8B2P98198 1209 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 PTPN12Q05209 780 aaKnown RBP19.89■□□□□ 0.77
SSBP1-214ENST00000498107 WASHC4Q2M389 1173 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 SLC51AQ86UW1 340 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 LARGE2Q8N3Y3 721 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 C1orf115Q9H7X2 142 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 COPRSQ9NQ92 184 aa19.89■□□□□ 0.77
SSBP1-214ENST00000498107 SUPT16HQ9Y5B9 1047 aaKnown RBP19.89■□□□□ 0.77
SSBP1-214ENST00000498107 LTBP1Q14766 1721 aa19.88■□□□□ 0.77
SSBP1-214ENST00000498107 CIAO1O76071 339 aa19.88■□□□□ 0.77
SSBP1-214ENST00000498107 KIAA2012Q0VF49 1180 aa19.88■□□□□ 0.77
SSBP1-214ENST00000498107 RPAP2Q8IXW5 612 aaPredicted RBP19.88■□□□□ 0.77
SSBP1-214ENST00000498107 ZC3H12CQ9C0D7 883 aaKnown RBP19.88■□□□□ 0.77
SSBP1-214ENST00000498107 POLLQ9UGP5 575 aa19.88■□□□□ 0.77
SSBP1-214ENST00000498107 RIPOR2Q9Y4F9 1068 aa19.88■□□□□ 0.77
SSBP1-214ENST00000498107 PRELPP51888 382 aa19.87■□□□□ 0.77
SSBP1-214ENST00000498107 NIM1KQ8IY84 436 aa19.87■□□□□ 0.77
SSBP1-214ENST00000498107 KLHDC4Q8TBB5 520 aa19.87■□□□□ 0.77
SSBP1-214ENST00000498107 DUOX1Q9NRD9 1551 aa19.87■□□□□ 0.77
SSBP1-214ENST00000498107 ZNF804BA4D1E1 1349 aa19.86■□□□□ 0.77
SSBP1-214ENST00000498107 PNMA6EA0A0J9YXQ4 647 aa19.86■□□□□ 0.77
SSBP1-214ENST00000498107 HMMRO75330 724 aa19.86■□□□□ 0.77
SSBP1-214ENST00000498107 IL15P40933 162 aaPredicted RBP19.86■□□□□ 0.77
SSBP1-214ENST00000498107 METTL24Q5JXM2 366 aa19.86■□□□□ 0.77
SSBP1-214ENST00000498107 SSH3Q8TE77 659 aa19.86■□□□□ 0.77
SSBP1-214ENST00000498107 PUS3Q9BZE2 481 aaKnown RBP19.86■□□□□ 0.77
SSBP1-214ENST00000498107 G3V3G9 751 aa19.85■□□□□ 0.77
SSBP1-214ENST00000498107 AAMPQ13685 434 aa19.85■□□□□ 0.77
SSBP1-214ENST00000498107 POLA2Q14181 598 aa19.85■□□□□ 0.77
SSBP1-214ENST00000498107 AOC3Q16853 763 aa19.85■□□□□ 0.77
SSBP1-214ENST00000498107 LRRC24Q50LG9 513 aa19.85■□□□□ 0.77
SSBP1-214ENST00000498107 DCAF8Q5TAQ9 597 aa19.85■□□□□ 0.77
SSBP1-214ENST00000498107 CEP85Q6P2H3 762 aa19.85■□□□□ 0.77
SSBP1-214ENST00000498107 MED23Q9ULK4 1368 aa19.84■□□□□ 0.77
SSBP1-214ENST00000498107 TAF5LO75529 589 aa19.84■□□□□ 0.77
SSBP1-214ENST00000498107 G3BP1Q13283 466 aaKnown RBP eCLIP19.84■□□□□ 0.77
SSBP1-214ENST00000498107 UBE4AQ14139 1066 aa19.84■□□□□ 0.77
SSBP1-214ENST00000498107 DPY19L2Q6NUT2 758 aa19.84■□□□□ 0.77
SSBP1-214ENST00000498107 HELBQ8NG08 1087 aaPredicted RBP19.84■□□□□ 0.77
SSBP1-214ENST00000498107 SIL1Q9H173 461 aa19.84■□□□□ 0.77
SSBP1-214ENST00000498107 TIAM2Q8IVF5 1701 aa19.84■□□□□ 0.77
SSBP1-214ENST00000498107 RIMBP2O15034 1052 aa19.83■□□□□ 0.77
SSBP1-214ENST00000498107 PDE8BO95263 885 aa19.83■□□□□ 0.77
SSBP1-214ENST00000498107 EIF6P56537 245 aaKnown RBP19.83■□□□□ 0.77
SSBP1-214ENST00000498107 CEP126Q9P2H0 1117 aa19.83■□□□□ 0.77
SSBP1-214ENST00000498107 ZNRF3Q9ULT6 936 aa19.83■□□□□ 0.77
SSBP1-214ENST00000498107 PA2G4Q9UQ80 394 aaKnown RBP19.83■□□□□ 0.77
SSBP1-214ENST00000498107 A0A1B0GUL6 1792 aa19.83■□□□□ 0.76
SSBP1-214ENST00000498107 FZD9O00144 591 aa19.82■□□□□ 0.76
SSBP1-214ENST00000498107 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
SSBP1-214ENST00000498107 ATG9AQ7Z3C6 839 aa19.82■□□□□ 0.76
SSBP1-214ENST00000498107 CRBNQ96SW2 442 aa19.82■□□□□ 0.76
SSBP1-214ENST00000498107 C15orf52Q6ZUT6 534 aaKnown RBP19.81■□□□□ 0.76
SSBP1-214ENST00000498107 KDM2BQ8NHM5 1336 aa19.8■□□□□ 0.76
SSBP1-214ENST00000498107 SURF6O75683 361 aaKnown RBP19.8■□□□□ 0.76
SSBP1-214ENST00000498107 OS9Q13438 667 aaPredicted RBP19.8■□□□□ 0.76
SSBP1-214ENST00000498107 PUM3Q15397 648 aaKnown RBP19.8■□□□□ 0.76
SSBP1-214ENST00000498107 HSP90AB4PQ58FF6 505 aa19.8■□□□□ 0.76
SSBP1-214ENST00000498107 VGLL2Q8N8G2 317 aa19.8■□□□□ 0.76
SSBP1-214ENST00000498107 GPR101Q96P66 508 aaPredicted RBP19.8■□□□□ 0.76
SSBP1-214ENST00000498107 NOP58Q9Y2X3 529 aaKnown RBP19.8■□□□□ 0.76
SSBP1-214ENST00000498107 GLTPD2A6NH11 291 aa19.79■□□□□ 0.76
SSBP1-214ENST00000498107 IFIT1P09914 478 aaKnown RBP19.79■□□□□ 0.76
SSBP1-214ENST00000498107 PODNQ7Z5L7 613 aa19.79■□□□□ 0.76
SSBP1-214ENST00000498107 COA1Q9GZY4 146 aa19.79■□□□□ 0.76
SSBP1-214ENST00000498107 AKAP2Q9Y2D5 859 aa19.79■□□□□ 0.76
SSBP1-214ENST00000498107 ECE2O60344 883 aa19.78■□□□□ 0.76
SSBP1-214ENST00000498107 TNIP1Q15025 636 aa19.78■□□□□ 0.76
SSBP1-214ENST00000498107 ZNF804AQ7Z570 1209 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms