RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	CDC5L	Q99459	802 aa	Known RBP	18.6	■□□□□ 0.57
IVD-209	ENST00000497816	EYA3	Q99504	573 aa		18.6	■□□□□ 0.57
IVD-209	ENST00000497816	GPRC5D	Q9NZD1	345 aa		18.6	■□□□□ 0.57
IVD-209	ENST00000497816	GMPS	P49915	693 aa	Predicted RBP	18.59	■□□□□ 0.57
IVD-209	ENST00000497816	DBNDD1	Q9H9R9	158 aa		18.59	■□□□□ 0.57
IVD-209	ENST00000497816	ANKIB1	Q9P2G1	1089 aa		18.59	■□□□□ 0.57
IVD-209	ENST00000497816	CLEC11A	Q9Y240	323 aa		18.59	■□□□□ 0.57
IVD-209	ENST00000497816	ZNF646	O15015	1829 aa	Predicted RBP	18.59	■□□□□ 0.57
IVD-209	ENST00000497816	UFL1	O94874	794 aa		18.59	■□□□□ 0.57
IVD-209	ENST00000497816	TNIP1	Q15025	636 aa		18.59	■□□□□ 0.57
IVD-209	ENST00000497816	GGA1	Q9UJY5	639 aa		18.59	■□□□□ 0.57
IVD-209	ENST00000497816	PCNT	O95613	3336 aa		18.58	■□□□□ 0.56
IVD-209	ENST00000497816	ECE2	O60344	883 aa		18.58	■□□□□ 0.56
IVD-209	ENST00000497816	CSF1R	P07333	972 aa		18.58	■□□□□ 0.56
IVD-209	ENST00000497816	MAP1S	Q66K74	1059 aa	Predicted RBP	18.58	■□□□□ 0.56
IVD-209	ENST00000497816	USP50	Q70EL3	339 aa	Predicted RBP	18.58	■□□□□ 0.56
IVD-209	ENST00000497816	BSDC1	Q9NW68	430 aa	Predicted RBP	18.58	■□□□□ 0.56
IVD-209	ENST00000497816	XDH	P47989	1333 aa		18.58	■□□□□ 0.56
IVD-209	ENST00000497816	DOK7	Q18PE1	504 aa		18.57	■□□□□ 0.56
IVD-209	ENST00000497816	FAM161A	Q3B820	660 aa		18.57	■□□□□ 0.56
IVD-209	ENST00000497816	JMY	Q8N9B5	988 aa		18.57	■□□□□ 0.56
IVD-209	ENST00000497816	CDCA7L	Q96GN5	454 aa		18.57	■□□□□ 0.56
IVD-209	ENST00000497816	CREBZF	Q9NS37	354 aa		18.57	■□□□□ 0.56
IVD-209	ENST00000497816	ADARB2	Q9NS39	739 aa	Known RBP	18.57	■□□□□ 0.56
IVD-209	ENST00000497816	PSMD14	O00487	310 aa		18.56	■□□□□ 0.56
IVD-209	ENST00000497816	CNTROB	Q8N137	903 aa		18.56	■□□□□ 0.56
IVD-209	ENST00000497816	MRPL50	Q8N5N7	158 aa	Known RBP	18.56	■□□□□ 0.56
IVD-209	ENST00000497816	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.56	■□□□□ 0.56
IVD-209	ENST00000497816	MINPP1	Q9UNW1	487 aa		18.56	■□□□□ 0.56
IVD-209	ENST00000497816	ITGA6	P23229	1130 aa		18.55	■□□□□ 0.56
IVD-209	ENST00000497816	FOXO4	P98177	505 aa		18.55	■□□□□ 0.56
IVD-209	ENST00000497816	TRMT2A	Q8IZ69	625 aa	Known RBP	18.55	■□□□□ 0.56
IVD-209	ENST00000497816	KCNQ5	Q9NR82	932 aa		18.55	■□□□□ 0.56
IVD-209	ENST00000497816	POLR2A	P24928	1970 aa	Known RBP	18.55	■□□□□ 0.56
IVD-209	ENST00000497816	ATP2B4	P23634	1241 aa		18.54	■□□□□ 0.56
IVD-209	ENST00000497816	BCL2L13	Q9BXK5	485 aa		18.54	■□□□□ 0.56
IVD-209	ENST00000497816	SHTN1	A0MZ66	631 aa		18.54	■□□□□ 0.56
IVD-209	ENST00000497816	WTIP	A6NIX2	430 aa	Predicted RBP	18.54	■□□□□ 0.56
IVD-209	ENST00000497816	GRM8	O00222	908 aa		18.54	■□□□□ 0.56
IVD-209	ENST00000497816	ALDH1L1	O75891	902 aa		18.54	■□□□□ 0.56
IVD-209	ENST00000497816	SLC4A10	Q6U841	1118 aa		18.54	■□□□□ 0.56
IVD-209	ENST00000497816	SSH1	Q8WYL5	1049 aa		18.54	■□□□□ 0.56
IVD-209	ENST00000497816	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.54	■□□□□ 0.56
IVD-209	ENST00000497816	IGHMBP2	P38935	993 aa	Known RBP	18.53	■□□□□ 0.56
IVD-209	ENST00000497816	DPF2	Q92785	391 aa		18.53	■□□□□ 0.56
IVD-209	ENST00000497816	CNOT7	Q9UIV1	285 aa	Known RBP	18.53	■□□□□ 0.56
IVD-209	ENST00000497816	MED23	Q9ULK4	1368 aa		18.52	■□□□□ 0.56
IVD-209	ENST00000497816	EPHA10	Q5JZY3	1008 aa		18.52	■□□□□ 0.56
IVD-209	ENST00000497816	MICALL2	Q8IY33	904 aa		18.52	■□□□□ 0.56
IVD-209	ENST00000497816	TRPM4	Q8TD43	1214 aa		18.52	■□□□□ 0.56
IVD-209	ENST00000497816	SRCIN1	Q9C0H9	1055 aa		18.52	■□□□□ 0.56
IVD-209	ENST00000497816	ZNF609	O15014	1411 aa		18.51	■□□□□ 0.55
IVD-209	ENST00000497816	PTPRC	P08575	1304 aa		18.51	■□□□□ 0.55
IVD-209	ENST00000497816	TMEM88B	A6NKF7	163 aa		18.51	■□□□□ 0.55
IVD-209	ENST00000497816	RPS12	P25398	132 aa	Known RBP	18.51	■□□□□ 0.55
IVD-209	ENST00000497816	CCT4	P50991	539 aa	Known RBP	18.51	■□□□□ 0.55
IVD-209	ENST00000497816	HIRA	P54198	1017 aa	Predicted RBP	18.51	■□□□□ 0.55
IVD-209	ENST00000497816	ANKRD18B	A2A2Z9	1011 aa		18.5	■□□□□ 0.55
IVD-209	ENST00000497816	VIL1	P09327	827 aa	Known RBP	18.5	■□□□□ 0.55
IVD-209	ENST00000497816	MPHOSPH8	Q99549	860 aa		18.5	■□□□□ 0.55
IVD-209	ENST00000497816	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.5	■□□□□ 0.55
IVD-209	ENST00000497816	PGAP2	Q9UHJ9	254 aa		18.5	■□□□□ 0.55
IVD-209	ENST00000497816	CNTNAP1	P78357	1384 aa		18.5	■□□□□ 0.55
IVD-209	ENST00000497816		G3V3G9	751 aa		18.49	■□□□□ 0.55
IVD-209	ENST00000497816		H7C1D1	291 aa		18.49	■□□□□ 0.55
IVD-209	ENST00000497816	FMR1	Q06787	632 aa	Known RBP eCLIP	18.49	■□□□□ 0.55
IVD-209	ENST00000497816	ALDH1L2	Q3SY69	923 aa		18.49	■□□□□ 0.55
IVD-209	ENST00000497816	DCAF8	Q5TAQ9	597 aa		18.49	■□□□□ 0.55
IVD-209	ENST00000497816	LMBR1L	Q6UX01	489 aa		18.49	■□□□□ 0.55
IVD-209	ENST00000497816	LEMD3	Q9Y2U8	911 aa		18.49	■□□□□ 0.55
IVD-209	ENST00000497816	UTY	O14607	1347 aa		18.49	■□□□□ 0.55
IVD-209	ENST00000497816	IFIT5	Q13325	482 aa	Known RBP	18.49	■□□□□ 0.55
IVD-209	ENST00000497816	MKRN1	Q9UHC7	482 aa	Known RBP	18.49	■□□□□ 0.55
IVD-209	ENST00000497816	CHRND	Q07001	517 aa		18.48	■□□□□ 0.55
IVD-209	ENST00000497816	SAMD7	Q7Z3H4	446 aa		18.48	■□□□□ 0.55
IVD-209	ENST00000497816	PODN	Q7Z5L7	613 aa		18.48	■□□□□ 0.55
IVD-209	ENST00000497816	ZC3H15	Q8WU90	426 aa	Known RBP	18.48	■□□□□ 0.55
IVD-209	ENST00000497816	KAZALD1	Q96I82	304 aa		18.48	■□□□□ 0.55
IVD-209	ENST00000497816	ANKRD2	Q9GZV1	360 aa		18.48	■□□□□ 0.55
IVD-209	ENST00000497816	CHMP3	Q9Y3E7	222 aa		18.48	■□□□□ 0.55
IVD-209	ENST00000497816	TRAF5	O00463	557 aa		18.47	■□□□□ 0.55
IVD-209	ENST00000497816	EGFR	P00533	1210 aa		18.47	■□□□□ 0.55
IVD-209	ENST00000497816	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.47	■□□□□ 0.55
IVD-209	ENST00000497816	TXNRD3	Q86VQ6	643 aa		18.47	■□□□□ 0.55
IVD-209	ENST00000497816	MIER1	Q8N108	512 aa		18.47	■□□□□ 0.55
IVD-209	ENST00000497816	SUCLG2	Q96I99	432 aa		18.47	■□□□□ 0.55
IVD-209	ENST00000497816	ZNF804B	A4D1E1	1349 aa		18.46	■□□□□ 0.55
IVD-209	ENST00000497816	CT47B1	P0C2W7	299 aa	Predicted RBP	18.46	■□□□□ 0.55
IVD-209	ENST00000497816	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.46	■□□□□ 0.55
IVD-209	ENST00000497816	SMC4	Q9NTJ3	1288 aa		18.46	■□□□□ 0.55
IVD-209	ENST00000497816	KLRK1	P26718	216 aa		18.45	■□□□□ 0.54
IVD-209	ENST00000497816	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.45	■□□□□ 0.54
IVD-209	ENST00000497816	AGBL3	Q8NEM8	1001 aa		18.45	■□□□□ 0.54
IVD-209	ENST00000497816	ZNF594	Q96JF6	807 aa	Predicted RBP	18.45	■□□□□ 0.54
IVD-209	ENST00000497816	GML	Q99445	158 aa		18.45	■□□□□ 0.54
IVD-209	ENST00000497816	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.45	■□□□□ 0.54
IVD-209	ENST00000497816	IRS2	Q9Y4H2	1338 aa		18.45	■□□□□ 0.54
IVD-209	ENST00000497816	USP17L3	A6NCW0	530 aa		18.44	■□□□□ 0.54
IVD-209	ENST00000497816	USP17L4	A6NCW7	530 aa		18.44	■□□□□ 0.54
IVD-209	ENST00000497816	CCDC57	Q2TAC2	916 aa		18.44	■□□□□ 0.54

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