RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 KRT26Q7Z3Y9 468 aa28.29■■■□□ 2.12
CLIC4-204ENST00000497755 EYA3Q99504 573 aa28.29■■■□□ 2.12
CLIC4-204ENST00000497755 DDX10Q13206 875 aaKnown RBP28.28■■■□□ 2.12
CLIC4-204ENST00000497755 RBM26Q5T8P6 1007 aaKnown RBP28.28■■■□□ 2.12
CLIC4-204ENST00000497755 MCOLN1Q9GZU1 580 aa28.27■■■□□ 2.12
CLIC4-204ENST00000497755 MBIPQ9NS73 344 aa28.27■■■□□ 2.12
CLIC4-204ENST00000497755 ZBTB38Q8NAP3 1195 aaPredicted RBP28.26■■■□□ 2.11
CLIC4-204ENST00000497755 SEC31BQ9NQW1 1179 aa28.26■■■□□ 2.11
CLIC4-204ENST00000497755 FAM155AB1AL88 458 aaPredicted RBP28.25■■■□□ 2.11
CLIC4-204ENST00000497755 VIL1P09327 827 aaKnown RBP28.25■■■□□ 2.11
CLIC4-204ENST00000497755 RIC3Q7Z5B4 369 aa28.25■■■□□ 2.11
CLIC4-204ENST00000497755 DCPSQ96C86 337 aaKnown RBP28.25■■■□□ 2.11
CLIC4-204ENST00000497755 ZC3H12CQ9C0D7 883 aaKnown RBP28.25■■■□□ 2.11
CLIC4-204ENST00000497755 GBA2Q9HCG7 927 aaPredicted RBP28.25■■■□□ 2.11
CLIC4-204ENST00000497755 PODXL2Q9NZ53 605 aa28.25■■■□□ 2.11
CLIC4-204ENST00000497755 SCN9AQ15858 1988 aa28.24■■■□□ 2.11
CLIC4-204ENST00000497755 ADM5C9JUS6 153 aa28.24■■■□□ 2.11
CLIC4-204ENST00000497755 ZNF853P0CG23 659 aa28.24■■■□□ 2.11
CLIC4-204ENST00000497755 MLLT1Q03111 559 aaPredicted RBP28.24■■■□□ 2.11
CLIC4-204ENST00000497755 RGMBQ6NW40 437 aa28.24■■■□□ 2.11
CLIC4-204ENST00000497755 PHAXQ9H814 394 aaKnown RBP28.24■■■□□ 2.11
CLIC4-204ENST00000497755 C2orf69Q8N8R5 385 aa28.23■■■□□ 2.11
CLIC4-204ENST00000497755 GOLGA2Q08379 1002 aa28.21■■■□□ 2.11
CLIC4-204ENST00000497755 KIF4BQ2VIQ3 1234 aa28.21■■■□□ 2.11
CLIC4-204ENST00000497755 DGKZQ13574 1117 aa28.2■■■□□ 2.1
CLIC4-204ENST00000497755 CCDC102AQ96A19 550 aa28.2■■■□□ 2.1
CLIC4-204ENST00000497755 MYD88Q99836 296 aa28.2■■■□□ 2.1
CLIC4-204ENST00000497755 ANKIB1Q9P2G1 1089 aa28.2■■■□□ 2.1
CLIC4-204ENST00000497755 ASTN2O75129 1339 aaPredicted RBP28.19■■■□□ 2.1
CLIC4-204ENST00000497755 ELL2O00472 640 aaPredicted RBP28.19■■■□□ 2.1
CLIC4-204ENST00000497755 UFL1O94874 794 aa28.19■■■□□ 2.1
CLIC4-204ENST00000497755 PCCAP05165 728 aaPredicted RBP28.18■■■□□ 2.1
CLIC4-204ENST00000497755 HSP90B1P14625 803 aaKnown RBP28.18■■■□□ 2.1
CLIC4-204ENST00000497755 ZNF157P51786 506 aaPredicted RBP28.18■■■□□ 2.1
CLIC4-204ENST00000497755 KIF23Q02241 960 aaPredicted RBP28.18■■■□□ 2.1
CLIC4-204ENST00000497755 CCDC191Q8NCU4 936 aa28.18■■■□□ 2.1
CLIC4-204ENST00000497755 JARID2Q92833 1246 aaPredicted RBP28.18■■■□□ 2.1
CLIC4-204ENST00000497755 GGA1Q9UJY5 639 aa28.18■■■□□ 2.1
CLIC4-204ENST00000497755 G3V3G9 751 aa28.17■■■□□ 2.1
CLIC4-204ENST00000497755 DCAF8Q5TAQ9 597 aa28.17■■■□□ 2.1
CLIC4-204ENST00000497755 SULF1Q8IWU6 871 aa28.17■■■□□ 2.1
CLIC4-204ENST00000497755 IFT57Q9NWB7 429 aa28.17■■■□□ 2.1
CLIC4-204ENST00000497755 GGA3Q9NZ52 723 aa28.17■■■□□ 2.1
CLIC4-204ENST00000497755 PDE8AO60658 829 aa28.16■■■□□ 2.1
CLIC4-204ENST00000497755 ZNF280AP59817 542 aaPredicted RBP28.16■■■□□ 2.1
CLIC4-204ENST00000497755 CCDC152Q4G0S7 254 aa28.16■■■□□ 2.1
CLIC4-204ENST00000497755 RSBN1LQ6PCB5 846 aaPredicted RBP28.15■■■□□ 2.1
CLIC4-204ENST00000497755 CCDC85AQ96PX6 553 aaPredicted RBP28.15■■■□□ 2.1
CLIC4-204ENST00000497755 APAF1O14727 1248 aa28.14■■■□□ 2.1
CLIC4-204ENST00000497755 GNAI1P63096 354 aa28.14■■■□□ 2.1
CLIC4-204ENST00000497755 SCARF1Q14162 830 aa28.14■■■□□ 2.1
CLIC4-204ENST00000497755 C8orf58Q8NAV2 365 aa28.14■■■□□ 2.1
CLIC4-204ENST00000497755 AGBL3Q8NEM8 1001 aa28.14■■■□□ 2.1
CLIC4-204ENST00000497755 CDCA5Q96FF9 252 aa28.14■■■□□ 2.1
CLIC4-204ENST00000497755 CWC25Q9NXE8 425 aaPredicted RBP28.14■■■□□ 2.1
CLIC4-204ENST00000497755 RNF186Q9NXI6 227 aa28.14■■■□□ 2.1
CLIC4-204ENST00000497755 SAGE1Q9NXZ1 904 aa28.14■■■□□ 2.1
CLIC4-204ENST00000497755 GMLQ99445 158 aa28.13■■■□□ 2.09
CLIC4-204ENST00000497755 METTL22Q9BUU2 404 aaPredicted RBP28.13■■■□□ 2.09
CLIC4-204ENST00000497755 SLC10A3P09131 477 aa28.12■■■□□ 2.09
CLIC4-204ENST00000497755 ANGEL2Q5VTE6 544 aaKnown RBP28.12■■■□□ 2.09
CLIC4-204ENST00000497755 CSRNP1Q96S65 589 aa28.12■■■□□ 2.09
CLIC4-204ENST00000497755 ZNF609O15014 1411 aa28.11■■■□□ 2.09
CLIC4-204ENST00000497755 TRPA1O75762 1119 aa28.11■■■□□ 2.09
CLIC4-204ENST00000497755 SLC34A2O95436 690 aa28.11■■■□□ 2.09
CLIC4-204ENST00000497755 ANKRD18AQ8IVF6 992 aa28.11■■■□□ 2.09
CLIC4-204ENST00000497755 WTIPA6NIX2 430 aaPredicted RBP28.1■■■□□ 2.09
CLIC4-204ENST00000497755 CALD1Q05682 793 aaKnown RBP28.1■■■□□ 2.09
CLIC4-204ENST00000497755 XDHP47989 1333 aa28.1■■■□□ 2.09
CLIC4-204ENST00000497755 AKAP11Q9UKA4 1901 aa28.1■■■□□ 2.09
CLIC4-204ENST00000497755 USP17L8P0C7I0 530 aa28.09■■■□□ 2.09
CLIC4-204ENST00000497755 ATP2B4P23634 1241 aa28.09■■■□□ 2.09
CLIC4-204ENST00000497755 PSME4Q14997 1843 aa28.08■■■□□ 2.09
CLIC4-204ENST00000497755 PODNQ7Z5L7 613 aa28.08■■■□□ 2.09
CLIC4-204ENST00000497755 PRKRIP1Q9H875 184 aaPredicted RBP28.08■■■□□ 2.09
CLIC4-204ENST00000497755 MYOZ2Q9NPC6 264 aa28.08■■■□□ 2.09
CLIC4-204ENST00000497755 USP17L3A6NCW0 530 aa28.07■■■□□ 2.08
CLIC4-204ENST00000497755 USP17L4A6NCW7 530 aa28.07■■■□□ 2.08
CLIC4-204ENST00000497755 DDX58O95786 925 aaKnown RBP28.07■■■□□ 2.08
CLIC4-204ENST00000497755 CCDC30Q5VVM6 783 aa28.07■■■□□ 2.08
CLIC4-204ENST00000497755 USP17L1Q7RTZ2 530 aa28.07■■■□□ 2.08
CLIC4-204ENST00000497755 MAP3K2Q9Y2U5 619 aa28.07■■■□□ 2.08
CLIC4-204ENST00000497755 TNRC18O15417 2968 aaPredicted RBP28.05■■■□□ 2.08
CLIC4-204ENST00000497755 IGKV5-2P06315 115 aa28.05■■■□□ 2.08
CLIC4-204ENST00000497755 FKBP1BP68106 108 aa28.05■■■□□ 2.08
CLIC4-204ENST00000497755 RASAL3Q86YV0 1011 aa28.05■■■□□ 2.08
CLIC4-204ENST00000497755 TSPYL6Q8N831 410 aa28.05■■■□□ 2.08
CLIC4-204ENST00000497755 TTLL11Q8NHH1 800 aa28.05■■■□□ 2.08
CLIC4-204ENST00000497755 PITPNM2Q9BZ72 1349 aa28.04■■■□□ 2.08
CLIC4-204ENST00000497755 CTSWP56202 376 aa28.04■■■□□ 2.08
CLIC4-204ENST00000497755 KSR2Q6VAB6 950 aa28.04■■■□□ 2.08
CLIC4-204ENST00000497755 CDC5LQ99459 802 aaKnown RBP28.04■■■□□ 2.08
CLIC4-204ENST00000497755 CHMP4AQ9BY43 222 aa28.04■■■□□ 2.08
CLIC4-204ENST00000497755 MINPP1Q9UNW1 487 aa28.04■■■□□ 2.08
CLIC4-204ENST00000497755 SCAF8Q9UPN6 1271 aaKnown RBP28.04■■■□□ 2.08
CLIC4-204ENST00000497755 PI4KAP2A4QPH2 592 aa28.03■■■□□ 2.08
CLIC4-204ENST00000497755 REM2Q8IYK8 340 aaPredicted RBP28.03■■■□□ 2.08
CLIC4-204ENST00000497755 PI4KAP1Q8N8J0 262 aa28.03■■■□□ 2.08
CLIC4-204ENST00000497755 BSDC1Q9NW68 430 aaPredicted RBP28.03■■■□□ 2.08
CLIC4-204ENST00000497755 PDE4DIPQ5VU43 2346 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms