RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 IGF2-ASQ6U949 168 aa7.4□□□□□ -1.22
CBX3-208ENST00000497498 OR13H1Q8NG92 308 aa7.4□□□□□ -1.22
CBX3-208ENST00000497498 DLL1O00548 723 aa7.39□□□□□ -1.23
CBX3-208ENST00000497498 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
CBX3-208ENST00000497498 ZMYM1Q5SVZ6 1142 aa7.39□□□□□ -1.23
CBX3-208ENST00000497498 WFDC12Q8WWY7 111 aa7.39□□□□□ -1.23
CBX3-208ENST00000497498 RBSNQ9H1K0 784 aa7.39□□□□□ -1.23
CBX3-208ENST00000497498 FNDC3AQ9Y2H6 1198 aaKnown RBP7.39□□□□□ -1.23
CBX3-208ENST00000497498 FOXD4L6Q3SYB3 417 aaPredicted RBP7.38□□□□□ -1.23
CBX3-208ENST00000497498 PRSS36Q5K4E3 855 aa7.38□□□□□ -1.23
CBX3-208ENST00000497498 FOXD4L3Q6VB84 417 aaPredicted RBP7.38□□□□□ -1.23
CBX3-208ENST00000497498 CACTIN-AS1Q8N1I8 211 aa7.38□□□□□ -1.23
CBX3-208ENST00000497498 IL22RA1Q8N6P7 574 aa7.38□□□□□ -1.23
CBX3-208ENST00000497498 ABTB2Q8N961 1025 aa7.38□□□□□ -1.23
CBX3-208ENST00000497498 SEPT3Q9UH03 358 aa7.38□□□□□ -1.23
CBX3-208ENST00000497498 ARID3CA6NKF2 412 aa7.37□□□□□ -1.23
CBX3-208ENST00000497498 NOS3P29474 1203 aa7.37□□□□□ -1.23
CBX3-208ENST00000497498 GDF6Q6KF10 455 aaPredicted RBP7.37□□□□□ -1.23
CBX3-208ENST00000497498 GPR152Q8TDT2 470 aa7.37□□□□□ -1.23
CBX3-208ENST00000497498 TP53INP1Q96A56 240 aa7.37□□□□□ -1.23
CBX3-208ENST00000497498 SRA1Q9HD15 236 aaKnown RBP7.37□□□□□ -1.23
CBX3-208ENST00000497498 GTF3C3Q9Y5Q9 886 aa7.37□□□□□ -1.23
CBX3-208ENST00000497498 IREB2P48200 963 aaKnown RBP7.36□□□□□ -1.23
CBX3-208ENST00000497498 COL13A1Q5TAT6 717 aaPredicted RBP7.36□□□□□ -1.23
CBX3-208ENST00000497498 MAP4K3Q8IVH8 894 aa7.36□□□□□ -1.23
CBX3-208ENST00000497498 KIF4AO95239 1232 aa7.35□□□□□ -1.23
CBX3-208ENST00000497498 HYAL2Q12891 473 aa7.35□□□□□ -1.23
CBX3-208ENST00000497498 SETDB1Q15047 1291 aa7.35□□□□□ -1.23
CBX3-208ENST00000497498 TTC39BQ5VTQ0 682 aaPredicted RBP7.35□□□□□ -1.23
CBX3-208ENST00000497498 TMEM130Q8N3G9 435 aa7.35□□□□□ -1.23
CBX3-208ENST00000497498 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
CBX3-208ENST00000497498 ABI2Q9NYB9 513 aaPredicted RBP7.35□□□□□ -1.23
CBX3-208ENST00000497498 TRIM33Q9UPN9 1127 aa7.35□□□□□ -1.23
CBX3-208ENST00000497498 PDE12Q6L8Q7 609 aaKnown RBP7.34□□□□□ -1.23
CBX3-208ENST00000497498 HELQQ8TDG4 1101 aa7.33□□□□□ -1.24
CBX3-208ENST00000497498 DCAF11Q8TEB1 546 aa7.33□□□□□ -1.24
CBX3-208ENST00000497498 MEGF10Q96KG7 1140 aa7.33□□□□□ -1.24
CBX3-208ENST00000497498 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
CBX3-208ENST00000497498 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
CBX3-208ENST00000497498 PPME1Q9Y570 386 aa7.33□□□□□ -1.24
CBX3-208ENST00000497498 TMEM88BA6NKF7 163 aa7.32□□□□□ -1.24
CBX3-208ENST00000497498 SCNN1AP37088 669 aa7.32□□□□□ -1.24
CBX3-208ENST00000497498 ATP11AP98196 1134 aa7.32□□□□□ -1.24
CBX3-208ENST00000497498 ATCAYQ86WG3 371 aa7.32□□□□□ -1.24
CBX3-208ENST00000497498 DZIP1LQ8IYY4 767 aaKnown RBP7.32□□□□□ -1.24
CBX3-208ENST00000497498 CCDC82Q8N4S0 544 aa7.32□□□□□ -1.24
CBX3-208ENST00000497498 NUDT16Q96DE0 195 aaKnown RBP7.32□□□□□ -1.24
CBX3-208ENST00000497498 AKTIPQ9H8T0 292 aa7.32□□□□□ -1.24
CBX3-208ENST00000497498 ELP3Q9H9T3 547 aa7.32□□□□□ -1.24
CBX3-208ENST00000497498 F8W735 103 aaPredicted RBP7.31□□□□□ -1.24
CBX3-208ENST00000497498 PPP1R15AO75807 674 aaPredicted RBP7.31□□□□□ -1.24
CBX3-208ENST00000497498 SMNDC1O75940 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
CBX3-208ENST00000497498 CYP2E1P05181 493 aaPredicted RBP7.31□□□□□ -1.24
CBX3-208ENST00000497498 RPLP1P05386 114 aaKnown RBP7.31□□□□□ -1.24
CBX3-208ENST00000497498 SSFA2P28290 1259 aa7.31□□□□□ -1.24
CBX3-208ENST00000497498 XKR5Q6UX68 686 aa7.31□□□□□ -1.24
CBX3-208ENST00000497498 Q6ZS46 218 aa7.31□□□□□ -1.24
CBX3-208ENST00000497498 CEP120Q8N960 986 aa7.31□□□□□ -1.24
CBX3-208ENST00000497498 TMEM63CQ9P1W3 806 aa7.31□□□□□ -1.24
CBX3-208ENST00000497498 TM4SF5O14894 197 aa7.3□□□□□ -1.24
CBX3-208ENST00000497498 ARTNQ5T4W7 220 aa7.3□□□□□ -1.24
CBX3-208ENST00000497498 CEP135Q66GS9 1140 aa7.3□□□□□ -1.24
CBX3-208ENST00000497498 ADAMTSL4Q6UY14 1074 aa7.3□□□□□ -1.24
CBX3-208ENST00000497498 PBX4Q9BYU1 374 aa7.3□□□□□ -1.24
CBX3-208ENST00000497498 RASSF4Q9H2L5 321 aa7.3□□□□□ -1.24
CBX3-208ENST00000497498 SCO2A0A1W2PP80 73 aa7.29□□□□□ -1.24
CBX3-208ENST00000497498 ALX3O95076 343 aa7.29□□□□□ -1.24
CBX3-208ENST00000497498 NOM1Q5C9Z4 860 aaKnown RBP7.29□□□□□ -1.24
CBX3-208ENST00000497498 ZNF438Q7Z4V0 828 aa7.29□□□□□ -1.24
CBX3-208ENST00000497498 GALNT11Q8NCW6 608 aa7.29□□□□□ -1.24
CBX3-208ENST00000497498 EDEM1Q92611 657 aa7.29□□□□□ -1.24
CBX3-208ENST00000497498 C1orf115Q9H7X2 142 aa7.29□□□□□ -1.24
CBX3-208ENST00000497498 CNTN3Q9P232 1028 aa7.29□□□□□ -1.24
CBX3-208ENST00000497498 LINC01387J3KSC0 135 aa7.28□□□□□ -1.24
CBX3-208ENST00000497498 PDGFAP04085 211 aa7.28□□□□□ -1.24
CBX3-208ENST00000497498 MZF1P28698 734 aaPredicted RBP7.28□□□□□ -1.24
CBX3-208ENST00000497498 CDC27P30260 824 aa7.28□□□□□ -1.24
CBX3-208ENST00000497498 PRR23CQ6ZRP0 262 aa7.28□□□□□ -1.24
CBX3-208ENST00000497498 NCAPG2Q86XI2 1143 aa7.28□□□□□ -1.24
CBX3-208ENST00000497498 GTF3C2Q8WUA4 911 aaPredicted RBP7.28□□□□□ -1.24
CBX3-208ENST00000497498 LACRTQ9GZZ8 138 aa7.28□□□□□ -1.24
CBX3-208ENST00000497498 GGNBP2Q9H3C7 697 aa7.28□□□□□ -1.24
CBX3-208ENST00000497498 SALL4Q9UJQ4 1053 aa7.28□□□□□ -1.24
CBX3-208ENST00000497498 NPR3P17342 541 aa7.27□□□□□ -1.25
CBX3-208ENST00000497498 EIF1AXP47813 144 aaKnown RBP7.27□□□□□ -1.25
CBX3-208ENST00000497498 DNM1Q05193 864 aaKnown RBP7.27□□□□□ -1.25
CBX3-208ENST00000497498 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.27□□□□□ -1.25
CBX3-208ENST00000497498 POP1Q99575 1024 aaKnown RBP7.27□□□□□ -1.25
CBX3-208ENST00000497498 ADAM19Q9H013 955 aa7.27□□□□□ -1.25
CBX3-208ENST00000497498 ZFP64Q9NPA5 681 aa7.27□□□□□ -1.25
CBX3-208ENST00000497498 PCSK2P16519 638 aa7.26□□□□□ -1.25
CBX3-208ENST00000497498 PTPRAP18433 802 aa7.26□□□□□ -1.25
CBX3-208ENST00000497498 MPSTP25325 297 aa7.26□□□□□ -1.25
CBX3-208ENST00000497498 CD68P34810 354 aaPredicted RBP7.26□□□□□ -1.25
CBX3-208ENST00000497498 SLC51AQ86UW1 340 aa7.26□□□□□ -1.25
CBX3-208ENST00000497498 C1orf127Q8N9H9 656 aa7.26□□□□□ -1.25
CBX3-208ENST00000497498 KANSL3Q9P2N6 904 aa7.26□□□□□ -1.25
CBX3-208ENST00000497498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.26□□□□□ -1.25
CBX3-208ENST00000497498 NFKBIEO00221 500 aa7.25□□□□□ -1.25
CBX3-208ENST00000497498 FSCN2O14926 492 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms