RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 EPHX2P34913 555 aa13.86□□□□□ -0.19
SHROOM3-210ENST00000497440 EPHA10Q5JZY3 1008 aa13.86□□□□□ -0.19
SHROOM3-210ENST00000497440 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
SHROOM3-210ENST00000497440 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
SHROOM3-210ENST00000497440 ANKRD18AQ8IVF6 992 aa13.86□□□□□ -0.19
SHROOM3-210ENST00000497440 DPF2Q92785 391 aa13.86□□□□□ -0.19
SHROOM3-210ENST00000497440 ZNF609O15014 1411 aa13.86□□□□□ -0.19
SHROOM3-210ENST00000497440 XDHP47989 1333 aa13.86□□□□□ -0.19
SHROOM3-210ENST00000497440 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
SHROOM3-210ENST00000497440 SRCIN1Q9C0H9 1055 aa13.85□□□□□ -0.19
SHROOM3-210ENST00000497440 GPRC5DQ9NZD1 345 aa13.85□□□□□ -0.19
SHROOM3-210ENST00000497440 IRS2Q9Y4H2 1338 aa13.85□□□□□ -0.19
SHROOM3-210ENST00000497440 SCN9AQ15858 1988 aa13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 ITGA6P23229 1130 aa13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 EPS15P42566 896 aa13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 USP50Q70EL3 339 aaPredicted RBP13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 CCDC85AQ96PX6 553 aaPredicted RBP13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 EYA3Q99504 573 aa13.84□□□□□ -0.19
SHROOM3-210ENST00000497440 VIL1P09327 827 aaKnown RBP13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 NBPF7P0C2Y1 421 aaPredicted RBP13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 RARSP54136 660 aaKnown RBP13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 TNIP1Q15025 636 aa13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 FAM161AQ3B820 660 aa13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 C15orf52Q6ZUT6 534 aaKnown RBP13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 USP44Q9H0E7 712 aa13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 KCNQ5Q9NR82 932 aa13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 GGA1Q9UJY5 639 aa13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 LEMD3Q9Y2U8 911 aa13.83□□□□□ -0.2
SHROOM3-210ENST00000497440 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 CCT4P50991 539 aaKnown RBP13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 JMYQ8N9B5 988 aa13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 ARHGAP45Q92619 1136 aa13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 GMLQ99445 158 aa13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 ZC3H12CQ9C0D7 883 aaKnown RBP13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 ADARB2Q9NS39 739 aaKnown RBP13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 MED23Q9ULK4 1368 aa13.82□□□□□ -0.2
SHROOM3-210ENST00000497440 ECE2O60344 883 aa13.81□□□□□ -0.2
SHROOM3-210ENST00000497440 RAD17O75943 681 aa13.81□□□□□ -0.2
SHROOM3-210ENST00000497440 GMPSP49915 693 aaPredicted RBP13.81□□□□□ -0.2
SHROOM3-210ENST00000497440 HIRAP54198 1017 aaPredicted RBP13.81□□□□□ -0.2
SHROOM3-210ENST00000497440 LMBR1LQ6UX01 489 aa13.81□□□□□ -0.2
SHROOM3-210ENST00000497440 ZC3H15Q8WU90 426 aaKnown RBP13.81□□□□□ -0.2
SHROOM3-210ENST00000497440 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
SHROOM3-210ENST00000497440 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
SHROOM3-210ENST00000497440 PSME4Q14997 1843 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 PSMD14O00487 310 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 RIMBP2O15034 1052 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 UFL1O94874 794 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 RPS12P25398 132 aaKnown RBP13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 IGHMBP2P38935 993 aaKnown RBP13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 CNTROBQ8N137 903 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 KLRG1Q96E93 195 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 SUCLG2Q96I99 432 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 ANKRD2Q9GZV1 360 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 DBNDD1Q9H9R9 158 aa13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
SHROOM3-210ENST00000497440 IFIT5Q13325 482 aaKnown RBP13.79□□□□□ -0.2
SHROOM3-210ENST00000497440 DOK7Q18PE1 504 aa13.79□□□□□ -0.2
SHROOM3-210ENST00000497440 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
SHROOM3-210ENST00000497440 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
SHROOM3-210ENST00000497440 ANKRD44Q8N8A2 993 aa13.79□□□□□ -0.2
SHROOM3-210ENST00000497440 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
SHROOM3-210ENST00000497440 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
SHROOM3-210ENST00000497440 RIPOR2Q9Y4F9 1068 aa13.79□□□□□ -0.2
SHROOM3-210ENST00000497440 ZNF646O15015 1829 aaPredicted RBP13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 ZNF280AP59817 542 aaPredicted RBP13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 HTRA3P83110 453 aa13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 CHRNDQ07001 517 aa13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 BCL2L13Q9BXK5 485 aa13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 NOB1Q9ULX3 412 aaKnown RBP13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
SHROOM3-210ENST00000497440 MAP1SQ66K74 1059 aaPredicted RBP13.77□□□□□ -0.21
SHROOM3-210ENST00000497440 INTS3Q68E01 1043 aaKnown RBP13.77□□□□□ -0.21
SHROOM3-210ENST00000497440 AGBL3Q8NEM8 1001 aa13.77□□□□□ -0.21
SHROOM3-210ENST00000497440 MPHOSPH8Q99549 860 aa13.77□□□□□ -0.21
SHROOM3-210ENST00000497440 COA1Q9GZY4 146 aa13.77□□□□□ -0.21
SHROOM3-210ENST00000497440 A0A1B0GUL6 1792 aa13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 SHTN1A0MZ66 631 aa13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 RFX5P48382 616 aaPredicted RBP13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 MMP14P50281 582 aa13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 CCDC57Q2TAC2 916 aa13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 EAPPQ56P03 285 aaPredicted RBP13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 STRIP1Q5VSL9 837 aa13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 RSBN1LQ6PCB5 846 aaPredicted RBP13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 TRPM4Q8TD43 1214 aa13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 API5Q9BZZ5 524 aaKnown RBP13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
SHROOM3-210ENST00000497440 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 USP17L3A6NCW0 530 aa13.75□□□□□ -0.21
SHROOM3-210ENST00000497440 USP17L4A6NCW7 530 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms