RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 BSDC1Q9NW68 430 aaPredicted RBP13.88□□□□□ -0.19
ECM1-206ENST00000496744 GPRC5DQ9NZD1 345 aa13.88□□□□□ -0.19
ECM1-206ENST00000496744 MINPP1Q9UNW1 487 aa13.88□□□□□ -0.19
ECM1-206ENST00000496744 PASKQ96RG2 1323 aa13.88□□□□□ -0.19
ECM1-206ENST00000496744 GMPSP49915 693 aaPredicted RBP13.87□□□□□ -0.19
ECM1-206ENST00000496744 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
ECM1-206ENST00000496744 EPHA10Q5JZY3 1008 aa13.87□□□□□ -0.19
ECM1-206ENST00000496744 DIEXFQ68CQ4 756 aaKnown RBP13.87□□□□□ -0.19
ECM1-206ENST00000496744 DBNDD1Q9H9R9 158 aa13.87□□□□□ -0.19
ECM1-206ENST00000496744 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
ECM1-206ENST00000496744 MYH3P11055 1940 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 GRM8O00222 908 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 ALDH1L1O75891 902 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 UFL1O94874 794 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 ITGA6P23229 1130 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 TNIP1Q15025 636 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 DOK7Q18PE1 504 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 EYA3Q99504 573 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 GGA1Q9UJY5 639 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 XDHP47989 1333 aa13.86□□□□□ -0.19
ECM1-206ENST00000496744 SHTN1A0MZ66 631 aa13.85□□□□□ -0.19
ECM1-206ENST00000496744 PSMD14O00487 310 aa13.85□□□□□ -0.19
ECM1-206ENST00000496744 ECE2O60344 883 aa13.85□□□□□ -0.19
ECM1-206ENST00000496744 LMOD1P29536 600 aaPredicted RBP13.85□□□□□ -0.19
ECM1-206ENST00000496744 MAP1SQ66K74 1059 aaPredicted RBP13.85□□□□□ -0.19
ECM1-206ENST00000496744 SLC4A10Q6U841 1118 aa13.85□□□□□ -0.19
ECM1-206ENST00000496744 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
ECM1-206ENST00000496744 KAZALD1Q96I82 304 aa13.85□□□□□ -0.19
ECM1-206ENST00000496744 ZC3H12CQ9C0D7 883 aaKnown RBP13.85□□□□□ -0.19
ECM1-206ENST00000496744 SRCIN1Q9C0H9 1055 aa13.85□□□□□ -0.19
ECM1-206ENST00000496744 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
ECM1-206ENST00000496744 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
ECM1-206ENST00000496744 HIRAP54198 1017 aaPredicted RBP13.84□□□□□ -0.19
ECM1-206ENST00000496744 ALDH1L2Q3SY69 923 aa13.84□□□□□ -0.19
ECM1-206ENST00000496744 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
ECM1-206ENST00000496744 KLRG1Q96E93 195 aa13.84□□□□□ -0.19
ECM1-206ENST00000496744 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
ECM1-206ENST00000496744 ADARB2Q9NS39 739 aaKnown RBP13.84□□□□□ -0.19
ECM1-206ENST00000496744 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
ECM1-206ENST00000496744 UTYO14607 1347 aa13.84□□□□□ -0.19
ECM1-206ENST00000496744 VIL1P09327 827 aaKnown RBP13.83□□□□□ -0.2
ECM1-206ENST00000496744 NBPF7P0C2Y1 421 aaPredicted RBP13.83□□□□□ -0.2
ECM1-206ENST00000496744 LMBR1LQ6UX01 489 aa13.83□□□□□ -0.2
ECM1-206ENST00000496744 DPF2Q92785 391 aa13.83□□□□□ -0.2
ECM1-206ENST00000496744 PGAP2Q9UHJ9 254 aa13.83□□□□□ -0.2
ECM1-206ENST00000496744 CNOT7Q9UIV1 285 aaKnown RBP13.83□□□□□ -0.2
ECM1-206ENST00000496744 PTPRCP08575 1304 aa13.83□□□□□ -0.2
ECM1-206ENST00000496744 SCN9AQ15858 1988 aa13.82□□□□□ -0.2
ECM1-206ENST00000496744 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
ECM1-206ENST00000496744 CCT4P50991 539 aaKnown RBP13.82□□□□□ -0.2
ECM1-206ENST00000496744 TXNRD3Q86VQ6 643 aa13.82□□□□□ -0.2
ECM1-206ENST00000496744 JMYQ8N9B5 988 aa13.82□□□□□ -0.2
ECM1-206ENST00000496744 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
ECM1-206ENST00000496744 C9orf78Q9NZ63 289 aaPredicted RBP13.82□□□□□ -0.2
ECM1-206ENST00000496744 PCNTO95613 3336 aa13.82□□□□□ -0.2
ECM1-206ENST00000496744 ANKRD18BA2A2Z9 1011 aa13.81□□□□□ -0.2
ECM1-206ENST00000496744 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
ECM1-206ENST00000496744 BRPF1P55201 1214 aaPredicted RBP13.81□□□□□ -0.2
ECM1-206ENST00000496744 FMR1Q06787 632 aaKnown RBP eCLIP13.81□□□□□ -0.2
ECM1-206ENST00000496744 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
ECM1-206ENST00000496744 TRPM4Q8TD43 1214 aa13.81□□□□□ -0.2
ECM1-206ENST00000496744 SUCLG2Q96I99 432 aa13.81□□□□□ -0.2
ECM1-206ENST00000496744 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
ECM1-206ENST00000496744 EGFRP00533 1210 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 RPS12P25398 132 aaKnown RBP13.8□□□□□ -0.2
ECM1-206ENST00000496744 KLRK1P26718 216 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 CHRNDQ07001 517 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 MICALL2Q8IY33 904 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 MPHOSPH8Q99549 860 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 ANKRD2Q9GZV1 360 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 USP44Q9H0E7 712 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 IRS2Q9Y4H2 1338 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 SPEF2Q9C093 1822 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 MED23Q9ULK4 1368 aa13.8□□□□□ -0.2
ECM1-206ENST00000496744 SNAP23O00161 211 aa13.79□□□□□ -0.2
ECM1-206ENST00000496744 RABL6Q3YEC7 729 aaPredicted RBP13.79□□□□□ -0.2
ECM1-206ENST00000496744 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
ECM1-206ENST00000496744 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
ECM1-206ENST00000496744 ZC3H15Q8WU90 426 aaKnown RBP13.79□□□□□ -0.2
ECM1-206ENST00000496744 ZNF594Q96JF6 807 aaPredicted RBP13.79□□□□□ -0.2
ECM1-206ENST00000496744 GMLQ99445 158 aa13.79□□□□□ -0.2
ECM1-206ENST00000496744 CHMP3Q9Y3E7 222 aa13.79□□□□□ -0.2
ECM1-206ENST00000496744 ZNF804BA4D1E1 1349 aa13.79□□□□□ -0.2
ECM1-206ENST00000496744 TMEM88BA6NKF7 163 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 G3V3G9 751 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 H7C1D1 291 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 TRAF5O00463 557 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 TAF5LO75529 589 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 RARSP54136 660 aaKnown RBP13.78□□□□□ -0.2
ECM1-206ENST00000496744 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 DCAF8Q5TAQ9 597 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 CST9Q5W186 159 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 ANKRD44Q8N8A2 993 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
ECM1-206ENST00000496744 BICC1Q9H694 974 aaKnown RBP13.78□□□□□ -0.2
ECM1-206ENST00000496744 NOB1Q9ULX3 412 aaKnown RBP13.78□□□□□ -0.2
ECM1-206ENST00000496744 ZNF609O15014 1411 aa13.78□□□□□ -0.2
ECM1-206ENST00000496744 ZNF280AP59817 542 aaPredicted RBP13.77□□□□□ -0.21
ECM1-206ENST00000496744 RSBN1LQ6PCB5 846 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms