RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 SCN4AP35499 1836 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 F6X3S4 739 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 KIF3CO14782 793 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 TPRNQ4KMQ1 711 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 TAF7LQ5H9L4 462 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 CELF1Q92879 486 aaKnown RBP9.56□□□□□ -0.88
CDHR3-214ENST00000496633 RRAGCQ9HB90 399 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 LEMD3Q9Y2U8 911 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 UTYO14607 1347 aa9.56□□□□□ -0.88
CDHR3-214ENST00000496633 MS4A1P11836 297 aa9.55□□□□□ -0.88
CDHR3-214ENST00000496633 ITGA6P23229 1130 aa9.55□□□□□ -0.88
CDHR3-214ENST00000496633 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
CDHR3-214ENST00000496633 CASP7P55210 303 aa9.55□□□□□ -0.88
CDHR3-214ENST00000496633 HACL1Q9UJ83 578 aa9.55□□□□□ -0.88
CDHR3-214ENST00000496633 RPS12P25398 132 aaKnown RBP9.54□□□□□ -0.88
CDHR3-214ENST00000496633 PRELPP51888 382 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 AOC3Q16853 763 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 CIAPIN1Q6FI81 312 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 PODNQ7Z5L7 613 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 TBC1D16Q8TBP0 767 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 GREM2Q9H772 168 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 NMRK2Q9NPI5 230 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 SEC31BQ9NQW1 1179 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 CHMP3Q9Y3E7 222 aa9.54□□□□□ -0.88
CDHR3-214ENST00000496633 DDNO94850 711 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-214ENST00000496633 UFL1O94874 794 aa9.53□□□□□ -0.88
CDHR3-214ENST00000496633 GNAI3P08754 354 aa9.53□□□□□ -0.88
CDHR3-214ENST00000496633 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-214ENST00000496633 KCNJ4P48050 445 aa9.53□□□□□ -0.88
CDHR3-214ENST00000496633 APLP1P51693 650 aa9.53□□□□□ -0.88
CDHR3-214ENST00000496633 OLFM4Q6UX06 510 aa9.53□□□□□ -0.88
CDHR3-214ENST00000496633 LDHDQ86WU2 507 aa9.53□□□□□ -0.88
CDHR3-214ENST00000496633 DPF2Q92785 391 aa9.53□□□□□ -0.88
CDHR3-214ENST00000496633 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
CDHR3-214ENST00000496633 MED23Q9ULK4 1368 aa9.52□□□□□ -0.88
CDHR3-214ENST00000496633 H7C1D1 291 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 UBTFL1P0CB47 393 aaPredicted RBP9.52□□□□□ -0.89
CDHR3-214ENST00000496633 HSPA6P17066 643 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 GPSM2P81274 684 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 FAM161AQ3B820 660 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 RABL6Q3YEC7 729 aaPredicted RBP9.52□□□□□ -0.89
CDHR3-214ENST00000496633 LMBR1LQ6UX01 489 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 ATF7IPQ6VMQ6 1270 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 LDHAL6AQ6ZMR3 332 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 USP50Q70EL3 339 aaPredicted RBP9.52□□□□□ -0.89
CDHR3-214ENST00000496633 ERICH6Q7L0X2 663 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 BCL2L13Q9BXK5 485 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 CNNM1Q9NRU3 951 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 NOB1Q9ULX3 412 aaKnown RBP9.52□□□□□ -0.89
CDHR3-214ENST00000496633 MINPP1Q9UNW1 487 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 GJA3Q9Y6H8 435 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 MROH5Q6ZUA9 1318 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 MYO3BQ8WXR4 1341 aa9.52□□□□□ -0.89
CDHR3-214ENST00000496633 EPHX2P34913 555 aa9.51□□□□□ -0.89
CDHR3-214ENST00000496633 FOXO4P98177 505 aa9.51□□□□□ -0.89
CDHR3-214ENST00000496633 ZKSCAN2Q63HK3 967 aa9.51□□□□□ -0.89
CDHR3-214ENST00000496633 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
CDHR3-214ENST00000496633 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
CDHR3-214ENST00000496633 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
CDHR3-214ENST00000496633 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
CDHR3-214ENST00000496633 COA1Q9GZY4 146 aa9.51□□□□□ -0.89
CDHR3-214ENST00000496633 TAF1DQ9H5J8 278 aaPredicted RBP9.51□□□□□ -0.89
CDHR3-214ENST00000496633 ADARB2Q9NS39 739 aaKnown RBP9.51□□□□□ -0.89
CDHR3-214ENST00000496633 POLLQ9UGP5 575 aa9.51□□□□□ -0.89
CDHR3-214ENST00000496633 ZNF804BA4D1E1 1349 aa9.51□□□□□ -0.89
CDHR3-214ENST00000496633 ZNF609O15014 1411 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 ECE2O60344 883 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
CDHR3-214ENST00000496633 CXCL9Q07325 125 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 C15orf52Q6ZUT6 534 aaKnown RBP9.5□□□□□ -0.89
CDHR3-214ENST00000496633 ZNF804AQ7Z570 1209 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
CDHR3-214ENST00000496633 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.5□□□□□ -0.89
CDHR3-214ENST00000496633 AGBL3Q8NEM8 1001 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 USP44Q9H0E7 712 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 GPRC5DQ9NZD1 345 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 LTBP1Q14766 1721 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 ZNF541Q9H0D2 1346 aa9.5□□□□□ -0.89
CDHR3-214ENST00000496633 TAF1P21675 1872 aa9.49□□□□□ -0.89
CDHR3-214ENST00000496633 RIMBP2O15034 1052 aa9.49□□□□□ -0.89
CDHR3-214ENST00000496633 CHRNDQ07001 517 aa9.49□□□□□ -0.89
CDHR3-214ENST00000496633 UBE4AQ14139 1066 aa9.49□□□□□ -0.89
CDHR3-214ENST00000496633 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
CDHR3-214ENST00000496633 FRAT1Q92837 279 aaPredicted RBP9.49□□□□□ -0.89
CDHR3-214ENST00000496633 CLEC11AQ9Y240 323 aa9.49□□□□□ -0.89
CDHR3-214ENST00000496633 DUOX1Q9NRD9 1551 aa9.49□□□□□ -0.89
CDHR3-214ENST00000496633 USP17L3A6NCW0 530 aa9.48□□□□□ -0.89
CDHR3-214ENST00000496633 USP17L4A6NCW7 530 aa9.48□□□□□ -0.89
CDHR3-214ENST00000496633 POTECB2RU33 542 aa9.48□□□□□ -0.89
CDHR3-214ENST00000496633 EAPPQ56P03 285 aaPredicted RBP9.48□□□□□ -0.89
CDHR3-214ENST00000496633 CAVIN4Q5BKX8 364 aa9.48□□□□□ -0.89
CDHR3-214ENST00000496633 STRIP1Q5VSL9 837 aa9.48□□□□□ -0.89
CDHR3-214ENST00000496633 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
CDHR3-214ENST00000496633 SUCLG2Q96I99 432 aa9.48□□□□□ -0.89
CDHR3-214ENST00000496633 BICC1Q9H694 974 aaKnown RBP9.48□□□□□ -0.89
CDHR3-214ENST00000496633 DBNDD1Q9H9R9 158 aa9.48□□□□□ -0.89
CDHR3-214ENST00000496633 RAD17O75943 681 aa9.47□□□□□ -0.89
CDHR3-214ENST00000496633 CIAO1O76071 339 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms