RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	EVC2	Q86UK5	1308 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	AK9	Q5TCS8	1911 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	RPS6KA5	O75582	802 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	PSMA5	P28066	241 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	ME1	P48163	572 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	FILIP1L	Q4L180	1135 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	UHRF1BP1	Q6BDS2	1440 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	IFNK	Q9P0W0	207 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	UGGT2	Q9NYU1	1516 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	PLEKHD1	A6NEE1	506 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	PPFIBP1	Q86W92	1011 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	SMARCC2	Q8TAQ2	1214 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	BCORL1	Q5H9F3	1711 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	KIF3B	O15066	747 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	ZEB2	O60315	1214 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	RANBP1	P43487	201 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	GNGT1	P63211	74 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	STIM1	Q13586	685 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	RABEP2	Q9H5N1	569 aa		9.36	□□□□□ -0.91
CRNKL1-205	ENST00000496549	CTAGE9	A4FU28	777 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	SLMAP	Q14BN4	828 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	ANKRD1	Q15327	319 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	E2F5	Q15329	346 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	CCDC144B	Q3MJ40	725 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	CCDC144CP	Q8IYA2	1237 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	STK11IP	Q8N1F8	1099 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	TBC1D31	Q96DN5	1066 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	EPB41L2	O43491	1005 aa	Known RBP	9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	CCDC38	Q502W7	563 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	SARM1	Q6SZW1	724 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	KLHL23	Q8NBE8	558 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	ARHGAP6	O43182	974 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	PPFIA1	Q13136	1202 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	WHAMMP3	Q1A5X7	153 aa		9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	CAPRIN2	Q6IMN6	1127 aa	Known RBP	9.35	□□□□□ -0.91
CRNKL1-205	ENST00000496549	ABCC2	Q92887	1545 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	FAM135A	Q9P2D6	1515 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	CCDC175	P0C221	793 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	CASP8	Q14790	479 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	CCDC40	Q4G0X9	1142 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	LRRC31	Q6UY01	552 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	ESYT1	Q9BSJ8	1104 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	KLC4	Q9NSK0	619 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	RIPOR2	Q9Y4F9	1068 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	UHRF1BP1L	A0JNW5	1464 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	HSF2BP	O75031	334 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	LUC7L3	O95232	432 aa	Known RBP	9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	MTHFS	P49914	203 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	UBASH3A	P57075	661 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	OSBPL9	Q96SU4	736 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	TRIM4	Q9C037	500 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	KIF9	Q9HAQ2	790 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	ATG3	Q9NT62	314 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	HYPK	Q9NX55	129 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	DAPK1	P53355	1430 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	PSME1	Q06323	249 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	FAM114A1	Q8IWE2	563 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	WDR66	Q8TBY9	1149 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	ASXL1	Q8IXJ9	1541 aa		9.34	□□□□□ -0.91
CRNKL1-205	ENST00000496549	COL17A1	Q9UMD9	1497 aa	Predicted RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	KANK1	Q14678	1352 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ENO4	A6NNW6	628 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	C21orf2	O43822	256 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SMIM24	O75264	130 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ARID5B	Q14865	1188 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SRGAP1	Q7Z6B7	1085 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ZBTB10	Q96DT7	871 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	GPATCH3	Q96I76	525 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	FUT8	Q9BYC5	575 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	BAIAP2L1	Q9UHR4	511 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	GOLGA6B	A6NDN3	693 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	GSPT1	P15170	499 aa	Known RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	GPT	P24298	496 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ACTN3	Q08043	901 aa	Predicted RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	RRP12	Q5JTH9	1297 aa	Known RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SPECC1	Q5M775	1068 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SLC30A9	Q6PML9	568 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	FCHSD1	Q86WN1	690 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	TCP11	Q8WWU5	503 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	BAG1	Q99933	345 aa	Predicted RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	A1CF	Q9NQ94	594 aa	Known RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SCAF11	Q99590	1463 aa	Known RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ANKRD50	Q9ULJ7	1429 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ATP2C2	O75185	946 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CDKL5	O76039	1030 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ICA1	Q05084	483 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CPLX2	Q6PUV4	134 aa	Known RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CCDC47	Q96A33	483 aa	Known RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	JAKMIP1	Q96N16	626 aa	Known RBP	9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	TSC22D3	Q99576	134 aa		9.33	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SLC4A10	Q6U841	1118 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CCAR1	Q8IX12	1150 aa	Known RBP	9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ACTR5	Q9H9F9	607 aa	Predicted RBP	9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ARHGEF12	Q9NZN5	1544 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CHGA	P10645	457 aa	Known RBP	9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	GNAI1	P63096	354 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ODF2	Q5BJF6	829 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	REXO1L1P	Q8IX06	675 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	LMNTD2	Q8IXW0	634 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CNTROB	Q8N137	903 aa		9.32	□□□□□ -0.92

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