RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 SCNN1DP51172 638 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 HTRA3P83110 453 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 FOXO4P98177 505 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 DOK7Q18PE1 504 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 DBNDD1Q9H9R9 158 aa18.36■□□□□ 0.53
PDAP1-204ENST00000496335 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
PDAP1-204ENST00000496335 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
PDAP1-204ENST00000496335 ALDH1L2Q3SY69 923 aa18.35■□□□□ 0.53
PDAP1-204ENST00000496335 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
PDAP1-204ENST00000496335 CIAPIN1Q6FI81 312 aa18.35■□□□□ 0.53
PDAP1-204ENST00000496335 EYA3Q99504 573 aa18.35■□□□□ 0.53
PDAP1-204ENST00000496335 SMC4Q9NTJ3 1288 aa18.35■□□□□ 0.53
PDAP1-204ENST00000496335 C9orf78Q9NZ63 289 aaPredicted RBP18.35■□□□□ 0.53
PDAP1-204ENST00000496335 GGA1Q9UJY5 639 aa18.35■□□□□ 0.53
PDAP1-204ENST00000496335 PTPRCP08575 1304 aa18.34■□□□□ 0.53
PDAP1-204ENST00000496335 XDHP47989 1333 aa18.34■□□□□ 0.53
PDAP1-204ENST00000496335 LMOD1P29536 600 aaPredicted RBP18.34■□□□□ 0.53
PDAP1-204ENST00000496335 LDHDQ86WU2 507 aa18.34■□□□□ 0.53
PDAP1-204ENST00000496335 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
PDAP1-204ENST00000496335 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
PDAP1-204ENST00000496335 MINPP1Q9UNW1 487 aa18.34■□□□□ 0.53
PDAP1-204ENST00000496335 ECE2O60344 883 aa18.33■□□□□ 0.52
PDAP1-204ENST00000496335 IGHMBP2P38935 993 aaKnown RBP18.33■□□□□ 0.52
PDAP1-204ENST00000496335 GMPSP49915 693 aaPredicted RBP18.33■□□□□ 0.52
PDAP1-204ENST00000496335 HNRNPUQ00839 825 aaKnown RBP eCLIP18.33■□□□□ 0.52
PDAP1-204ENST00000496335 TNIP1Q15025 636 aa18.33■□□□□ 0.52
PDAP1-204ENST00000496335 LMBR1LQ6UX01 489 aa18.33■□□□□ 0.52
PDAP1-204ENST00000496335 CLEC11AQ9Y240 323 aa18.33■□□□□ 0.52
PDAP1-204ENST00000496335 CHMP3Q9Y3E7 222 aa18.33■□□□□ 0.52
PDAP1-204ENST00000496335 SCN9AQ15858 1988 aa18.33■□□□□ 0.52
PDAP1-204ENST00000496335 ADAMTSL1Q8N6G6 1762 aa18.32■□□□□ 0.52
PDAP1-204ENST00000496335 NBPF7P0C2Y1 421 aaPredicted RBP18.32■□□□□ 0.52
PDAP1-204ENST00000496335 ATP2B4P23634 1241 aa18.32■□□□□ 0.52
PDAP1-204ENST00000496335 PNMA8AQ86V59 439 aaPredicted RBP18.32■□□□□ 0.52
PDAP1-204ENST00000496335 GPRC5DQ9NZD1 345 aa18.32■□□□□ 0.52
PDAP1-204ENST00000496335 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
PDAP1-204ENST00000496335 CT47B1P0C2W7 299 aaPredicted RBP18.31■□□□□ 0.52
PDAP1-204ENST00000496335 SUCLG2Q96I99 432 aa18.31■□□□□ 0.52
PDAP1-204ENST00000496335 MPHOSPH8Q99549 860 aa18.31■□□□□ 0.52
PDAP1-204ENST00000496335 G3V3G9 751 aa18.3■□□□□ 0.52
PDAP1-204ENST00000496335 PSMD14O00487 310 aa18.3■□□□□ 0.52
PDAP1-204ENST00000496335 IFIT5Q13325 482 aaKnown RBP18.3■□□□□ 0.52
PDAP1-204ENST00000496335 DCAF8Q5TAQ9 597 aa18.3■□□□□ 0.52
PDAP1-204ENST00000496335 MAP1SQ66K74 1059 aaPredicted RBP18.3■□□□□ 0.52
PDAP1-204ENST00000496335 DNAJC5GQ8N7S2 189 aa18.3■□□□□ 0.52
PDAP1-204ENST00000496335 KAZALD1Q96I82 304 aa18.3■□□□□ 0.52
PDAP1-204ENST00000496335 ZBTB12Q9Y330 459 aaPredicted RBP18.3■□□□□ 0.52
PDAP1-204ENST00000496335 SHTN1A0MZ66 631 aa18.29■□□□□ 0.52
PDAP1-204ENST00000496335 CCT4P50991 539 aaKnown RBP18.29■□□□□ 0.52
PDAP1-204ENST00000496335 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
PDAP1-204ENST00000496335 ZNF594Q96JF6 807 aaPredicted RBP18.29■□□□□ 0.52
PDAP1-204ENST00000496335 NOB1Q9ULX3 412 aaKnown RBP18.29■□□□□ 0.52
PDAP1-204ENST00000496335 UTYO14607 1347 aa18.28■□□□□ 0.52
PDAP1-204ENST00000496335 ITGBL1O95965 494 aaPredicted RBP18.28■□□□□ 0.52
PDAP1-204ENST00000496335 CHRNDQ07001 517 aa18.27■□□□□ 0.52
PDAP1-204ENST00000496335 CCDC57Q2TAC2 916 aa18.27■□□□□ 0.52
PDAP1-204ENST00000496335 USP50Q70EL3 339 aaPredicted RBP18.27■□□□□ 0.52
PDAP1-204ENST00000496335 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
PDAP1-204ENST00000496335 HELBQ8NG08 1087 aaPredicted RBP18.27■□□□□ 0.52
PDAP1-204ENST00000496335 USP44Q9H0E7 712 aa18.27■□□□□ 0.52
PDAP1-204ENST00000496335 ADARB2Q9NS39 739 aaKnown RBP18.27■□□□□ 0.52
PDAP1-204ENST00000496335 CNOT7Q9UIV1 285 aaKnown RBP18.27■□□□□ 0.52
PDAP1-204ENST00000496335 SNAP23O00161 211 aa18.26■□□□□ 0.51
PDAP1-204ENST00000496335 TXNRD3Q86VQ6 643 aa18.26■□□□□ 0.51
PDAP1-204ENST00000496335 ANKRD2Q9GZV1 360 aa18.26■□□□□ 0.51
PDAP1-204ENST00000496335 BICC1Q9H694 974 aaKnown RBP18.26■□□□□ 0.51
PDAP1-204ENST00000496335 LEMD3Q9Y2U8 911 aa18.26■□□□□ 0.51
PDAP1-204ENST00000496335 PASKQ96RG2 1323 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 A0A1B0GUL6 1792 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 TAF5LO75529 589 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 KLRK1P26718 216 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
PDAP1-204ENST00000496335 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 MICALL2Q8IY33 904 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 DPF2Q92785 391 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 PSME4Q14997 1843 aa18.25■□□□□ 0.51
PDAP1-204ENST00000496335 ZNF804BA4D1E1 1349 aa18.24■□□□□ 0.51
PDAP1-204ENST00000496335 VIL1P09327 827 aaKnown RBP18.24■□□□□ 0.51
PDAP1-204ENST00000496335 HIRAP54198 1017 aaPredicted RBP18.24■□□□□ 0.51
PDAP1-204ENST00000496335 LDHAL6AQ6ZMR3 332 aa18.24■□□□□ 0.51
PDAP1-204ENST00000496335 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
PDAP1-204ENST00000496335 TRPM4Q8TD43 1214 aa18.24■□□□□ 0.51
PDAP1-204ENST00000496335 H7C1D1 291 aa18.23■□□□□ 0.51
PDAP1-204ENST00000496335 RPS12P25398 132 aaKnown RBP18.23■□□□□ 0.51
PDAP1-204ENST00000496335 KCNJ4P48050 445 aa18.23■□□□□ 0.51
PDAP1-204ENST00000496335 FMR1Q06787 632 aaKnown RBP eCLIP18.23■□□□□ 0.51
PDAP1-204ENST00000496335 SAMD7Q7Z3H4 446 aa18.23■□□□□ 0.51
PDAP1-204ENST00000496335 PODNQ7Z5L7 613 aa18.23■□□□□ 0.51
PDAP1-204ENST00000496335 KLRG1Q96E93 195 aa18.23■□□□□ 0.51
PDAP1-204ENST00000496335 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
PDAP1-204ENST00000496335 CNNM1Q9NRU3 951 aa18.23■□□□□ 0.51
PDAP1-204ENST00000496335 PLIN1O60240 522 aa18.22■□□□□ 0.51
PDAP1-204ENST00000496335 BCAR3O75815 825 aa18.22■□□□□ 0.51
PDAP1-204ENST00000496335 EGFRP00533 1210 aa18.22■□□□□ 0.51
PDAP1-204ENST00000496335 RABL6Q3YEC7 729 aaPredicted RBP18.22■□□□□ 0.51
PDAP1-204ENST00000496335 PUS3Q9BZE2 481 aaKnown RBP18.22■□□□□ 0.51
PDAP1-204ENST00000496335 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.51
PDAP1-204ENST00000496335 USP17L3A6NCW0 530 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms