RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 BBOX1O75936 387 aa16.78■□□□□ 0.28
PTPN7-218ENST00000496197 DALRD3Q5D0E6 543 aaKnown RBP16.78■□□□□ 0.28
PTPN7-218ENST00000496197 MPHOSPH8Q99549 860 aa16.78■□□□□ 0.28
PTPN7-218ENST00000496197 MINPP1Q9UNW1 487 aa16.78■□□□□ 0.28
PTPN7-218ENST00000496197 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
PTPN7-218ENST00000496197 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
PTPN7-218ENST00000496197 ARAP2Q8WZ64 1704 aa16.78■□□□□ 0.28
PTPN7-218ENST00000496197 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
PTPN7-218ENST00000496197 SNAP23O00161 211 aa16.77■□□□□ 0.28
PTPN7-218ENST00000496197 EYA2O00167 538 aa16.77■□□□□ 0.28
PTPN7-218ENST00000496197 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.28
PTPN7-218ENST00000496197 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.283e-6■□□□□ 10.7
PTPN7-218ENST00000496197 HDAC1Q13547 482 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-218ENST00000496197 HELBQ8NG08 1087 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-218ENST00000496197 CNNM1Q9NRU3 951 aa16.77■□□□□ 0.28
PTPN7-218ENST00000496197 NOP58Q9Y2X3 529 aaKnown RBP16.77■□□□□ 0.28
PTPN7-218ENST00000496197 TAF5LO75529 589 aa16.76■□□□□ 0.27
PTPN7-218ENST00000496197 SASH1O94885 1247 aa16.76■□□□□ 0.27
PTPN7-218ENST00000496197 GPSM2P81274 684 aa16.76■□□□□ 0.27
PTPN7-218ENST00000496197 CHRNDQ07001 517 aa16.76■□□□□ 0.27
PTPN7-218ENST00000496197 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
PTPN7-218ENST00000496197 VGLL2Q8N8G2 317 aa16.76■□□□□ 0.27
PTPN7-218ENST00000496197 HMMRO75330 724 aa16.75■□□□□ 0.27
PTPN7-218ENST00000496197 CIAO1O76071 339 aa16.75■□□□□ 0.27
PTPN7-218ENST00000496197 SBF1O95248 1867 aa16.75■□□□□ 0.27
PTPN7-218ENST00000496197 UTRNP46939 3433 aa16.75■□□□□ 0.27
PTPN7-218ENST00000496197 APBB1O00213 710 aa16.74■□□□□ 0.27
PTPN7-218ENST00000496197 DCTPP1Q9H773 170 aa16.74■□□□□ 0.27
PTPN7-218ENST00000496197 TFCP2Q12800 502 aa16.73■□□□□ 0.27
PTPN7-218ENST00000496197 GPR101Q96P66 508 aaPredicted RBP16.73■□□□□ 0.27
PTPN7-218ENST00000496197 IL15P40933 162 aaPredicted RBP16.73■□□□□ 0.27
PTPN7-218ENST00000496197 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTPN7-218ENST00000496197 METTL24Q5JXM2 366 aa16.73■□□□□ 0.27
PTPN7-218ENST00000496197 TMC4Q7Z404 712 aa16.73■□□□□ 0.27
PTPN7-218ENST00000496197 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
PTPN7-218ENST00000496197 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
PTPN7-218ENST00000496197 ZNF609O15014 1411 aa16.72■□□□□ 0.27
PTPN7-218ENST00000496197 COL4A5P29400 1685 aa16.72■□□□□ 0.27
PTPN7-218ENST00000496197 MROH5Q6ZUA9 1318 aa16.72■□□□□ 0.27
PTPN7-218ENST00000496197 KLRK1P26718 216 aa16.72■□□□□ 0.27
PTPN7-218ENST00000496197 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
PTPN7-218ENST00000496197 POLLQ9UGP5 575 aa16.72■□□□□ 0.27
PTPN7-218ENST00000496197 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
PTPN7-218ENST00000496197 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
PTPN7-218ENST00000496197 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
PTPN7-218ENST00000496197 NFKBIEO00221 500 aa16.71■□□□□ 0.27
PTPN7-218ENST00000496197 SMARCA5O60264 1052 aaPredicted RBP16.71■□□□□ 0.27
PTPN7-218ENST00000496197 PDE8BO95263 885 aa16.71■□□□□ 0.27
PTPN7-218ENST00000496197 PRELPP51888 382 aa16.71■□□□□ 0.27
PTPN7-218ENST00000496197 CCDC93Q567U6 631 aa16.71■□□□□ 0.27
PTPN7-218ENST00000496197 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
PTPN7-218ENST00000496197 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.27
PTPN7-218ENST00000496197 PODXL2Q9NZ53 605 aa16.71■□□□□ 0.27
PTPN7-218ENST00000496197 CHD4Q14839 1912 aa16.71■□□□□ 0.26
PTPN7-218ENST00000496197 XDHP47989 1333 aa16.7■□□□□ 0.26
PTPN7-218ENST00000496197 RASSF7Q02833 373 aa16.7■□□□□ 0.26
PTPN7-218ENST00000496197 OS9Q13438 667 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-218ENST00000496197 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
PTPN7-218ENST00000496197 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
PTPN7-218ENST00000496197 MPNDQ8N594 471 aa16.7■□□□□ 0.26
PTPN7-218ENST00000496197 TBC1D16Q8TBP0 767 aa16.7■□□□□ 0.26
PTPN7-218ENST00000496197 IL1RAPL2Q9NP60 686 aa16.7■□□□□ 0.26
PTPN7-218ENST00000496197 ANKIB1Q9P2G1 1089 aa16.7■□□□□ 0.26
PTPN7-218ENST00000496197 ZNF646O15015 1829 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-218ENST00000496197 DICER1Q9UPY3 1922 aaKnown RBP16.7■□□□□ 0.26
PTPN7-218ENST00000496197 FGFR2P21802 821 aa16.69■□□□□ 0.26
PTPN7-218ENST00000496197 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
PTPN7-218ENST00000496197 TXNRD3Q86VQ6 643 aa16.69■□□□□ 0.26
PTPN7-218ENST00000496197 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
PTPN7-218ENST00000496197 UFL1O94874 794 aa16.68■□□□□ 0.26
PTPN7-218ENST00000496197 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-218ENST00000496197 ANKRD2Q9GZV1 360 aa16.68■□□□□ 0.26
PTPN7-218ENST00000496197 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
PTPN7-218ENST00000496197 CEP126Q9P2H0 1117 aa16.68■□□□□ 0.26
PTPN7-218ENST00000496197 ZNF804BA4D1E1 1349 aa16.68■□□□□ 0.26
PTPN7-218ENST00000496197 TIAM2Q8IVF5 1701 aa16.68■□□□□ 0.26
PTPN7-218ENST00000496197 RAB11FIP3O75154 756 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 TIMM10P62072 90 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 CC2D2BQ6DHV5 1058 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
PTPN7-218ENST00000496197 GCC1Q96CN9 775 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 BCL11AQ9H165 835 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
PTPN7-218ENST00000496197 GGA1Q9UJY5 639 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 GTF3C3Q9Y5Q9 886 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 SCN9AQ15858 1988 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 ADORA1P30542 326 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
PTPN7-218ENST00000496197 GPR162Q16538 588 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 HSP90AB4PQ58FF6 505 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 TNNI3KQ59H18 835 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 FPGT-TNNI3KV9GXZ4 949 aa16.67■□□□□ 0.26
PTPN7-218ENST00000496197 A0A1B0GUL7 405 aa16.66■□□□□ 0.26
PTPN7-218ENST00000496197 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
PTPN7-218ENST00000496197 ATP2B4P23634 1241 aa16.66■□□□□ 0.26
PTPN7-218ENST00000496197 PUM3Q15397 648 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms