RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 PUS3Q9BZE2 481 aaKnown RBP18.35■□□□□ 0.53
HDAC9-226ENST00000496026 SIL1Q9H173 461 aa18.35■□□□□ 0.53
HDAC9-226ENST00000496026 TAOK3Q9H2K8 898 aa18.35■□□□□ 0.53
HDAC9-226ENST00000496026 RASSF7Q02833 373 aa18.34■□□□□ 0.53
HDAC9-226ENST00000496026 CHRNDQ07001 517 aa18.34■□□□□ 0.53
HDAC9-226ENST00000496026 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
HDAC9-226ENST00000496026 ANKRD2Q9GZV1 360 aa18.34■□□□□ 0.53
HDAC9-226ENST00000496026 PA2G4Q9UQ80 394 aaKnown RBP18.34■□□□□ 0.53
HDAC9-226ENST00000496026 ARFGEF1Q9Y6D6 1849 aa18.34■□□□□ 0.53
HDAC9-226ENST00000496026 XDHP47989 1333 aa18.33■□□□□ 0.53
HDAC9-226ENST00000496026 C6orf229H3BNL8 230 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 NFKBIEO00221 500 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 HMMRO75330 724 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 POLA2Q14181 598 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 LRRC24Q50LG9 513 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 SUPT20HQ8NEM7 779 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 SSH3Q8TE77 659 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 PSMD1Q99460 953 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 COPRSQ9NQ92 184 aa18.33■□□□□ 0.52
HDAC9-226ENST00000496026 MROH5Q6ZUA9 1318 aa18.32■□□□□ 0.52
HDAC9-226ENST00000496026 EYA2O00167 538 aa18.32■□□□□ 0.52
HDAC9-226ENST00000496026 AAMPQ13685 434 aa18.32■□□□□ 0.52
HDAC9-226ENST00000496026 METTL24Q5JXM2 366 aa18.32■□□□□ 0.52
HDAC9-226ENST00000496026 PODXL2Q9NZ53 605 aa18.32■□□□□ 0.52
HDAC9-226ENST00000496026 GGA1Q9UJY5 639 aa18.32■□□□□ 0.52
HDAC9-226ENST00000496026 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
HDAC9-226ENST00000496026 RIPOR2Q9Y4F9 1068 aa18.32■□□□□ 0.52
HDAC9-226ENST00000496026 LTBP3Q9NS15 1303 aa18.31■□□□□ 0.52
HDAC9-226ENST00000496026 CIAO1O76071 339 aa18.31■□□□□ 0.52
HDAC9-226ENST00000496026 UFL1O94874 794 aa18.31■□□□□ 0.52
HDAC9-226ENST00000496026 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
HDAC9-226ENST00000496026 KCNJ4P48050 445 aa18.31■□□□□ 0.52
HDAC9-226ENST00000496026 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
HDAC9-226ENST00000496026 ZNF277Q9NRM2 450 aaPredicted RBP18.31■□□□□ 0.52
HDAC9-226ENST00000496026 SNED1Q8TER0 1413 aa18.31■□□□□ 0.52
HDAC9-226ENST00000496026 TAF5LO75529 589 aa18.3■□□□□ 0.52
HDAC9-226ENST00000496026 G3BP1Q13283 466 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDAC9-226ENST00000496026 OS9Q13438 667 aaPredicted RBP18.3■□□□□ 0.52
HDAC9-226ENST00000496026 TBC1D16Q8TBP0 767 aa18.3■□□□□ 0.52
HDAC9-226ENST00000496026 RTFDC1Q9BY42 306 aaPredicted RBP18.3■□□□□ 0.52
HDAC9-226ENST00000496026 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
HDAC9-226ENST00000496026 SPEF2Q9C093 1822 aa18.29■□□□□ 0.52
HDAC9-226ENST00000496026 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
HDAC9-226ENST00000496026 LMNB1P20700 586 aa18.29■□□□□ 0.52
HDAC9-226ENST00000496026 IL15P40933 162 aaPredicted RBP18.29■□□□□ 0.52
HDAC9-226ENST00000496026 ATG9AQ7Z3C6 839 aa18.29■□□□□ 0.52
HDAC9-226ENST00000496026 SIRT2Q8IXJ6 389 aa18.29■□□□□ 0.52
HDAC9-226ENST00000496026 EYA3Q99504 573 aa18.29■□□□□ 0.52
HDAC9-226ENST00000496026 POLLQ9UGP5 575 aa18.29■□□□□ 0.52
HDAC9-226ENST00000496026 LEMD3Q9Y2U8 911 aa18.29■□□□□ 0.52
HDAC9-226ENST00000496026 PPIP5K2O43314 1243 aa18.28■□□□□ 0.52
HDAC9-226ENST00000496026 IARSP41252 1262 aaKnown RBP18.28■□□□□ 0.52
HDAC9-226ENST00000496026 WASHC4Q2M389 1173 aa18.28■□□□□ 0.52
HDAC9-226ENST00000496026 RNF181Q9P0P0 153 aa18.28■□□□□ 0.52
HDAC9-226ENST00000496026 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
HDAC9-226ENST00000496026 PCDHB15Q9Y5E8 787 aa18.28■□□□□ 0.52
HDAC9-226ENST00000496026 ZNF804BA4D1E1 1349 aa18.27■□□□□ 0.52
HDAC9-226ENST00000496026 NEFLP07196 543 aa18.27■□□□□ 0.52
HDAC9-226ENST00000496026 AOC3Q16853 763 aa18.27■□□□□ 0.52
HDAC9-226ENST00000496026 C9orf131Q5VYM1 1079 aa18.27■□□□□ 0.52
HDAC9-226ENST00000496026 LARGE2Q8N3Y3 721 aa18.27■□□□□ 0.52
HDAC9-226ENST00000496026 GPR101Q96P66 508 aaPredicted RBP18.27■□□□□ 0.52
HDAC9-226ENST00000496026 ZC3H12CQ9C0D7 883 aaKnown RBP18.27■□□□□ 0.52
HDAC9-226ENST00000496026 RIMBP2O15034 1052 aa18.26■□□□□ 0.51
HDAC9-226ENST00000496026 PDE8BO95263 885 aa18.26■□□□□ 0.51
HDAC9-226ENST00000496026 PRELPP51888 382 aa18.26■□□□□ 0.51
HDAC9-226ENST00000496026 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
HDAC9-226ENST00000496026 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
HDAC9-226ENST00000496026 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
HDAC9-226ENST00000496026 FER1L6Q2WGJ9 1857 aa18.25■□□□□ 0.51
HDAC9-226ENST00000496026 WTIPA6NIX2 430 aaPredicted RBP18.25■□□□□ 0.51
HDAC9-226ENST00000496026 G3V3G9 751 aa18.25■□□□□ 0.51
HDAC9-226ENST00000496026 SNAP23O00161 211 aa18.25■□□□□ 0.51
HDAC9-226ENST00000496026 KIAA2012Q0VF49 1180 aa18.25■□□□□ 0.51
HDAC9-226ENST00000496026 UBE4AQ14139 1066 aa18.25■□□□□ 0.51
HDAC9-226ENST00000496026 DCAF8Q5TAQ9 597 aa18.25■□□□□ 0.51
HDAC9-226ENST00000496026 EXOC6BQ9Y2D4 811 aa18.25■□□□□ 0.51
HDAC9-226ENST00000496026 DUOX1Q9NRD9 1551 aa18.25■□□□□ 0.51
HDAC9-226ENST00000496026 TFCP2Q12800 502 aa18.24■□□□□ 0.51
HDAC9-226ENST00000496026 PUM3Q15397 648 aaKnown RBP18.24■□□□□ 0.51
HDAC9-226ENST00000496026 NIM1KQ8IY84 436 aa18.24■□□□□ 0.51
HDAC9-226ENST00000496026 VGLL2Q8N8G2 317 aa18.24■□□□□ 0.51
HDAC9-226ENST00000496026 JDP2Q8WYK2 163 aa18.24■□□□□ 0.51
HDAC9-226ENST00000496026 ERC1Q8IUD2 1116 aa18.23■□□□□ 0.51
HDAC9-226ENST00000496026 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
HDAC9-226ENST00000496026 APBB1O00213 710 aa18.22■□□□□ 0.51
HDAC9-226ENST00000496026 SASH1O94885 1247 aa18.22■□□□□ 0.51
HDAC9-226ENST00000496026 SLC5A1P13866 664 aa18.22■□□□□ 0.51
HDAC9-226ENST00000496026 ATP2B3Q16720 1220 aa18.22■□□□□ 0.51
HDAC9-226ENST00000496026 DOK7Q18PE1 504 aa18.22■□□□□ 0.51
HDAC9-226ENST00000496026 AKAP2Q9Y2D5 859 aa18.22■□□□□ 0.51
HDAC9-226ENST00000496026 LTBP1Q14766 1721 aa18.22■□□□□ 0.51
HDAC9-226ENST00000496026 RAB11FIP3O75154 756 aa18.21■□□□□ 0.51
HDAC9-226ENST00000496026 IFIT1P09914 478 aaKnown RBP18.21■□□□□ 0.51
HDAC9-226ENST00000496026 KLRK1P26718 216 aa18.21■□□□□ 0.51
HDAC9-226ENST00000496026 LPIN2Q92539 896 aa18.21■□□□□ 0.51
HDAC9-226ENST00000496026 FGFR2P21802 821 aa18.2■□□□□ 0.5
HDAC9-226ENST00000496026 HDAC1Q13547 482 aaPredicted RBP18.2■□□□□ 0.5
HDAC9-226ENST00000496026 C15orf52Q6ZUT6 534 aaKnown RBP18.2■□□□□ 0.5
HDAC9-226ENST00000496026 TXNRD3Q86VQ6 643 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms