RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 COL4A5P29400 1685 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 PLIN1O60240 522 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 WASHC4Q2M389 1173 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 DPY19L2Q6NUT2 758 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 NIM1KQ8IY84 436 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 DZIP1LQ8IYY4 767 aaKnown RBP12.33□□□□□ -0.44
CALD1-223ENST00000496024 HELBQ8NG08 1087 aaPredicted RBP12.33□□□□□ -0.44
CALD1-223ENST00000496024 TBC1D16Q8TBP0 767 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 RTFDC1Q9BY42 306 aaPredicted RBP12.33□□□□□ -0.44
CALD1-223ENST00000496024 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 GGA1Q9UJY5 639 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 KDM2BQ8NHM5 1336 aa12.33□□□□□ -0.44
CALD1-223ENST00000496024 DUOX1Q9NRD9 1551 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 GLTPD2A6NH11 291 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 WTIPA6NIX2 430 aaPredicted RBP12.32□□□□□ -0.44
CALD1-223ENST00000496024 DDNO94850 711 aaPredicted RBP12.32□□□□□ -0.44
CALD1-223ENST00000496024 RLBP1P12271 317 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 ITPRIPQ8IWB1 547 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 LRRFIP2Q9Y608 721 aaKnown RBP12.32□□□□□ -0.44
CALD1-223ENST00000496024 XDHP47989 1333 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
CALD1-223ENST00000496024 ZC3H4Q9UPT8 1303 aaKnown RBP12.32□□□□□ -0.44
CALD1-223ENST00000496024 G3V3G9 751 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 GNAI3P08754 354 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 EIF6P56537 245 aaKnown RBP12.31□□□□□ -0.44
CALD1-223ENST00000496024 CHRNDQ07001 517 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 KIAA2012Q0VF49 1180 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
CALD1-223ENST00000496024 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 EYA3Q99504 573 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 PUS3Q9BZE2 481 aaKnown RBP12.31□□□□□ -0.44
CALD1-223ENST00000496024 ZC3H12CQ9C0D7 883 aaKnown RBP12.31□□□□□ -0.44
CALD1-223ENST00000496024 DBNDD1Q9H9R9 158 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 PODXL2Q9NZ53 605 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 GJA3Q9Y6H8 435 aa12.31□□□□□ -0.44
CALD1-223ENST00000496024 FZD9O00144 591 aa12.3□□□□□ -0.44
CALD1-223ENST00000496024 SNAP23O00161 211 aa12.3□□□□□ -0.44
CALD1-223ENST00000496024 TAF5LO75529 589 aa12.3□□□□□ -0.44
CALD1-223ENST00000496024 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
CALD1-223ENST00000496024 KCNJ4P48050 445 aa12.3□□□□□ -0.44
CALD1-223ENST00000496024 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
CALD1-223ENST00000496024 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
CALD1-223ENST00000496024 LTBP1Q14766 1721 aa12.3□□□□□ -0.44
CALD1-223ENST00000496024 RAD17O75943 681 aa12.29□□□□□ -0.44
CALD1-223ENST00000496024 ANKRD2Q9GZV1 360 aa12.29□□□□□ -0.44
CALD1-223ENST00000496024 HDAC5Q9UQL6 1122 aa12.29□□□□□ -0.44
CALD1-223ENST00000496024 KIF3CO14782 793 aa12.28□□□□□ -0.44
CALD1-223ENST00000496024 GNAI2P04899 355 aa12.28□□□□□ -0.44
CALD1-223ENST00000496024 LRRC24Q50LG9 513 aa12.28□□□□□ -0.44
CALD1-223ENST00000496024 C16orf71Q8IYS4 520 aaPredicted RBP12.28□□□□□ -0.44
CALD1-223ENST00000496024 C1orf115Q9H7X2 142 aa12.28□□□□□ -0.44
CALD1-223ENST00000496024 LEMD3Q9Y2U8 911 aa12.28□□□□□ -0.44
CALD1-223ENST00000496024 ZNF804BA4D1E1 1349 aa12.28□□□□□ -0.44
CALD1-223ENST00000496024 YDJCA8MPS7 323 aa12.27□□□□□ -0.45
CALD1-223ENST00000496024 ECE2O60344 883 aa12.27□□□□□ -0.45
CALD1-223ENST00000496024 VEGFAP15692 232 aaPredicted RBP12.27□□□□□ -0.45
CALD1-223ENST00000496024 KLRK1P26718 216 aa12.27□□□□□ -0.45
CALD1-223ENST00000496024 CXCL9Q07325 125 aa12.27□□□□□ -0.45
CALD1-223ENST00000496024 METTL24Q5JXM2 366 aa12.27□□□□□ -0.45
CALD1-223ENST00000496024 SIL1Q9H173 461 aa12.27□□□□□ -0.45
CALD1-223ENST00000496024 KCNQ5Q9NR82 932 aa12.27□□□□□ -0.45
CALD1-223ENST00000496024 COG6Q9Y2V7 657 aa12.27□□□□□ -0.45
CALD1-223ENST00000496024 A0A1B0GUL6 1792 aa12.26□□□□□ -0.45
CALD1-223ENST00000496024 POTECB2RU33 542 aa12.26□□□□□ -0.45
CALD1-223ENST00000496024 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
CALD1-223ENST00000496024 MS4A1P11836 297 aa12.26□□□□□ -0.45
CALD1-223ENST00000496024 RFX5P48382 616 aaPredicted RBP12.26□□□□□ -0.45
CALD1-223ENST00000496024 CIAPIN1Q6FI81 312 aa12.26□□□□□ -0.45
CALD1-223ENST00000496024 TXNRD3Q86VQ6 643 aa12.26□□□□□ -0.45
CALD1-223ENST00000496024 GPC2Q8N158 579 aa12.26□□□□□ -0.45
CALD1-223ENST00000496024 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
CALD1-223ENST00000496024 PA2G4Q9UQ80 394 aaKnown RBP12.26□□□□□ -0.45
CALD1-223ENST00000496024 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
CALD1-223ENST00000496024 ZBTB7BO15156 539 aaPredicted RBP12.25□□□□□ -0.45
CALD1-223ENST00000496024 PTPN12Q05209 780 aaKnown RBP12.25□□□□□ -0.45
CALD1-223ENST00000496024 TNIP1Q15025 636 aa12.25□□□□□ -0.45
CALD1-223ENST00000496024 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
CALD1-223ENST00000496024 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
CALD1-223ENST00000496024 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
CALD1-223ENST00000496024 SCN9AQ15858 1988 aa12.25□□□□□ -0.45
CALD1-223ENST00000496024 EYA2O00167 538 aa12.24□□□□□ -0.45
CALD1-223ENST00000496024 PSMD14O00487 310 aa12.24□□□□□ -0.45
CALD1-223ENST00000496024 GMPSP49915 693 aaPredicted RBP12.24□□□□□ -0.45
CALD1-223ENST00000496024 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
CALD1-223ENST00000496024 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
CALD1-223ENST00000496024 HACL1Q9UJ83 578 aa12.24□□□□□ -0.45
CALD1-223ENST00000496024 MED23Q9ULK4 1368 aa12.24□□□□□ -0.45
CALD1-223ENST00000496024 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
CALD1-223ENST00000496024 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
CALD1-223ENST00000496024 IQCA1LA6NCM1 817 aa12.23□□□□□ -0.45
CALD1-223ENST00000496024 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
CALD1-223ENST00000496024 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
CALD1-223ENST00000496024 L3MBTL3Q96JM7 780 aaPredicted RBP12.23□□□□□ -0.45
CALD1-223ENST00000496024 SHTN1A0MZ66 631 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms