RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 PCDHB15Q9Y5E8 787 aa19.21■□□□□ 0.67
RAPGEF3-215ENST00000495953 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
RAPGEF3-215ENST00000495953 CIAO1O76071 339 aa19.2■□□□□ 0.66
RAPGEF3-215ENST00000495953 SIRT2Q8IXJ6 389 aa19.2■□□□□ 0.66
RAPGEF3-215ENST00000495953 HSP90AB4PQ58FF6 505 aa19.19■□□□□ 0.66
RAPGEF3-215ENST00000495953 C7orf43Q8WVR3 580 aa19.19■□□□□ 0.66
RAPGEF3-215ENST00000495953 ZNF594Q96JF6 807 aaPredicted RBP19.19■□□□□ 0.66
RAPGEF3-215ENST00000495953 CNNM1Q9NRU3 951 aa19.19■□□□□ 0.66
RAPGEF3-215ENST00000495953 NOP58Q9Y2X3 529 aaKnown RBP19.19■□□□□ 0.66
RAPGEF3-215ENST00000495953 COL4A1P02462 1669 aa19.18■□□□□ 0.66
RAPGEF3-215ENST00000495953 EYA2O00167 538 aa19.18■□□□□ 0.66
RAPGEF3-215ENST00000495953 HDAC1Q13547 482 aaPredicted RBP19.18■□□□□ 0.66
RAPGEF3-215ENST00000495953 ANKRD2Q9GZV1 360 aa19.18■□□□□ 0.66
RAPGEF3-215ENST00000495953 IL15P40933 162 aaPredicted RBP19.17■□□□□ 0.66
RAPGEF3-215ENST00000495953 G3BP1Q13283 466 aaKnown RBP eCLIP19.17■□□□□ 0.66
RAPGEF3-215ENST00000495953 ARHGAP27Q6ZUM4 889 aa19.17■□□□□ 0.66
RAPGEF3-215ENST00000495953 KLHDC4Q8TBB5 520 aa19.17■□□□□ 0.66
RAPGEF3-215ENST00000495953 RWDD1Q9H446 243 aaPredicted RBP19.17■□□□□ 0.66
RAPGEF3-215ENST00000495953 RIPOR2Q9Y4F9 1068 aa19.17■□□□□ 0.66
RAPGEF3-215ENST00000495953 MROH5Q6ZUA9 1318 aa19.17■□□□□ 0.66
RAPGEF3-215ENST00000495953 SURF6O75683 361 aaKnown RBP19.16■□□□□ 0.66
RAPGEF3-215ENST00000495953 CCDC93Q567U6 631 aa19.16■□□□□ 0.66
RAPGEF3-215ENST00000495953 RTKN2Q8IZC4 609 aa19.16■□□□□ 0.66
RAPGEF3-215ENST00000495953 ZNF526Q8TF50 670 aaPredicted RBP19.16■□□□□ 0.66
RAPGEF3-215ENST00000495953 GPBP1L1Q9HC44 474 aaPredicted RBP19.16■□□□□ 0.66
RAPGEF3-215ENST00000495953 MINPP1Q9UNW1 487 aa19.16■□□□□ 0.66
RAPGEF3-215ENST00000495953 PA2G4Q9UQ80 394 aaKnown RBP19.16■□□□□ 0.66
RAPGEF3-215ENST00000495953 A0A1B0GUL6 1792 aa19.16■□□□□ 0.66
RAPGEF3-215ENST00000495953 C21orf2O43822 256 aa19.15■□□□□ 0.66
RAPGEF3-215ENST00000495953 RASSF7Q02833 373 aa19.15■□□□□ 0.66
RAPGEF3-215ENST00000495953 LRRC24Q50LG9 513 aa19.15■□□□□ 0.66
RAPGEF3-215ENST00000495953 ATG9AQ7Z3C6 839 aa19.15■□□□□ 0.66
RAPGEF3-215ENST00000495953 ERC1Q8IUD2 1116 aa19.15■□□□□ 0.66
RAPGEF3-215ENST00000495953 PUS3Q9BZE2 481 aaKnown RBP19.15■□□□□ 0.66
RAPGEF3-215ENST00000495953 PODXL2Q9NZ53 605 aa19.15■□□□□ 0.66
RAPGEF3-215ENST00000495953 SIL1Q9H173 461 aa19.14■□□□□ 0.65
RAPGEF3-215ENST00000495953 DCTPP1Q9H773 170 aa19.14■□□□□ 0.65
RAPGEF3-215ENST00000495953 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
RAPGEF3-215ENST00000495953 XDHP47989 1333 aa19.14■□□□□ 0.65
RAPGEF3-215ENST00000495953 FER1L6Q2WGJ9 1857 aa19.14■□□□□ 0.65
RAPGEF3-215ENST00000495953 RAB11FIP3O75154 756 aa19.13■□□□□ 0.65
RAPGEF3-215ENST00000495953 PRELPP51888 382 aa19.13■□□□□ 0.65
RAPGEF3-215ENST00000495953 CHRNDQ07001 517 aa19.13■□□□□ 0.65
RAPGEF3-215ENST00000495953 MPNDQ8N594 471 aa19.13■□□□□ 0.65
RAPGEF3-215ENST00000495953 LTBP1Q14766 1721 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 TIAM2Q8IVF5 1701 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 OS9Q13438 667 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 METTL24Q5JXM2 366 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 SLC51AQ86UW1 340 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 SUPT20HQ8NEM7 779 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 GCC1Q96CN9 775 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 ANKIB1Q9P2G1 1089 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 CEP126Q9P2H0 1117 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 NSFL1CQ9UNZ2 370 aaKnown RBP19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 LEMD3Q9Y2U8 911 aa19.12■□□□□ 0.65
RAPGEF3-215ENST00000495953 SNED1Q8TER0 1413 aa19.11■□□□□ 0.65
RAPGEF3-215ENST00000495953 PDE8BO95263 885 aa19.11■□□□□ 0.65
RAPGEF3-215ENST00000495953 ATP2B4P23634 1241 aa19.11■□□□□ 0.65
RAPGEF3-215ENST00000495953 DPP8Q6V1X1 898 aaPredicted RBP19.11■□□□□ 0.65
RAPGEF3-215ENST00000495953 PSMD1Q99460 953 aa19.11■□□□□ 0.65
RAPGEF3-215ENST00000495953 RTFDC1Q9BY42 306 aaPredicted RBP19.11■□□□□ 0.65
RAPGEF3-215ENST00000495953 LTBP3Q9NS15 1303 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 GPSM2P81274 684 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 UBE4AQ14139 1066 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 VGLL2Q8N8G2 317 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 VPS33BQ9H267 617 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 GPR108Q9NPR9 543 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 GGA1Q9UJY5 639 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 EXOC6BQ9Y2D4 811 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 AKAP2Q9Y2D5 859 aa19.1■□□□□ 0.65
RAPGEF3-215ENST00000495953 SASH1O94885 1247 aa19.09■□□□□ 0.65
RAPGEF3-215ENST00000495953 FKBP4Q02790 459 aaKnown RBP eCLIP19.08■□□□□ 0.64
RAPGEF3-215ENST00000495953 C9orf131Q5VYM1 1079 aa19.08■□□□□ 0.64
RAPGEF3-215ENST00000495953 OLFM4Q6UX06 510 aa19.08■□□□□ 0.64
RAPGEF3-215ENST00000495953 HELBQ8NG08 1087 aaPredicted RBP19.08■□□□□ 0.64
RAPGEF3-215ENST00000495953 TBC1D16Q8TBP0 767 aa19.08■□□□□ 0.64
RAPGEF3-215ENST00000495953 EYA3Q99504 573 aa19.08■□□□□ 0.64
RAPGEF3-215ENST00000495953 PPP4R2Q9NY27 417 aa19.08■□□□□ 0.64
RAPGEF3-215ENST00000495953 CEP350Q5VT06 3117 aa19.08■□□□□ 0.64
RAPGEF3-215ENST00000495953 ZNF804BA4D1E1 1349 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 NFKBIEO00221 500 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 TAF5LO75529 589 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 UFL1O94874 794 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 IGHDP01880 384 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 KCNJ4P48050 445 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 TFCP2Q12800 502 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 PUM3Q15397 648 aaKnown RBP19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 SMC5Q8IY18 1101 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 RHPN1Q8TCX5 695 aa19.07■□□□□ 0.64
RAPGEF3-215ENST00000495953 DUOX1Q9NRD9 1551 aa19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 DICER1Q9UPY3 1922 aaKnown RBP19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 C6orf229H3BNL8 230 aa19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 C15orf52Q6ZUT6 534 aaKnown RBP19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 LPIN2Q92539 896 aa19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 LRRCC1Q9C099 1032 aa19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 TAOK3Q9H2K8 898 aa19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 RNF181Q9P0P0 153 aa19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 POLLQ9UGP5 575 aa19.06■□□□□ 0.64
RAPGEF3-215ENST00000495953 IFIT1P09914 478 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms