RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 AACSQ86V21 672 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 SMC1BQ8NDV3 1235 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 GPATCH3Q96I76 525 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
ECHDC3-204ENST00000495787 SDSP20132 328 aa13.14□□□□□ -0.31
ECHDC3-204ENST00000495787 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
ECHDC3-204ENST00000495787 ATG9AQ7Z3C6 839 aa13.14□□□□□ -0.31
ECHDC3-204ENST00000495787 EAF2Q96CJ1 260 aaPredicted RBP13.14□□□□□ -0.31
ECHDC3-204ENST00000495787 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
ECHDC3-204ENST00000495787 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
ECHDC3-204ENST00000495787 TNRC6CQ9HCJ0 1690 aaKnown RBP13.14□□□□□ -0.31
ECHDC3-204ENST00000495787 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 ANKRD18BA2A2Z9 1011 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 FAM177BA6PVY3 158 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 ERC2O15083 957 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 SEC24BO95487 1268 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 TFCP2Q12800 502 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 PI4K2BQ8TCG2 481 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 UPF2Q9HAU5 1272 aaKnown RBP13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
ECHDC3-204ENST00000495787 RTL9Q8NET4 1388 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 ITGA6P23229 1130 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 SETDB2Q96T68 719 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 GREM2Q9H772 168 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
ECHDC3-204ENST00000495787 CCDC152Q4G0S7 254 aa13.11□□□□□ -0.31
ECHDC3-204ENST00000495787 LRRC24Q50LG9 513 aa13.11□□□□□ -0.31
ECHDC3-204ENST00000495787 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
ECHDC3-204ENST00000495787 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
ECHDC3-204ENST00000495787 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
ECHDC3-204ENST00000495787 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
ECHDC3-204ENST00000495787 CCDC8Q9H0W5 538 aaPredicted RBP13.11□□□□□ -0.31
ECHDC3-204ENST00000495787 CHRNA5P30532 468 aa13.1□□□□□ -0.31
ECHDC3-204ENST00000495787 DDR1Q08345 913 aa13.1□□□□□ -0.31
ECHDC3-204ENST00000495787 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
ECHDC3-204ENST00000495787 PUS3Q9BZE2 481 aaKnown RBP13.1□□□□□ -0.31
ECHDC3-204ENST00000495787 CEP126Q9P2H0 1117 aa13.1□□□□□ -0.31
ECHDC3-204ENST00000495787 TRIM6-TRIM34B2RNG4 842 aa13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 ZNF609O15014 1411 aa13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 HSPA1AP0DMV8 641 aaKnown RBP13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 HSPA1BP0DMV9 641 aaKnown RBP13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 VEGFAP15692 232 aaPredicted RBP13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 GTF2E1P29083 439 aaPredicted RBP13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 MFAP1P55081 439 aaKnown RBP13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 TPTE2Q6XPS3 522 aa13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 LDHAL6AQ6ZMR3 332 aa13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 CNTROBQ8N137 903 aa13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 AKAP2Q9Y2D5 859 aa13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 RIPOR2Q9Y4F9 1068 aa13.09□□□□□ -0.31
ECHDC3-204ENST00000495787 SBF1O95248 1867 aa13.08□□□□□ -0.32
ECHDC3-204ENST00000495787 RILPL2Q969X0 211 aa13.08□□□□□ -0.32
ECHDC3-204ENST00000495787 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
ECHDC3-204ENST00000495787 CNNM1Q9NRU3 951 aa13.08□□□□□ -0.32
ECHDC3-204ENST00000495787 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
ECHDC3-204ENST00000495787 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.32
ECHDC3-204ENST00000495787 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
ECHDC3-204ENST00000495787 SPEF2Q9C093 1822 aa13.07□□□□□ -0.32
ECHDC3-204ENST00000495787 GLTPD2A6NH11 291 aa13.07□□□□□ -0.32
ECHDC3-204ENST00000495787 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
ECHDC3-204ENST00000495787 ATP5JP18859 108 aa13.07□□□□□ -0.32
ECHDC3-204ENST00000495787 LMNB1P20700 586 aa13.07□□□□□ -0.32
ECHDC3-204ENST00000495787 NFIXQ14938 502 aa13.07□□□□□ -0.32
ECHDC3-204ENST00000495787 DBNDD2Q9BQY9 259 aa13.07□□□□□ -0.32
ECHDC3-204ENST00000495787 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 CHMLP26374 656 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 RASSF7Q02833 373 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 METTL24Q5JXM2 366 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 EVI5LQ96CN4 794 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 NEUROD6Q96NK8 337 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 CDC5LQ99459 802 aaKnown RBP13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 SEC31BQ9NQW1 1179 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 MROH5Q6ZUA9 1318 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
ECHDC3-204ENST00000495787 A0A1B0GUL7 405 aa13.05□□□□□ -0.32
ECHDC3-204ENST00000495787 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
ECHDC3-204ENST00000495787 TM4SF1P30408 202 aa13.05□□□□□ -0.32
ECHDC3-204ENST00000495787 TIMM10P62072 90 aa13.05□□□□□ -0.32
ECHDC3-204ENST00000495787 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
ECHDC3-204ENST00000495787 MPHOSPH8Q99549 860 aa13.05□□□□□ -0.32
ECHDC3-204ENST00000495787 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
ECHDC3-204ENST00000495787 VGLL2Q8N8G2 317 aa13.04□□□□□ -0.32
ECHDC3-204ENST00000495787 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms