RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 IL15P40933 162 aaPredicted RBP24.13■■□□□ 1.45
ATG3-208ENST00000495756 OS9Q13438 667 aaPredicted RBP24.13■■□□□ 1.45
ATG3-208ENST00000495756 TMC4Q7Z404 712 aa24.13■■□□□ 1.45
ATG3-208ENST00000495756 TTLL6Q8N841 843 aa24.13■■□□□ 1.45
ATG3-208ENST00000495756 GCC1Q96CN9 775 aa24.13■■□□□ 1.45
ATG3-208ENST00000495756 BRCA1P38398 1863 aaKnown RBP24.12■■□□□ 1.45
ATG3-208ENST00000495756 SLX4Q8IY92 1834 aa24.12■■□□□ 1.45
ATG3-208ENST00000495756 SMC5Q8IY18 1101 aa24.12■■□□□ 1.45
ATG3-208ENST00000495756 SYT17Q9BSW7 474 aa24.12■■□□□ 1.45
ATG3-208ENST00000495756 RAB11FIP3O75154 756 aa24.11■■□□□ 1.45
ATG3-208ENST00000495756 KDM2BQ8NHM5 1336 aa24.11■■□□□ 1.45
ATG3-208ENST00000495756 ERC1Q8IUD2 1116 aa24.1■■□□□ 1.45
ATG3-208ENST00000495756 MINPP1Q9UNW1 487 aa24.1■■□□□ 1.45
ATG3-208ENST00000495756 ATP6V0A2Q9Y487 856 aa24.1■■□□□ 1.45
ATG3-208ENST00000495756 MROH5Q6ZUA9 1318 aa24.1■■□□□ 1.45
ATG3-208ENST00000495756 APBB1O00213 710 aa24.09■■□□□ 1.45
ATG3-208ENST00000495756 SASH1O94885 1247 aa24.09■■□□□ 1.45
ATG3-208ENST00000495756 SLC51AQ86UW1 340 aa24.09■■□□□ 1.45
ATG3-208ENST00000495756 SP8Q8IXZ3 490 aa24.09■■□□□ 1.45
ATG3-208ENST00000495756 CHRNDQ07001 517 aa24.08■■□□□ 1.45
ATG3-208ENST00000495756 DALRD3Q5D0E6 543 aaKnown RBP24.08■■□□□ 1.45
ATG3-208ENST00000495756 METTL24Q5JXM2 366 aa24.08■■□□□ 1.45
ATG3-208ENST00000495756 CENPQQ7L2Z9 268 aaPredicted RBP24.08■■□□□ 1.45
ATG3-208ENST00000495756 LRRC37AA6NMS7 1700 aa24.08■■□□□ 1.45
ATG3-208ENST00000495756 C7orf43Q8WVR3 580 aa24.07■■□□□ 1.44
ATG3-208ENST00000495756 TFCP2Q12800 502 aa24.07■■□□□ 1.44
ATG3-208ENST00000495756 VGLL2Q8N8G2 317 aa24.07■■□□□ 1.44
ATG3-208ENST00000495756 RHPN1Q8TCX5 695 aa24.07■■□□□ 1.44
ATG3-208ENST00000495756 KIF1BPQ96EK5 621 aa24.07■■□□□ 1.44
ATG3-208ENST00000495756 CEP126Q9P2H0 1117 aa24.07■■□□□ 1.44
ATG3-208ENST00000495756 WWC3Q9ULE0 1092 aa24.07■■□□□ 1.44
ATG3-208ENST00000495756 A0A1B0GUL6 1792 aa24.06■■□□□ 1.44
ATG3-208ENST00000495756 HELBQ8NG08 1087 aaPredicted RBP24.06■■□□□ 1.44
ATG3-208ENST00000495756 LRRCC1Q9C099 1032 aa24.06■■□□□ 1.44
ATG3-208ENST00000495756 ANKRD2Q9GZV1 360 aa24.06■■□□□ 1.44
ATG3-208ENST00000495756 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
ATG3-208ENST00000495756 PDE8BO95263 885 aa24.05■■□□□ 1.44
ATG3-208ENST00000495756 OLFM4Q6UX06 510 aa24.05■■□□□ 1.44
ATG3-208ENST00000495756 ZNF219Q9P2Y4 722 aaPredicted RBP24.05■■□□□ 1.44
ATG3-208ENST00000495756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.05■■□□□ 1.44
ATG3-208ENST00000495756 C21orf2O43822 256 aa24.04■■□□□ 1.44
ATG3-208ENST00000495756 TAF5LO75529 589 aa24.04■■□□□ 1.44
ATG3-208ENST00000495756 ANKRD45Q5TZF3 282 aa24.04■■□□□ 1.44
ATG3-208ENST00000495756 GPSM2P81274 684 aa24.03■■□□□ 1.44
ATG3-208ENST00000495756 CC2D2BQ6DHV5 1058 aa24.03■■□□□ 1.44
ATG3-208ENST00000495756 ANKIB1Q9P2G1 1089 aa24.03■■□□□ 1.44
ATG3-208ENST00000495756 BCS1LQ9Y276 419 aa24.03■■□□□ 1.44
ATG3-208ENST00000495756 XDHP47989 1333 aa24.03■■□□□ 1.44
ATG3-208ENST00000495756 SMARCA5O60264 1052 aaPredicted RBP24.02■■□□□ 1.44
ATG3-208ENST00000495756 NUCB1Q02818 461 aa24.02■■□□□ 1.44
ATG3-208ENST00000495756 IL1RAPL2Q9NP60 686 aa24.02■■□□□ 1.44
ATG3-208ENST00000495756 NSFL1CQ9UNZ2 370 aaKnown RBP24.02■■□□□ 1.44
ATG3-208ENST00000495756 PODXL2Q9NZ53 605 aa24.01■■□□□ 1.43
ATG3-208ENST00000495756 LTBP1Q14766 1721 aa24.01■■□□□ 1.43
ATG3-208ENST00000495756 PUM3Q15397 648 aaKnown RBP24■■□□□ 1.43
ATG3-208ENST00000495756 MPNDQ8N594 471 aa24■■□□□ 1.43
ATG3-208ENST00000495756 GPR108Q9NPR9 543 aa24■■□□□ 1.43
ATG3-208ENST00000495756 ZBTB47Q9UFB7 747 aaPredicted RBP24■■□□□ 1.43
ATG3-208ENST00000495756 AKAP2Q9Y2D5 859 aa24■■□□□ 1.43
ATG3-208ENST00000495756 SNED1Q8TER0 1413 aa24■■□□□ 1.43
ATG3-208ENST00000495756 GRIPAP1Q4V328 841 aa24■■□□□ 1.43
ATG3-208ENST00000495756 CCDC93Q567U6 631 aa24■■□□□ 1.43
ATG3-208ENST00000495756 TNNI3KQ59H18 835 aa24■■□□□ 1.43
ATG3-208ENST00000495756 SOGA3Q5TF21 947 aa24■■□□□ 1.43
ATG3-208ENST00000495756 CHD1LQ86WJ1 897 aa24■■□□□ 1.43
ATG3-208ENST00000495756 CLASRPQ8N2M8 674 aaKnown RBP24■■□□□ 1.43
ATG3-208ENST00000495756 FPGT-TNNI3KV9GXZ4 949 aa24■■□□□ 1.43
ATG3-208ENST00000495756 ARFGEF1Q9Y6D6 1849 aa23.99■■□□□ 1.43
ATG3-208ENST00000495756 WTIPA6NIX2 430 aaPredicted RBP23.99■■□□□ 1.43
ATG3-208ENST00000495756 SNAP23O00161 211 aa23.99■■□□□ 1.43
ATG3-208ENST00000495756 FGFR2P21802 821 aa23.99■■□□□ 1.43
ATG3-208ENST00000495756 ATP2B3Q16720 1220 aa23.99■■□□□ 1.43
ATG3-208ENST00000495756 DPP8Q6V1X1 898 aaPredicted RBP23.99■■□□□ 1.43
ATG3-208ENST00000495756 BCL11AQ9H165 835 aa23.99■■□□□ 1.43
ATG3-208ENST00000495756 LEMD3Q9Y2U8 911 aa23.99■■□□□ 1.43
ATG3-208ENST00000495756 ZNF609O15014 1411 aa23.98■■□□□ 1.43
ATG3-208ENST00000495756 ZNF804BA4D1E1 1349 aa23.98■■□□□ 1.43
ATG3-208ENST00000495756 KCNJ4P48050 445 aa23.98■■□□□ 1.43
ATG3-208ENST00000495756 UBE4AQ14139 1066 aa23.98■■□□□ 1.43
ATG3-208ENST00000495756 EAF2Q96CJ1 260 aaPredicted RBP23.98■■□□□ 1.43
ATG3-208ENST00000495756 LNPKQ9C0E8 428 aa23.98■■□□□ 1.43
ATG3-208ENST00000495756 GGA1Q9UJY5 639 aa23.98■■□□□ 1.43
ATG3-208ENST00000495756 A0A1B0GUL7 405 aa23.97■■□□□ 1.43
ATG3-208ENST00000495756 ATP2B4P23634 1241 aa23.97■■□□□ 1.43
ATG3-208ENST00000495756 TIMM10P62072 90 aa23.97■■□□□ 1.43
ATG3-208ENST00000495756 RTKN2Q8IZC4 609 aa23.97■■□□□ 1.43
ATG3-208ENST00000495756 TBC1D16Q8TBP0 767 aa23.97■■□□□ 1.43
ATG3-208ENST00000495756 LPIN2Q92539 896 aa23.97■■□□□ 1.43
ATG3-208ENST00000495756 POLLQ9UGP5 575 aa23.97■■□□□ 1.43
ATG3-208ENST00000495756 DUOX1Q9NRD9 1551 aa23.97■■□□□ 1.43
ATG3-208ENST00000495756 UFL1O94874 794 aa23.96■■□□□ 1.43
ATG3-208ENST00000495756 AACSQ86V21 672 aa23.96■■□□□ 1.43
ATG3-208ENST00000495756 NEUROD6Q96NK8 337 aa23.95■■□□□ 1.42
ATG3-208ENST00000495756 UTRNP46939 3433 aa23.94■■□□□ 1.42
ATG3-208ENST00000495756 C6orf229H3BNL8 230 aa23.94■■□□□ 1.42
ATG3-208ENST00000495756 SLC5A1P13866 664 aa23.94■■□□□ 1.42
ATG3-208ENST00000495756 RTFDC1Q9BY42 306 aaPredicted RBP23.94■■□□□ 1.42
ATG3-208ENST00000495756 CCDC8Q9H0W5 538 aaPredicted RBP23.94■■□□□ 1.42
ATG3-208ENST00000495756 IFIT2P09913 472 aaKnown RBP23.94■■□□□ 1.42
ATG3-208ENST00000495756 IFIT1P09914 478 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms