RNA–Protein interactions for RNA: ENST00000495373.5

ARHGEF3-212, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-212ENST00000495373 SCARF1Q14162 830 aa18.29■□□□□ 0.52
ARHGEF3-212ENST00000495373 SLFNL1Q499Z3 407 aa18.29■□□□□ 0.52
ARHGEF3-212ENST00000495373 DNAJC2Q99543 621 aaKnown RBP18.29■□□□□ 0.52
ARHGEF3-212ENST00000495373 RTL9Q8NET4 1388 aa18.29■□□□□ 0.52
ARHGEF3-212ENST00000495373 SF3B3Q15393 1217 aaKnown RBP18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 CASC1Q6TDU7 716 aa18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 CELF1Q92879 486 aaKnown RBP18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 EVI5LQ96CN4 794 aa18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 PDE8BO95263 885 aa18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
ARHGEF3-212ENST00000495373 SGSM2O43147 1006 aa18.27■□□□□ 0.52
ARHGEF3-212ENST00000495373 DDR1Q08345 913 aa18.27■□□□□ 0.52
ARHGEF3-212ENST00000495373 ATP2B3Q16720 1220 aa18.27■□□□□ 0.52
ARHGEF3-212ENST00000495373 DDX46Q7L014 1031 aaKnown RBP18.27■□□□□ 0.52
ARHGEF3-212ENST00000495373 COL23A1Q86Y22 540 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF3-212ENST00000495373 HAUS7Q99871 368 aa18.27■□□□□ 0.52
ARHGEF3-212ENST00000495373 TM4SF1P30408 202 aa18.27■□□□□ 0.51
ARHGEF3-212ENST00000495373 TBC1D2Q9BYX2 928 aa18.27■□□□□ 0.51
ARHGEF3-212ENST00000495373 CARMIL3Q8ND23 1372 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 A0A0D9SFI3 127 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 FGFR2P21802 821 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 TPTE2Q6XPS3 522 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 ANO2Q9NQ90 1003 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 SNRKQ9NRH2 765 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 A0A1B0GUL6 1792 aa18.26■□□□□ 0.51
ARHGEF3-212ENST00000495373 EN1Q05925 392 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 PRR5LQ6MZQ0 368 aa18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 NYXQ9GZU5 481 aa18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 AKAP11Q9UKA4 1901 aa18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 FSD1Q9BTV5 496 aa18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 AKAP2Q9Y2D5 859 aa18.25■□□□□ 0.51
ARHGEF3-212ENST00000495373 GOLIM4O00461 696 aa18.24■□□□□ 0.51
ARHGEF3-212ENST00000495373 REC8O95072 547 aa18.24■□□□□ 0.51
ARHGEF3-212ENST00000495373 CHRNDQ07001 517 aa18.24■□□□□ 0.51
ARHGEF3-212ENST00000495373 LSG1Q9H089 658 aaKnown RBP18.24■□□□□ 0.51
ARHGEF3-212ENST00000495373 PTH1RQ03431 593 aa18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 MROH5Q6ZUA9 1318 aa18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 IFIT1P09914 478 aaKnown RBP18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 PHKA1P46020 1223 aa18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 NLRP3Q96P20 1036 aa18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
ARHGEF3-212ENST00000495373 PNPLA7Q6ZV29 1317 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 ARAP2Q8WZ64 1704 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 SERPINB2P05120 415 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 MCAMP43121 646 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 ILDR2Q71H61 639 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 CNBD1Q8NA66 436 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 CAMKK2Q96RR4 588 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 MYO5AQ9Y4I1 1855 aaKnown RBP18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 POLRMTO00411 1230 aaKnown RBP18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 ZAP70P43403 619 aa18.22■□□□□ 0.51
ARHGEF3-212ENST00000495373 PUM3Q15397 648 aaKnown RBP18.21■□□□□ 0.51
ARHGEF3-212ENST00000495373 TTC39AQ5SRH9 613 aa18.21■□□□□ 0.51
ARHGEF3-212ENST00000495373 ANKRD18AQ8IVF6 992 aa18.21■□□□□ 0.51
ARHGEF3-212ENST00000495373 RGPD3A6NKT7 1758 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF3-212ENST00000495373 RGPD4Q7Z3J3 1758 aa18.21■□□□□ 0.51
ARHGEF3-212ENST00000495373 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 FKBP4Q02790 459 aaKnown RBP eCLIP18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 GORABQ5T7V8 394 aa18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 CCDC102BQ68D86 513 aa18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 MINPP1Q9UNW1 487 aa18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 CCDC158Q5M9N0 1113 aa18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 DEFB132Q7Z7B7 95 aa18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 KBTBD3Q8NAB2 608 aa18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 LPIN2Q92539 896 aa18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
ARHGEF3-212ENST00000495373 NPHP1O15259 732 aa18.19■□□□□ 0.5
ARHGEF3-212ENST00000495373 KLRK1P26718 216 aa18.19■□□□□ 0.5
ARHGEF3-212ENST00000495373 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
ARHGEF3-212ENST00000495373 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF3-212ENST00000495373 RAD50Q92878 1312 aa18.19■□□□□ 0.5
ARHGEF3-212ENST00000495373 MED23Q9ULK4 1368 aa18.19■□□□□ 0.5
ARHGEF3-212ENST00000495373 RPS8P62241 208 aaKnown RBP18.18■□□□□ 0.5
ARHGEF3-212ENST00000495373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.18■□□□□ 0.5
ARHGEF3-212ENST00000495373 GOLGB1Q14789 3259 aaKnown RBP18.18■□□□□ 0.5
ARHGEF3-212ENST00000495373 BCAMP50895 628 aa18.18■□□□□ 0.5
ARHGEF3-212ENST00000495373 COL9A3Q14050 684 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF3-212ENST00000495373 RASEFQ8IZ41 740 aa18.18■□□□□ 0.5
ARHGEF3-212ENST00000495373 PDGFDQ9GZP0 370 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF3-212ENST00000495373 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF3-212ENST00000495373 SPRYD3Q8NCJ5 442 aa18.17■□□□□ 0.5
ARHGEF3-212ENST00000495373 ANKRD31Q8N7Z5 1873 aa18.17■□□□□ 0.5
ARHGEF3-212ENST00000495373 HSPA4P34932 840 aa18.16■□□□□ 0.5
ARHGEF3-212ENST00000495373 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms