RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
KDM1A-205ENST00000494920 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
KDM1A-205ENST00000494920 MINPP1Q9UNW1 487 aa13.78□□□□□ -0.2
KDM1A-205ENST00000494920 CHMP3Q9Y3E7 222 aa13.78□□□□□ -0.2
KDM1A-205ENST00000494920 SRGAP3O43295 1099 aa13.77□□□□□ -0.21
KDM1A-205ENST00000494920 GRIN3BO60391 1043 aa13.77□□□□□ -0.21
KDM1A-205ENST00000494920 IGHMBP2P38935 993 aaKnown RBP13.77□□□□□ -0.21
KDM1A-205ENST00000494920 GPR162Q16538 588 aa13.77□□□□□ -0.21
KDM1A-205ENST00000494920 GRIPAP1Q4V328 841 aa13.77□□□□□ -0.21
KDM1A-205ENST00000494920 VGLL2Q8N8G2 317 aa13.77□□□□□ -0.21
KDM1A-205ENST00000494920 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
KDM1A-205ENST00000494920 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
KDM1A-205ENST00000494920 PA2G4Q9UQ80 394 aaKnown RBP13.77□□□□□ -0.21
KDM1A-205ENST00000494920 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
KDM1A-205ENST00000494920 ZNF646O15015 1829 aaPredicted RBP13.76□□□□□ -0.21
KDM1A-205ENST00000494920 TIAM2Q8IVF5 1701 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 ARAP2Q8WZ64 1704 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 EYA2O00167 538 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 GPSM2P81274 684 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 RASSF7Q02833 373 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 LRRC24Q50LG9 513 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 RPAP2Q8IXW5 612 aaPredicted RBP13.76□□□□□ -0.21
KDM1A-205ENST00000494920 RTKN2Q8IZC4 609 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 EXOC6Q8TAG9 804 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
KDM1A-205ENST00000494920 XDHP47989 1333 aa13.75□□□□□ -0.21
KDM1A-205ENST00000494920 WTIPA6NIX2 430 aaPredicted RBP13.75□□□□□ -0.21
KDM1A-205ENST00000494920 CIAO1O76071 339 aa13.75□□□□□ -0.21
KDM1A-205ENST00000494920 CENPBP07199 599 aaPredicted RBP13.75□□□□□ -0.21
KDM1A-205ENST00000494920 FKBP4Q02790 459 aaKnown RBP eCLIP13.75□□□□□ -0.21
KDM1A-205ENST00000494920 CHRNDQ07001 517 aa13.75□□□□□ -0.21
KDM1A-205ENST00000494920 AAMPQ13685 434 aa13.75□□□□□ -0.21
KDM1A-205ENST00000494920 LDHAL6AQ6ZMR3 332 aa13.75□□□□□ -0.21
KDM1A-205ENST00000494920 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
KDM1A-205ENST00000494920 MPHOSPH8Q99549 860 aa13.75□□□□□ -0.21
KDM1A-205ENST00000494920 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
KDM1A-205ENST00000494920 POLLQ9UGP5 575 aa13.75□□□□□ -0.21
KDM1A-205ENST00000494920 NOP58Q9Y2X3 529 aaKnown RBP13.75□□□□□ -0.21
KDM1A-205ENST00000494920 SCN9AQ15858 1988 aa13.74□□□□□ -0.21
KDM1A-205ENST00000494920 PSME4Q14997 1843 aa13.74□□□□□ -0.21
KDM1A-205ENST00000494920 TBC1D16Q8TBP0 767 aa13.74□□□□□ -0.21
KDM1A-205ENST00000494920 IRX6P78412 446 aaPredicted RBP13.73□□□□□ -0.21
KDM1A-205ENST00000494920 TAF7LQ5H9L4 462 aa13.73□□□□□ -0.21
KDM1A-205ENST00000494920 MPNDQ8N594 471 aa13.73□□□□□ -0.21
KDM1A-205ENST00000494920 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
KDM1A-205ENST00000494920 MROH5Q6ZUA9 1318 aa13.72□□□□□ -0.21
KDM1A-205ENST00000494920 SNAP23O00161 211 aa13.72□□□□□ -0.21
KDM1A-205ENST00000494920 FGFR2P21802 821 aa13.72□□□□□ -0.21
KDM1A-205ENST00000494920 IL15P40933 162 aaPredicted RBP13.72□□□□□ -0.21
KDM1A-205ENST00000494920 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
KDM1A-205ENST00000494920 ARHGAP27Q6ZUM4 889 aa13.72□□□□□ -0.21
KDM1A-205ENST00000494920 C15orf52Q6ZUT6 534 aaKnown RBP13.72□□□□□ -0.21
KDM1A-205ENST00000494920 ANKRD2Q9GZV1 360 aa13.72□□□□□ -0.21
KDM1A-205ENST00000494920 SIL1Q9H173 461 aa13.72□□□□□ -0.21
KDM1A-205ENST00000494920 CNNM1Q9NRU3 951 aa13.72□□□□□ -0.21
KDM1A-205ENST00000494920 NSFL1CQ9UNZ2 370 aaKnown RBP13.72□□□□□ -0.21
KDM1A-205ENST00000494920 MED23Q9ULK4 1368 aa13.71□□□□□ -0.21
KDM1A-205ENST00000494920 TAF5LO75529 589 aa13.71□□□□□ -0.21
KDM1A-205ENST00000494920 SASH1O94885 1247 aa13.71□□□□□ -0.21
KDM1A-205ENST00000494920 ATP2B4P23634 1241 aa13.71□□□□□ -0.21
KDM1A-205ENST00000494920 KLRK1P26718 216 aa13.71□□□□□ -0.21
KDM1A-205ENST00000494920 KIAA2012Q0VF49 1180 aa13.71□□□□□ -0.21
KDM1A-205ENST00000494920 HELBQ8NG08 1087 aaPredicted RBP13.71□□□□□ -0.21
KDM1A-205ENST00000494920 GPR101Q96P66 508 aaPredicted RBP13.71□□□□□ -0.21
KDM1A-205ENST00000494920 ZNF277Q9NRM2 450 aaPredicted RBP13.71□□□□□ -0.21
KDM1A-205ENST00000494920 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
KDM1A-205ENST00000494920 LEMD3Q9Y2U8 911 aa13.71□□□□□ -0.21
KDM1A-205ENST00000494920 ZNF609O15014 1411 aa13.71□□□□□ -0.22
KDM1A-205ENST00000494920 UFL1O94874 794 aa13.7□□□□□ -0.22
KDM1A-205ENST00000494920 PDE8BO95263 885 aa13.7□□□□□ -0.22
KDM1A-205ENST00000494920 LMNB1P20700 586 aa13.7□□□□□ -0.22
KDM1A-205ENST00000494920 IARSP41252 1262 aaKnown RBP13.7□□□□□ -0.22
KDM1A-205ENST00000494920 VPS33BQ9H267 617 aa13.7□□□□□ -0.22
KDM1A-205ENST00000494920 ANKIB1Q9P2G1 1089 aa13.7□□□□□ -0.22
KDM1A-205ENST00000494920 ZNF804BA4D1E1 1349 aa13.69□□□□□ -0.22
KDM1A-205ENST00000494920 HMMRO75330 724 aa13.69□□□□□ -0.22
KDM1A-205ENST00000494920 HDAC1Q13547 482 aaPredicted RBP13.69□□□□□ -0.22
KDM1A-205ENST00000494920 UBE4AQ14139 1066 aa13.69□□□□□ -0.22
KDM1A-205ENST00000494920 METTL24Q5JXM2 366 aa13.69□□□□□ -0.22
KDM1A-205ENST00000494920 TXNRD3Q86VQ6 643 aa13.69□□□□□ -0.22
KDM1A-205ENST00000494920 SUPT20HQ8NEM7 779 aa13.69□□□□□ -0.22
KDM1A-205ENST00000494920 ZC3H4Q9UPT8 1303 aaKnown RBP13.68□□□□□ -0.22
KDM1A-205ENST00000494920 SURF6O75683 361 aaKnown RBP13.68□□□□□ -0.22
KDM1A-205ENST00000494920 AOC3Q16853 763 aa13.68□□□□□ -0.22
KDM1A-205ENST00000494920 C9orf131Q5VYM1 1079 aa13.68□□□□□ -0.22
KDM1A-205ENST00000494920 TMX4Q9H1E5 349 aaPredicted RBP13.68□□□□□ -0.22
KDM1A-205ENST00000494920 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
KDM1A-205ENST00000494920 EXOC6BQ9Y2D4 811 aa13.68□□□□□ -0.22
KDM1A-205ENST00000494920 YDJCA8MPS7 323 aa13.67□□□□□ -0.22
KDM1A-205ENST00000494920 C6orf229H3BNL8 230 aa13.67□□□□□ -0.22
KDM1A-205ENST00000494920 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
KDM1A-205ENST00000494920 TFCP2Q12800 502 aa13.67□□□□□ -0.22
KDM1A-205ENST00000494920 PUM3Q15397 648 aaKnown RBP13.67□□□□□ -0.22
KDM1A-205ENST00000494920 MYH13Q9UKX3 1938 aa13.66□□□□□ -0.22
KDM1A-205ENST00000494920 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
KDM1A-205ENST00000494920 FZD9O00144 591 aa13.66□□□□□ -0.22
KDM1A-205ENST00000494920 ZBTB22O15209 634 aa13.66□□□□□ -0.22
KDM1A-205ENST00000494920 G3BP1Q13283 466 aaKnown RBP eCLIP13.66□□□□□ -0.225e-6■■■□□ 14.7
KDM1A-205ENST00000494920 WASHC4Q2M389 1173 aa13.66□□□□□ -0.22
KDM1A-205ENST00000494920 EYA3Q99504 573 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms