RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 MEIS3Q99687 375 aa21.57■■□□□ 1.04
SNX17-209ENST00000494893 CHMP3Q9Y3E7 222 aa21.57■■□□□ 1.04
SNX17-209ENST00000494893 POTECB2RU33 542 aa21.56■■□□□ 1.04
SNX17-209ENST00000494893 DDNO94850 711 aaPredicted RBP21.56■■□□□ 1.04
SNX17-209ENST00000494893 VPS33BQ9H267 617 aa21.56■■□□□ 1.04
SNX17-209ENST00000494893 IGHMBP2P38935 993 aaKnown RBP21.55■■□□□ 1.04
SNX17-209ENST00000494893 IFIT5Q13325 482 aaKnown RBP21.55■■□□□ 1.04
SNX17-209ENST00000494893 KDM2BQ8NHM5 1336 aa21.55■■□□□ 1.04
SNX17-209ENST00000494893 C6orf229H3BNL8 230 aa21.54■■□□□ 1.04
SNX17-209ENST00000494893 RLBP1P12271 317 aa21.54■■□□□ 1.04
SNX17-209ENST00000494893 TMEM57Q8N5G2 664 aa21.54■■□□□ 1.04
SNX17-209ENST00000494893 JDP2Q8WYK2 163 aa21.54■■□□□ 1.04
SNX17-209ENST00000494893 RRAGCQ9HB90 399 aa21.54■■□□□ 1.04
SNX17-209ENST00000494893 WDR90Q96KV7 1748 aa21.54■■□□□ 1.04
SNX17-209ENST00000494893 XDHP47989 1333 aa21.54■■□□□ 1.04
SNX17-209ENST00000494893 UFL1O94874 794 aa21.53■■□□□ 1.04
SNX17-209ENST00000494893 NIM1KQ8IY84 436 aa21.53■■□□□ 1.04
SNX17-209ENST00000494893 ANKIB1Q9P2G1 1089 aa21.53■■□□□ 1.04
SNX17-209ENST00000494893 GGA1Q9UJY5 639 aa21.53■■□□□ 1.04
SNX17-209ENST00000494893 YDJCA8MPS7 323 aa21.52■■□□□ 1.04
SNX17-209ENST00000494893 RIMBP2O15034 1052 aa21.52■■□□□ 1.04
SNX17-209ENST00000494893 UBTFL1P0CB47 393 aaPredicted RBP21.52■■□□□ 1.04
SNX17-209ENST00000494893 WASHC4Q2M389 1173 aa21.52■■□□□ 1.04
SNX17-209ENST00000494893 CCDC57Q2TAC2 916 aa21.52■■□□□ 1.04
SNX17-209ENST00000494893 DPY19L2Q6NUT2 758 aa21.52■■□□□ 1.04
SNX17-209ENST00000494893 MPHOSPH8Q99549 860 aa21.52■■□□□ 1.04
SNX17-209ENST00000494893 RFX5P48382 616 aaPredicted RBP21.51■■□□□ 1.03
SNX17-209ENST00000494893 CHRNDQ07001 517 aa21.51■■□□□ 1.03
SNX17-209ENST00000494893 PUS3Q9BZE2 481 aaKnown RBP21.51■■□□□ 1.03
SNX17-209ENST00000494893 RCAN3Q9UKA8 241 aa21.51■■□□□ 1.03
SNX17-209ENST00000494893 LRRFIP2Q9Y608 721 aaKnown RBP21.51■■□□□ 1.03
SNX17-209ENST00000494893 SNAP23O00161 211 aa21.5■■□□□ 1.03
SNX17-209ENST00000494893 ATP2B4P23634 1241 aa21.5■■□□□ 1.03
SNX17-209ENST00000494893 L3MBTL3Q96JM7 780 aaPredicted RBP21.5■■□□□ 1.03
SNX17-209ENST00000494893 ZNRF3Q9ULT6 936 aa21.5■■□□□ 1.03
SNX17-209ENST00000494893 A0A1B0GUL6 1792 aa21.49■■□□□ 1.03
SNX17-209ENST00000494893 CXCL9Q07325 125 aa21.49■■□□□ 1.03
SNX17-209ENST00000494893 DOK7Q18PE1 504 aa21.49■■□□□ 1.03
SNX17-209ENST00000494893 DZIP1LQ8IYY4 767 aaKnown RBP21.49■■□□□ 1.03
SNX17-209ENST00000494893 HELBQ8NG08 1087 aaPredicted RBP21.49■■□□□ 1.03
SNX17-209ENST00000494893 KLHDC4Q8TBB5 520 aa21.49■■□□□ 1.03
SNX17-209ENST00000494893 EYA3Q99504 573 aa21.49■■□□□ 1.03
SNX17-209ENST00000494893 DBNDD1Q9H9R9 158 aa21.49■■□□□ 1.03
SNX17-209ENST00000494893 KLRK1P26718 216 aa21.48■■□□□ 1.03
SNX17-209ENST00000494893 EIF6P56537 245 aaKnown RBP21.48■■□□□ 1.03
SNX17-209ENST00000494893 LDHAL6AQ6ZMR3 332 aa21.48■■□□□ 1.03
SNX17-209ENST00000494893 TXNRD3Q86VQ6 643 aa21.48■■□□□ 1.03
SNX17-209ENST00000494893 KCNQ5Q9NR82 932 aa21.48■■□□□ 1.03
SNX17-209ENST00000494893 IRS2Q9Y4H2 1338 aa21.48■■□□□ 1.03
SNX17-209ENST00000494893 TAF5LO75529 589 aa21.47■■□□□ 1.03
SNX17-209ENST00000494893 TAF7LQ5H9L4 462 aa21.47■■□□□ 1.03
SNX17-209ENST00000494893 GPC2Q8N158 579 aa21.47■■□□□ 1.03
SNX17-209ENST00000494893 PANK1Q8TE04 598 aa21.47■■□□□ 1.03
SNX17-209ENST00000494893 ZC3H12CQ9C0D7 883 aaKnown RBP21.47■■□□□ 1.03
SNX17-209ENST00000494893 ANKRD2Q9GZV1 360 aa21.47■■□□□ 1.03
SNX17-209ENST00000494893 RIPOR2Q9Y4F9 1068 aa21.47■■□□□ 1.03
SNX17-209ENST00000494893 MED23Q9ULK4 1368 aa21.47■■□□□ 1.03
SNX17-209ENST00000494893 PLIN1O60240 522 aa21.46■■□□□ 1.03
SNX17-209ENST00000494893 ECE2O60344 883 aa21.46■■□□□ 1.03
SNX17-209ENST00000494893 RAD17O75943 681 aa21.46■■□□□ 1.03
SNX17-209ENST00000494893 GNAI3P08754 354 aa21.46■■□□□ 1.03
SNX17-209ENST00000494893 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
SNX17-209ENST00000494893 LRRC24Q50LG9 513 aa21.46■■□□□ 1.03
SNX17-209ENST00000494893 LEMD3Q9Y2U8 911 aa21.46■■□□□ 1.03
SNX17-209ENST00000494893 GJA3Q9Y6H8 435 aa21.46■■□□□ 1.03
SNX17-209ENST00000494893 ZNF804BA4D1E1 1349 aa21.46■■□□□ 1.03
SNX17-209ENST00000494893 PTPN12Q05209 780 aaKnown RBP21.45■■□□□ 1.02
SNX17-209ENST00000494893 CNNM1Q9NRU3 951 aa21.45■■□□□ 1.02
SNX17-209ENST00000494893 SCNN1DP51172 638 aa21.44■■□□□ 1.02
SNX17-209ENST00000494893 FTSJ3Q8IY81 847 aaKnown RBP21.44■■□□□ 1.02
SNX17-209ENST00000494893 C1QTNF8P60827 252 aa21.43■■□□□ 1.02
SNX17-209ENST00000494893 CIAPIN1Q6FI81 312 aa21.43■■□□□ 1.02
SNX17-209ENST00000494893 SCN9AQ15858 1988 aa21.43■■□□□ 1.02
SNX17-209ENST00000494893 ZBTB7BO15156 539 aaPredicted RBP21.42■■□□□ 1.02
SNX17-209ENST00000494893 POTEIP0CG38 1075 aa21.42■■□□□ 1.02
SNX17-209ENST00000494893 POTEJP0CG39 1038 aa21.42■■□□□ 1.02
SNX17-209ENST00000494893 MTX1Q13505 466 aa21.42■■□□□ 1.02
SNX17-209ENST00000494893 ITPRIPQ8IWB1 547 aa21.42■■□□□ 1.02
SNX17-209ENST00000494893 VGLL2Q8N8G2 317 aa21.42■■□□□ 1.02
SNX17-209ENST00000494893 TAF1DQ9H5J8 278 aaPredicted RBP21.42■■□□□ 1.02
SNX17-209ENST00000494893 PSMD14O00487 310 aa21.41■■□□□ 1.02
SNX17-209ENST00000494893 TOMM70O94826 608 aa21.41■■□□□ 1.02
SNX17-209ENST00000494893 ATG9AQ7Z3C6 839 aa21.41■■□□□ 1.02
SNX17-209ENST00000494893 PA2G4Q9UQ80 394 aaKnown RBP21.41■■□□□ 1.02
SNX17-209ENST00000494893 GNAI2P04899 355 aa21.4■■□□□ 1.02
SNX17-209ENST00000494893 GMPSP49915 693 aaPredicted RBP21.4■■□□□ 1.02
SNX17-209ENST00000494893 C20orf194Q5TEA3 1177 aa21.4■■□□□ 1.02
SNX17-209ENST00000494893 C15orf52Q6ZUT6 534 aaKnown RBP21.4■■□□□ 1.02
SNX17-209ENST00000494893 HACL1Q9UJ83 578 aa21.4■■□□□ 1.02
SNX17-209ENST00000494893 HDAC5Q9UQL6 1122 aa21.4■■□□□ 1.02
SNX17-209ENST00000494893 SCN4AP35499 1836 aa21.39■■□□□ 1.02
SNX17-209ENST00000494893 MROH5Q6ZUA9 1318 aa21.39■■□□□ 1.01
SNX17-209ENST00000494893 EYA2O00167 538 aa21.39■■□□□ 1.01
SNX17-209ENST00000494893 EPS15P42566 896 aa21.39■■□□□ 1.01
SNX17-209ENST00000494893 TNIP1Q15025 636 aa21.39■■□□□ 1.01
SNX17-209ENST00000494893 RBM46Q8TBY0 533 aaKnown RBP21.39■■□□□ 1.01
SNX17-209ENST00000494893 C1orf115Q9H7X2 142 aa21.39■■□□□ 1.01
SNX17-209ENST00000494893 ZBTB12Q9Y330 459 aaPredicted RBP21.39■■□□□ 1.01
SNX17-209ENST00000494893 PNMA6EA0A0J9YXQ4 647 aa21.38■■□□□ 1.01
SNX17-209ENST00000494893 SHTN1A0MZ66 631 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms