RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ANKRD18BA2A2Z9 1011 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 RIMBP2O15034 1052 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 EPHX2P34913 555 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 FAM161AQ3B820 660 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 CIAPIN1Q6FI81 312 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 CHMP3Q9Y3E7 222 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 MYH3P11055 1940 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 SCN4AP35499 1836 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 DUOX1Q9NRD9 1551 aa22.29■■□□□ 1.16
HDAC4-211ENST00000494800 COL4A1P02462 1669 aa22.28■■□□□ 1.16
HDAC4-211ENST00000494800 ATP2B4P23634 1241 aa22.28■■□□□ 1.16
HDAC4-211ENST00000494800 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
HDAC4-211ENST00000494800 EAPPQ56P03 285 aaPredicted RBP22.28■■□□□ 1.16
HDAC4-211ENST00000494800 CHADLQ6NUI6 762 aa22.28■■□□□ 1.16
HDAC4-211ENST00000494800 LDHDQ86WU2 507 aa22.28■■□□□ 1.16
HDAC4-211ENST00000494800 CXCL9Q07325 125 aa22.27■■□□□ 1.16
HDAC4-211ENST00000494800 CCDC57Q2TAC2 916 aa22.26■■□□□ 1.15
HDAC4-211ENST00000494800 ANKRD2Q9GZV1 360 aa22.26■■□□□ 1.15
HDAC4-211ENST00000494800 MINPP1Q9UNW1 487 aa22.26■■□□□ 1.15
HDAC4-211ENST00000494800 CLEC11AQ9Y240 323 aa22.26■■□□□ 1.15
HDAC4-211ENST00000494800 RAD17O75943 681 aa22.25■■□□□ 1.15
HDAC4-211ENST00000494800 FOXO4P98177 505 aa22.25■■□□□ 1.15
HDAC4-211ENST00000494800 TAF7LQ5H9L4 462 aa22.25■■□□□ 1.15
HDAC4-211ENST00000494800 LMBR1LQ6UX01 489 aa22.25■■□□□ 1.15
HDAC4-211ENST00000494800 DBNDD1Q9H9R9 158 aa22.25■■□□□ 1.15
HDAC4-211ENST00000494800 ECE2O60344 883 aa22.24■■□□□ 1.15
HDAC4-211ENST00000494800 API5Q9BZZ5 524 aaKnown RBP22.24■■□□□ 1.15
HDAC4-211ENST00000494800 LTBP1Q14766 1721 aa22.23■■□□□ 1.15
HDAC4-211ENST00000494800 SCNN1DP51172 638 aa22.23■■□□□ 1.15
HDAC4-211ENST00000494800 BRPF1P55201 1214 aaPredicted RBP22.23■■□□□ 1.15
HDAC4-211ENST00000494800 DOK7Q18PE1 504 aa22.23■■□□□ 1.15
HDAC4-211ENST00000494800 NOB1Q9ULX3 412 aaKnown RBP22.23■■□□□ 1.15
HDAC4-211ENST00000494800 KIF16BQ96L93 1317 aa22.23■■□□□ 1.15
HDAC4-211ENST00000494800 YDJCA8MPS7 323 aa22.22■■□□□ 1.15
HDAC4-211ENST00000494800 GMPSP49915 693 aaPredicted RBP22.22■■□□□ 1.15
HDAC4-211ENST00000494800 CCT4P50991 539 aaKnown RBP22.22■■□□□ 1.15
HDAC4-211ENST00000494800 RARSP54136 660 aaKnown RBP22.22■■□□□ 1.15
HDAC4-211ENST00000494800 GPR101Q96P66 508 aaPredicted RBP22.22■■□□□ 1.15
HDAC4-211ENST00000494800 GPRC5DQ9NZD1 345 aa22.22■■□□□ 1.15
HDAC4-211ENST00000494800 LEMD3Q9Y2U8 911 aa22.22■■□□□ 1.15
HDAC4-211ENST00000494800 UTYO14607 1347 aa22.22■■□□□ 1.15
HDAC4-211ENST00000494800 NBPF7P0C2Y1 421 aaPredicted RBP22.21■■□□□ 1.15
HDAC4-211ENST00000494800 POTEIP0CG38 1075 aa22.21■■□□□ 1.15
HDAC4-211ENST00000494800 POTEJP0CG39 1038 aa22.21■■□□□ 1.15
HDAC4-211ENST00000494800 KCNJ4P48050 445 aa22.21■■□□□ 1.15
HDAC4-211ENST00000494800 USP50Q70EL3 339 aaPredicted RBP22.21■■□□□ 1.15
HDAC4-211ENST00000494800 ADARB2Q9NS39 739 aaKnown RBP22.21■■□□□ 1.15
HDAC4-211ENST00000494800 EPS15P42566 896 aa22.2■■□□□ 1.14
HDAC4-211ENST00000494800 SUCLG2Q96I99 432 aa22.2■■□□□ 1.14
HDAC4-211ENST00000494800 MED23Q9ULK4 1368 aa22.2■■□□□ 1.14
HDAC4-211ENST00000494800 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
HDAC4-211ENST00000494800 RPS12P25398 132 aaKnown RBP22.19■■□□□ 1.14
HDAC4-211ENST00000494800 EPHA10Q5JZY3 1008 aa22.19■■□□□ 1.14
HDAC4-211ENST00000494800 ZNF804BA4D1E1 1349 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 H7C1D1 291 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 PSMD14O00487 310 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 CHRNDQ07001 517 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 LDHAL6AQ6ZMR3 332 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 PODNQ7Z5L7 613 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 ARHGAP45Q92619 1136 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 CNNM1Q9NRU3 951 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 HDAC5Q9UQL6 1122 aa22.18■■□□□ 1.14
HDAC4-211ENST00000494800 DPF2Q92785 391 aa22.17■■□□□ 1.14
HDAC4-211ENST00000494800 SPEF2Q9C093 1822 aa22.17■■□□□ 1.14
HDAC4-211ENST00000494800 USP44Q9H0E7 712 aa22.16■■□□□ 1.14
HDAC4-211ENST00000494800 BICC1Q9H694 974 aaKnown RBP22.16■■□□□ 1.14
HDAC4-211ENST00000494800 CNOT7Q9UIV1 285 aaKnown RBP22.16■■□□□ 1.14
HDAC4-211ENST00000494800 CNTROBQ8N137 903 aa22.15■■□□□ 1.14
HDAC4-211ENST00000494800 COA1Q9GZY4 146 aa22.15■■□□□ 1.14
HDAC4-211ENST00000494800 ZBTB12Q9Y330 459 aaPredicted RBP22.15■■□□□ 1.14
HDAC4-211ENST00000494800 RABL6Q3YEC7 729 aaPredicted RBP22.14■■□□□ 1.13
HDAC4-211ENST00000494800 MAP1SQ66K74 1059 aaPredicted RBP22.14■■□□□ 1.13
HDAC4-211ENST00000494800 MICALL2Q8IY33 904 aa22.14■■□□□ 1.13
HDAC4-211ENST00000494800 KAZALD1Q96I82 304 aa22.14■■□□□ 1.13
HDAC4-211ENST00000494800 ZNF594Q96JF6 807 aaPredicted RBP22.14■■□□□ 1.13
HDAC4-211ENST00000494800 USP17L3A6NCW0 530 aa22.13■■□□□ 1.13
HDAC4-211ENST00000494800 USP17L4A6NCW7 530 aa22.13■■□□□ 1.13
HDAC4-211ENST00000494800 VIL1P09327 827 aaKnown RBP22.13■■□□□ 1.13
HDAC4-211ENST00000494800 UBTFL1P0CB47 393 aaPredicted RBP22.13■■□□□ 1.13
HDAC4-211ENST00000494800 USP17L1Q7RTZ2 530 aa22.13■■□□□ 1.13
HDAC4-211ENST00000494800 FRAT1Q92837 279 aaPredicted RBP22.13■■□□□ 1.13
HDAC4-211ENST00000494800 KCNQ5Q9NR82 932 aa22.13■■□□□ 1.13
HDAC4-211ENST00000494800 ADAMTSL1Q8N6G6 1762 aa22.12■■□□□ 1.13
HDAC4-211ENST00000494800 WTIPA6NIX2 430 aaPredicted RBP22.11■■□□□ 1.13
HDAC4-211ENST00000494800 TAF5LO75529 589 aa22.11■■□□□ 1.13
HDAC4-211ENST00000494800 RSBN1LQ6PCB5 846 aaPredicted RBP22.11■■□□□ 1.13
HDAC4-211ENST00000494800 AGBL3Q8NEM8 1001 aa22.11■■□□□ 1.13
HDAC4-211ENST00000494800 HELBQ8NG08 1087 aaPredicted RBP22.11■■□□□ 1.13
HDAC4-211ENST00000494800 ZC3H15Q8WU90 426 aaKnown RBP22.11■■□□□ 1.13
HDAC4-211ENST00000494800 CREBZFQ9NS37 354 aa22.11■■□□□ 1.13
HDAC4-211ENST00000494800 CEP350Q5VT06 3117 aa22.11■■□□□ 1.13
HDAC4-211ENST00000494800 MROH5Q6ZUA9 1318 aa22.1■■□□□ 1.13
HDAC4-211ENST00000494800 PASKQ96RG2 1323 aa22.1■■□□□ 1.13
HDAC4-211ENST00000494800 PLIN1O60240 522 aa22.1■■□□□ 1.13
HDAC4-211ENST00000494800 ITGBL1O95965 494 aaPredicted RBP22.1■■□□□ 1.13
HDAC4-211ENST00000494800 HTRA3P83110 453 aa22.1■■□□□ 1.13
HDAC4-211ENST00000494800 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
HDAC4-211ENST00000494800 ANKRD44Q8N8A2 993 aa22.1■■□□□ 1.13
HDAC4-211ENST00000494800 FBXW7Q969H0 707 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms