RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CNNM1Q9NRU3 951 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 POLLQ9UGP5 575 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 SUPT16HQ9Y5B9 1047 aaKnown RBP13.92□□□□□ -0.18
APTX-230ENST00000494649 RTL9Q8NET4 1388 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 GNAI2P04899 355 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 LRRC24Q50LG9 513 aa13.92□□□□□ -0.18
APTX-230ENST00000494649 BSDC1Q9NW68 430 aaPredicted RBP13.92□□□□□ -0.18
APTX-230ENST00000494649 PA2G4Q9UQ80 394 aaKnown RBP13.92□□□□□ -0.18
APTX-230ENST00000494649 CCDC88AQ3V6T2 1871 aa13.91□□□□□ -0.18
APTX-230ENST00000494649 SRGAP3O43295 1099 aa13.91□□□□□ -0.18
APTX-230ENST00000494649 UFL1O94874 794 aa13.91□□□□□ -0.18
APTX-230ENST00000494649 CHD4Q14839 1912 aa13.91□□□□□ -0.18
APTX-230ENST00000494649 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
APTX-230ENST00000494649 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
APTX-230ENST00000494649 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
APTX-230ENST00000494649 CHRNDQ07001 517 aa13.91□□□□□ -0.18
APTX-230ENST00000494649 CC2D2BQ6DHV5 1058 aa13.91□□□□□ -0.18
APTX-230ENST00000494649 SBF1O95248 1867 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 MS4A1P11836 297 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 IRX6P78412 446 aaPredicted RBP13.9□□□□□ -0.18
APTX-230ENST00000494649 TMC4Q7Z404 712 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 LARGE2Q8N3Y3 721 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 TBC1D16Q8TBP0 767 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 PSMD1Q99460 953 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 DUOX1Q9NRD9 1551 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 LRRC37AA6NMS7 1700 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 COL4A5P29400 1685 aa13.9□□□□□ -0.18
APTX-230ENST00000494649 KLRK1P26718 216 aa13.89□□□□□ -0.19
APTX-230ENST00000494649 RFX5P48382 616 aaPredicted RBP13.89□□□□□ -0.19
APTX-230ENST00000494649 PDE3AQ14432 1141 aa13.89□□□□□ -0.19
APTX-230ENST00000494649 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
APTX-230ENST00000494649 GGA1Q9UJY5 639 aa13.89□□□□□ -0.19
APTX-230ENST00000494649 DDX19BQ9UMR2 479 aa13.89□□□□□ -0.19
APTX-230ENST00000494649 XDHP47989 1333 aa13.88□□□□□ -0.19
APTX-230ENST00000494649 LTBP3Q9NS15 1303 aa13.88□□□□□ -0.19
APTX-230ENST00000494649 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
APTX-230ENST00000494649 WASHC4Q2M389 1173 aa13.88□□□□□ -0.19
APTX-230ENST00000494649 DBNDD1Q9H9R9 158 aa13.88□□□□□ -0.19
APTX-230ENST00000494649 KCNJ4P48050 445 aa13.87□□□□□ -0.19
APTX-230ENST00000494649 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
APTX-230ENST00000494649 CRBNQ96SW2 442 aa13.87□□□□□ -0.19
APTX-230ENST00000494649 BCL11AQ9H165 835 aa13.87□□□□□ -0.19
APTX-230ENST00000494649 TXNRD3Q86VQ6 643 aa13.87□□□□□ -0.19
APTX-230ENST00000494649 JDP2Q8WYK2 163 aa13.87□□□□□ -0.19
APTX-230ENST00000494649 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
APTX-230ENST00000494649 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 RTFDC1Q9BY42 306 aaPredicted RBP13.86□□□□□ -0.19
APTX-230ENST00000494649 TIAM2Q8IVF5 1701 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 ZNF541Q9H0D2 1346 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 LTBP1Q14766 1721 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 SUPT20HQ8NEM7 779 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 KCNQ5Q9NR82 932 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 ZBTB40Q9NUA8 1239 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 RIPOR2Q9Y4F9 1068 aa13.86□□□□□ -0.19
APTX-230ENST00000494649 ZNF804BA4D1E1 1349 aa13.85□□□□□ -0.19
APTX-230ENST00000494649 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
APTX-230ENST00000494649 GRIPAP1Q4V328 841 aa13.85□□□□□ -0.19
APTX-230ENST00000494649 CEP85Q6P2H3 762 aa13.85□□□□□ -0.19
APTX-230ENST00000494649 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
APTX-230ENST00000494649 ZC3H12CQ9C0D7 883 aaKnown RBP13.85□□□□□ -0.19
APTX-230ENST00000494649 G3V3G9 751 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 EYA2O00167 538 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 DDNO94850 711 aaPredicted RBP13.84□□□□□ -0.19
APTX-230ENST00000494649 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 DCAF8Q5TAQ9 597 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 ATG9AQ7Z3C6 839 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 ANKRD2Q9GZV1 360 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 GJA3Q9Y6H8 435 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 RAD17O75943 681 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 MTX1Q13505 466 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 EYA3Q99504 573 aa13.84□□□□□ -0.19
APTX-230ENST00000494649 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.84□□□□□ -0.19
APTX-230ENST00000494649 YDJCA8MPS7 323 aa13.83□□□□□ -0.2
APTX-230ENST00000494649 APBB1O00213 710 aa13.83□□□□□ -0.2
APTX-230ENST00000494649 ECE2O60344 883 aa13.83□□□□□ -0.2
APTX-230ENST00000494649 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
APTX-230ENST00000494649 JAG2Q9Y219 1238 aa13.83□□□□□ -0.2
APTX-230ENST00000494649 MROH5Q6ZUA9 1318 aa13.82□□□□□ -0.2
APTX-230ENST00000494649 SURF6O75683 361 aaKnown RBP13.82□□□□□ -0.2
APTX-230ENST00000494649 OS9Q13438 667 aaPredicted RBP13.82□□□□□ -0.2
APTX-230ENST00000494649 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
APTX-230ENST00000494649 NMRK2Q9NPI5 230 aa13.82□□□□□ -0.2
APTX-230ENST00000494649 COPRSQ9NQ92 184 aa13.82□□□□□ -0.2
APTX-230ENST00000494649 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
APTX-230ENST00000494649 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 FZD9O00144 591 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 PDE8BO95263 885 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 GYG1P46976 350 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 GPBP1L1Q9HC44 474 aaPredicted RBP13.81□□□□□ -0.2
APTX-230ENST00000494649 ZNRF3Q9ULT6 936 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 IQSEC3Q9UPP2 1182 aaPredicted RBP13.81□□□□□ -0.2
APTX-230ENST00000494649 EXOC6BQ9Y2D4 811 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 DICER1Q9UPY3 1922 aaKnown RBP13.81□□□□□ -0.2
APTX-230ENST00000494649 EIF6P56537 245 aaKnown RBP13.81□□□□□ -0.2
APTX-230ENST00000494649 TFCP2Q12800 502 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 POLA2Q14181 598 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms