RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 CA12O43570 354 aa15.25■□□□□ 0.03
CSNK1E-212ENST00000494610 NOGQ13253 232 aa15.25■□□□□ 0.03
CSNK1E-212ENST00000494610 RGMBQ6NW40 437 aa15.25■□□□□ 0.03
CSNK1E-212ENST00000494610 ISCA1Q9BUE6 129 aa15.25■□□□□ 0.03
CSNK1E-212ENST00000494610 GBA2Q9HCG7 927 aaPredicted RBP15.25■□□□□ 0.03
CSNK1E-212ENST00000494610 SEC31BQ9NQW1 1179 aa15.25■□□□□ 0.03
CSNK1E-212ENST00000494610 WTIPA6NIX2 430 aaPredicted RBP15.24■□□□□ 0.03
CSNK1E-212ENST00000494610 TRPA1O75762 1119 aa15.24■□□□□ 0.03
CSNK1E-212ENST00000494610 ZNF157P51786 506 aaPredicted RBP15.24■□□□□ 0.03
CSNK1E-212ENST00000494610 TBC1D16Q8TBP0 767 aa15.24■□□□□ 0.03
CSNK1E-212ENST00000494610 DPF2Q92785 391 aa15.24■□□□□ 0.03
CSNK1E-212ENST00000494610 CCDC85AQ96PX6 553 aaPredicted RBP15.24■□□□□ 0.03
CSNK1E-212ENST00000494610 RNF186Q9NXI6 227 aa15.24■□□□□ 0.03
CSNK1E-212ENST00000494610 TRIM35Q9UPQ4 493 aa15.24■□□□□ 0.03
CSNK1E-212ENST00000494610 CHL1O00533 1208 aa15.23■□□□□ 0.03
CSNK1E-212ENST00000494610 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
CSNK1E-212ENST00000494610 HDGFL1Q5TGJ6 251 aa15.23■□□□□ 0.03
CSNK1E-212ENST00000494610 ANKRD13DQ6ZTN6 518 aa15.23■□□□□ 0.03
CSNK1E-212ENST00000494610 MOB2Q70IA6 237 aa15.23■□□□□ 0.03
CSNK1E-212ENST00000494610 PLBD2Q8NHP8 589 aa15.23■□□□□ 0.03
CSNK1E-212ENST00000494610 GGA3Q9NZ52 723 aa15.23■□□□□ 0.03
CSNK1E-212ENST00000494610 IRS4O14654 1257 aaPredicted RBP15.22■□□□□ 0.03
CSNK1E-212ENST00000494610 KIF4BQ2VIQ3 1234 aa15.22■□□□□ 0.03
CSNK1E-212ENST00000494610 C2orf69Q8N8R5 385 aa15.22■□□□□ 0.03
CSNK1E-212ENST00000494610 DCPSQ96C86 337 aaKnown RBP15.22■□□□□ 0.03
CSNK1E-212ENST00000494610 CSRNP1Q96S65 589 aa15.22■□□□□ 0.03
CSNK1E-212ENST00000494610 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
CSNK1E-212ENST00000494610 CCDC184Q52MB2 194 aa15.21■□□□□ 0.03
CSNK1E-212ENST00000494610 PRAMEF18Q5VWM3 479 aa15.21■□□□□ 0.03
CSNK1E-212ENST00000494610 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.03
CSNK1E-212ENST00000494610 CDCA5Q96FF9 252 aa15.21■□□□□ 0.03
CSNK1E-212ENST00000494610 BABAM1Q9NWV8 329 aa15.21■□□□□ 0.03
CSNK1E-212ENST00000494610 RPS8P62241 208 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-212ENST00000494610 ANGEL2Q5VTE6 544 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-212ENST00000494610 PHAXQ9H814 394 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-212ENST00000494610 CENPFP49454 3210 aa15.2■□□□□ 0.02
CSNK1E-212ENST00000494610 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-212ENST00000494610 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
CSNK1E-212ENST00000494610 UFL1O94874 794 aa15.19■□□□□ 0.02
CSNK1E-212ENST00000494610 SLC10A3P09131 477 aa15.19■□□□□ 0.02
CSNK1E-212ENST00000494610 VIL1P09327 827 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-212ENST00000494610 SCARF1Q14162 830 aa15.19■□□□□ 0.02
CSNK1E-212ENST00000494610 TMC4Q7Z404 712 aa15.19■□□□□ 0.02
CSNK1E-212ENST00000494610 MXD3Q9BW11 206 aa15.19■□□□□ 0.02
CSNK1E-212ENST00000494610 ELL2O00472 640 aaPredicted RBP15.18■□□□□ 0.02
CSNK1E-212ENST00000494610 RPS12P25398 132 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-212ENST00000494610 DUSP27Q5VZP5 1158 aa15.18■□□□□ 0.02
CSNK1E-212ENST00000494610 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
CSNK1E-212ENST00000494610 ZC3H12CQ9C0D7 883 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-212ENST00000494610 HTTP42858 3142 aa15.18■□□□□ 0.02
CSNK1E-212ENST00000494610 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
CSNK1E-212ENST00000494610 RASAL3Q86YV0 1011 aa15.17■□□□□ 0.02
CSNK1E-212ENST00000494610 SULF1Q8IWU6 871 aa15.17■□□□□ 0.02
CSNK1E-212ENST00000494610 EYA3Q99504 573 aa15.17■□□□□ 0.02
CSNK1E-212ENST00000494610 MYD88Q99836 296 aa15.17■□□□□ 0.02
CSNK1E-212ENST00000494610 ANKIB1Q9P2G1 1089 aa15.17■□□□□ 0.02
CSNK1E-212ENST00000494610 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
CSNK1E-212ENST00000494610 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
CSNK1E-212ENST00000494610 SAGE1Q9NXZ1 904 aa15.16■□□□□ 0.02
CSNK1E-212ENST00000494610 G3V3G9 751 aa15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 TBC1D8O95759 1140 aa15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 ZNF280AP59817 542 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 MKRN3Q13064 507 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 DCAF8Q5TAQ9 597 aa15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 RSBN1LQ6PCB5 846 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 PODXL2Q9NZ53 605 aa15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 ADAMTS8Q9UP79 889 aa15.15■□□□□ 0.02
CSNK1E-212ENST00000494610 NBPF9Q3BBW0 867 aa15.14■□□□□ 0.01
CSNK1E-212ENST00000494610 ZBTB38Q8NAP3 1195 aaPredicted RBP15.14■□□□□ 0.01
CSNK1E-212ENST00000494610 RUNDC1Q96C34 613 aa15.14■□□□□ 0.01
CSNK1E-212ENST00000494610 GMLQ99445 158 aa15.14■□□□□ 0.01
CSNK1E-212ENST00000494610 MYOZ2Q9NPC6 264 aa15.14■□□□□ 0.01
CSNK1E-212ENST00000494610 HYPKQ9NX55 129 aa15.14■□□□□ 0.01
CSNK1E-212ENST00000494610 BRCA2P51587 3418 aa15.14■□□□□ 0.01
CSNK1E-212ENST00000494610 PSME4Q14997 1843 aa15.13■□□□□ 0.01
CSNK1E-212ENST00000494610 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
CSNK1E-212ENST00000494610 TRIM28Q13263 835 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-212ENST00000494610 CTU1Q7Z7A3 348 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-212ENST00000494610 YTHDC1Q96MU7 727 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-212ENST00000494610 FZD1Q9UP38 647 aa15.13■□□□□ 0.01
CSNK1E-212ENST00000494610 USP17L8P0C7I0 530 aa15.12■□□□□ 0.01
CSNK1E-212ENST00000494610 HNRNPUQ00839 825 aaKnown RBP eCLIP15.12■□□□□ 0.01
CSNK1E-212ENST00000494610 R3HDMLQ9H3Y0 253 aa15.12■□□□□ 0.01
CSNK1E-212ENST00000494610 HPS5Q9UPZ3 1129 aa15.12■□□□□ 0.01
CSNK1E-212ENST00000494610 ZNF646O15015 1829 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-212ENST00000494610 CENPBP07199 599 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-212ENST00000494610 PRKG1Q13976 671 aa15.11■□□□□ 0.01
CSNK1E-212ENST00000494610 C8orf58Q8NAV2 365 aa15.11■□□□□ 0.01
CSNK1E-212ENST00000494610 AGBL3Q8NEM8 1001 aa15.11■□□□□ 0.01
CSNK1E-212ENST00000494610 ZNF296Q8WUU4 475 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-212ENST00000494610 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-212ENST00000494610 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
CSNK1E-212ENST00000494610 HOXB7P09629 217 aa15.1■□□□□ 0.01
CSNK1E-212ENST00000494610 ZNF853P0CG23 659 aa15.1■□□□□ 0.01
CSNK1E-212ENST00000494610 GOLGA2Q08379 1002 aa15.1■□□□□ 0.01
CSNK1E-212ENST00000494610 TXNRD3Q86VQ6 643 aa15.1■□□□□ 0.01
CSNK1E-212ENST00000494610 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms