RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 ATG3Q9NT62 314 aa7.77□□□□□ -1.17
NXF3-206ENST00000494300 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.17
NXF3-206ENST00000494300 BTAF1O14981 1849 aa7.77□□□□□ -1.17
NXF3-206ENST00000494300 SBF2Q86WG5 1849 aa7.77□□□□□ -1.17
NXF3-206ENST00000494300 DCTN1Q14203 1278 aa7.76□□□□□ -1.17
NXF3-206ENST00000494300 HIC1Q14526 733 aa7.76□□□□□ -1.17
NXF3-206ENST00000494300 R3HDM1Q15032 1099 aaKnown RBP7.76□□□□□ -1.17
NXF3-206ENST00000494300 CCDC184Q52MB2 194 aa7.76□□□□□ -1.17
NXF3-206ENST00000494300 SPTY2D1Q68D10 685 aaPredicted RBP7.76□□□□□ -1.17
NXF3-206ENST00000494300 NUDT18Q6ZVK8 323 aa7.76□□□□□ -1.17
NXF3-206ENST00000494300 IL17REQ8NFR9 667 aa7.76□□□□□ -1.17
NXF3-206ENST00000494300 FMNL2Q96PY5 1086 aa7.76□□□□□ -1.17
NXF3-206ENST00000494300 TEX13AQ9BXU3 409 aaPredicted RBP7.76□□□□□ -1.17
NXF3-206ENST00000494300 LAS1LQ9Y4W2 734 aaKnown RBP7.76□□□□□ -1.17
NXF3-206ENST00000494300 RGPD3A6NKT7 1758 aaPredicted RBP7.76□□□□□ -1.17
NXF3-206ENST00000494300 RGPD4Q7Z3J3 1758 aa7.76□□□□□ -1.17
NXF3-206ENST00000494300 CEMIPQ8WUJ3 1361 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 STARD3NLO95772 234 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 ABL2P42684 1182 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 KCNQ4P56696 695 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 SLC39A6Q13433 755 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 SLC15A2Q16348 729 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 TMEM259Q4ZIN3 620 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 EGFLAMQ63HQ2 1017 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 PHLDB3Q6NSJ2 640 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 ZNF790Q6PG37 636 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 ANKK1Q8NFD2 765 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 FLAD1Q8NFF5 587 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 ZFRQ96KR1 1074 aaKnown RBP7.75□□□□□ -1.17
NXF3-206ENST00000494300 KLHL42Q9P2K6 505 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 TSPYL4Q9UJ04 414 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 TOGARAM1Q9Y4F4 1720 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 MRC1P22897 1456 aa7.75□□□□□ -1.17
NXF3-206ENST00000494300 TLDC2A0PJX2 215 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 MAP4K4O95819 1239 aaPredicted RBP7.74□□□□□ -1.17
NXF3-206ENST00000494300 PPP2R2DQ66LE6 453 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 TTC13Q8NBP0 860 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 THUMPD2Q9BTF0 503 aaKnown RBP7.74□□□□□ -1.17
NXF3-206ENST00000494300 LNPKQ9C0E8 428 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 LRRC4BQ9NT99 713 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 BABAM1Q9NWV8 329 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.74□□□□□ -1.17
NXF3-206ENST00000494300 TBC1D2BQ9UPU7 963 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 SCN11AQ9UI33 1791 aa7.74□□□□□ -1.17
NXF3-206ENST00000494300 ITGB4P16144 1822 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 C3orf80F5H4A9 247 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 PARNO95453 639 aaKnown RBP7.73□□□□□ -1.17
NXF3-206ENST00000494300 SNRPA1P09661 255 aaKnown RBP7.73□□□□□ -1.17
NXF3-206ENST00000494300 PTPN5P54829 565 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 GNAI1P63096 354 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 MYSM1Q5VVJ2 828 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 B4GALNT3Q6L9W6 998 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 MORC4Q8TE76 937 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 NAP1L5Q96NT1 182 aaPredicted RBP7.73□□□□□ -1.17
NXF3-206ENST00000494300 HCSTQ9UBK5 93 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 RTCBQ9Y3I0 505 aaKnown RBP7.73□□□□□ -1.17
NXF3-206ENST00000494300 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
NXF3-206ENST00000494300 RREB1Q92766 1687 aa7.73□□□□□ -1.17
NXF3-206ENST00000494300 ITPK1Q13572 414 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 THSD4Q6ZMP0 1018 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 APBB1IPQ7Z5R6 666 aaPredicted RBP7.72□□□□□ -1.17
NXF3-206ENST00000494300 SMC5Q8IY18 1101 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 TMTC2Q8N394 836 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 NME8Q8N427 588 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 LINC00116Q8NCU8 138 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 ZNF496Q96IT1 587 aaPredicted RBP7.72□□□□□ -1.17
NXF3-206ENST00000494300 CCDC87Q9NVE4 849 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
NXF3-206ENST00000494300 MIS18AQ9NYP9 233 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 MAGEC2Q9UBF1 373 aaPredicted RBP7.72□□□□□ -1.17
NXF3-206ENST00000494300 TMA7Q9Y2S6 64 aaKnown RBP7.72□□□□□ -1.17
NXF3-206ENST00000494300 CNTNAP4Q9C0A0 1308 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 NUP188Q5SRE5 1749 aa7.72□□□□□ -1.17
NXF3-206ENST00000494300 HEG1Q9ULI3 1381 aa7.71□□□□□ -1.17
NXF3-206ENST00000494300 A0A087WZG4 1122 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 SENP3-EIF4A1A0A087X0R7 540 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
NXF3-206ENST00000494300 SSFA2P28290 1259 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 POLD1P28340 1107 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 RFC4P35249 363 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 CRKLP46109 303 aaKnown RBP7.71□□□□□ -1.18
NXF3-206ENST00000494300 BCAMP50895 628 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 ZNF827Q17R98 1081 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 FAM161AQ3B820 660 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 TRAPPC3LQ5T215 181 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 RC3H1Q5TC82 1133 aaKnown RBP7.71□□□□□ -1.18
NXF3-206ENST00000494300 DNAJC10Q8IXB1 793 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 VTI1AQ96AJ9 217 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 BEGAINQ9BUH8 593 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 SPON1Q9HCB6 807 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 IFT57Q9NWB7 429 aa7.71□□□□□ -1.18
NXF3-206ENST00000494300 ADAMTS7Q9UKP4 1686 aa7.7□□□□□ -1.18
NXF3-206ENST00000494300 LY75O60449 1722 aa7.7□□□□□ -1.18
NXF3-206ENST00000494300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.7□□□□□ -1.18
NXF3-206ENST00000494300 ZPR1O75312 459 aa7.7□□□□□ -1.18
NXF3-206ENST00000494300 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
NXF3-206ENST00000494300 CLK2P49760 499 aaKnown RBP7.7□□□□□ -1.18
NXF3-206ENST00000494300 SLC16A10Q8TF71 515 aa7.7□□□□□ -1.18
NXF3-206ENST00000494300 KCNB2Q92953 911 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms