RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
RN7SL538P-201ENST00000494227 NARFQ9UHQ1 456 aa11.15□□□□□ -0.62
RN7SL538P-201ENST00000494227 HDAC5Q9UQL6 1122 aa11.15□□□□□ -0.62
RN7SL538P-201ENST00000494227 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.62
RN7SL538P-201ENST00000494227 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 GLTPD2A6NH11 291 aa11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 FAM177BA6PVY3 158 aa11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 LMNB1P20700 586 aa11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 ZBTB38Q8NAP3 1195 aaPredicted RBP11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 BCL11AQ9H165 835 aa11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 MKRN1Q9UHC7 482 aaKnown RBP11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 TRMT112Q9UI30 125 aaKnown RBP11.14□□□□□ -0.63
RN7SL538P-201ENST00000494227 TBC1D9BQ66K14 1250 aa11.13□□□□□ -0.63
RN7SL538P-201ENST00000494227 CLEC4GQ6UXB4 293 aa11.13□□□□□ -0.63
RN7SL538P-201ENST00000494227 PLA2G12BQ9BX93 195 aa11.13□□□□□ -0.63
RN7SL538P-201ENST00000494227 NIP7Q9Y221 180 aaKnown RBP eCLIP11.13□□□□□ -0.63
RN7SL538P-201ENST00000494227 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.13□□□□□ -0.63
RN7SL538P-201ENST00000494227 FOXN1O15353 648 aa11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 SASH1O94885 1247 aa11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 CSF1RP07333 972 aa11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 PTPN12Q05209 780 aaKnown RBP11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 BICDL1Q6ZP65 573 aa11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 PLEKHM2Q8IWE5 1019 aa11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 UTP14AQ9BVJ6 771 aaKnown RBP11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 IL1RAPL2Q9NP60 686 aa11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 THSD7BQ9C0I4 1608 aa11.12□□□□□ -0.63
RN7SL538P-201ENST00000494227 CDHR2Q9BYE9 1310 aa11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 IRS4O14654 1257 aaPredicted RBP11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 RAB11FIP3O75154 756 aa11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 NTSR2O95665 410 aa11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 HCLS1P14317 486 aaPredicted RBP11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 PARP10Q53GL7 1025 aa11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 CHADLQ6NUI6 762 aa11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 C2CD5Q86YS7 1000 aa11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 ZNF594Q96JF6 807 aaPredicted RBP11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 CCDC85AQ96PX6 553 aaPredicted RBP11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 LRRCC1Q9C099 1032 aa11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 COPRSQ9NQ92 184 aa11.11□□□□□ -0.63
RN7SL538P-201ENST00000494227 RGL2O15211 777 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 ZPR1O75312 459 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 SERPINB2P05120 415 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 PUS3Q9BZE2 481 aaKnown RBP11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 SIL1Q9H173 461 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 CHMP3Q9Y3E7 222 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 CNTNAP1P78357 1384 aa11.1□□□□□ -0.63
RN7SL538P-201ENST00000494227 SALL3Q9BXA9 1300 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 LTBP1Q14766 1721 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 SCN4AP35499 1836 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 COL4A5P29400 1685 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 ATG9AQ7Z3C6 839 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 TTLL6Q8N841 843 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 BACH2Q9BYV9 841 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
RN7SL538P-201ENST00000494227 C21orf2O43822 256 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 PDE8AO60658 829 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 OS9Q13438 667 aaPredicted RBP11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 C8orf34Q49A92 452 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 LRRC24Q50LG9 513 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 HSP90AB4PQ58FF6 505 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 TSHZ3Q63HK5 1081 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 KIF1BPQ96EK5 621 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 GREM2Q9H772 168 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 PASKQ96RG2 1323 aa11.08□□□□□ -0.64
RN7SL538P-201ENST00000494227 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 GSPT1P15170 499 aaKnown RBP11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 PDE1AP54750 535 aa11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 CTSWP56202 376 aa11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 TFCP2Q12800 502 aa11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 SLC10A5Q5PT55 438 aa11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 PRR5LQ6MZQ0 368 aa11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 EAF2Q96CJ1 260 aaPredicted RBP11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 STAP2Q9UGK3 403 aa11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 ZNF541Q9H0D2 1346 aa11.07□□□□□ -0.64
RN7SL538P-201ENST00000494227 EYA2O00167 538 aa11.06□□□□□ -0.64
RN7SL538P-201ENST00000494227 OLFM4Q6UX06 510 aa11.06□□□□□ -0.64
RN7SL538P-201ENST00000494227 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
RN7SL538P-201ENST00000494227 OSBPL3Q9H4L5 887 aa11.06□□□□□ -0.64
RN7SL538P-201ENST00000494227 SEC31BQ9NQW1 1179 aa11.06□□□□□ -0.64
RN7SL538P-201ENST00000494227 MKI67P46013 3256 aaKnown RBP11.05□□□□□ -0.64
RN7SL538P-201ENST00000494227 SLC34A2O95436 690 aa11.05□□□□□ -0.64
RN7SL538P-201ENST00000494227 SEC24BO95487 1268 aa11.05□□□□□ -0.64
RN7SL538P-201ENST00000494227 ITGA6P23229 1130 aa11.05□□□□□ -0.64
RN7SL538P-201ENST00000494227 IFIT5Q13325 482 aaKnown RBP11.05□□□□□ -0.64
RN7SL538P-201ENST00000494227 CCDC57Q2TAC2 916 aa11.05□□□□□ -0.64
RN7SL538P-201ENST00000494227 TTC22Q5TAA0 569 aa11.05□□□□□ -0.64
RN7SL538P-201ENST00000494227 ERC1Q8IUD2 1116 aa11.05□□□□□ -0.64
RN7SL538P-201ENST00000494227 ZNF622Q969S3 477 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms