RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PSME4Q14997 1843 aa17.18■□□□□ 0.34
CTDSP1-212ENST00000494067 CNTNAP1P78357 1384 aa17.17■□□□□ 0.34
CTDSP1-212ENST00000494067 HIRAP54198 1017 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-212ENST00000494067 FLIIQ13045 1269 aa17.17■□□□□ 0.34
CTDSP1-212ENST00000494067 TBC1D16Q8TBP0 767 aa17.17■□□□□ 0.34
CTDSP1-212ENST00000494067 TRPM7Q96QT4 1865 aa17.17■□□□□ 0.34
CTDSP1-212ENST00000494067 A0A1B0GUL6 1792 aa17.17■□□□□ 0.34
CTDSP1-212ENST00000494067 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
CTDSP1-212ENST00000494067 TRAF5O00463 557 aa17.16■□□□□ 0.34
CTDSP1-212ENST00000494067 CASP7P55210 303 aa17.16■□□□□ 0.34
CTDSP1-212ENST00000494067 CTSWP56202 376 aa17.16■□□□□ 0.34
CTDSP1-212ENST00000494067 DOK7Q18PE1 504 aa17.16■□□□□ 0.34
CTDSP1-212ENST00000494067 TRPM4Q8TD43 1214 aa17.16■□□□□ 0.34
CTDSP1-212ENST00000494067 ABT1Q9ULW3 272 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-212ENST00000494067 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-212ENST00000494067 H7C1D1 291 aa17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 H7C1W4 665 aa17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 PSMD14O00487 310 aa17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 DEFB115Q30KQ5 88 aa17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 TTLL11Q8NHH1 800 aa17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 ZC3H12CQ9C0D7 883 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 GREM2Q9H772 168 aa17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 PODXL2Q9NZ53 605 aa17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 ANKIB1Q9P2G1 1089 aa17.15■□□□□ 0.34
CTDSP1-212ENST00000494067 F6X3S4 739 aa17.14■□□□□ 0.33
CTDSP1-212ENST00000494067 EGFRP00533 1210 aa17.14■□□□□ 0.33
CTDSP1-212ENST00000494067 UBE3BQ7Z3V4 1068 aa17.14■□□□□ 0.33
CTDSP1-212ENST00000494067 AIDAQ96BJ3 306 aa17.14■□□□□ 0.33
CTDSP1-212ENST00000494067 THSD7BQ9C0I4 1608 aa17.14■□□□□ 0.33
CTDSP1-212ENST00000494067 ECE2O60344 883 aa17.13■□□□□ 0.33
CTDSP1-212ENST00000494067 GCKRQ14397 625 aa17.13■□□□□ 0.33
CTDSP1-212ENST00000494067 COL13A1Q5TAT6 717 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-212ENST00000494067 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
CTDSP1-212ENST00000494067 UFL1O94874 794 aa17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 VEGFBP49765 207 aa17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 CST9Q5W186 159 aa17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 DNAAF4Q8WXU2 420 aa17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 CDC5LQ99459 802 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
CTDSP1-212ENST00000494067 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
CTDSP1-212ENST00000494067 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-212ENST00000494067 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
CTDSP1-212ENST00000494067 TNS4Q8IZW8 715 aa17.11■□□□□ 0.33
CTDSP1-212ENST00000494067 DPF2Q92785 391 aa17.11■□□□□ 0.33
CTDSP1-212ENST00000494067 RPS12P25398 132 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-212ENST00000494067 ECE1P42892 770 aa17.1■□□□□ 0.33
CTDSP1-212ENST00000494067 SAMD7Q7Z3H4 446 aa17.1■□□□□ 0.33
CTDSP1-212ENST00000494067 GLIS2Q9BZE0 524 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-212ENST00000494067 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
CTDSP1-212ENST00000494067 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
CTDSP1-212ENST00000494067 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
CTDSP1-212ENST00000494067 CDC37L1Q7L3B6 337 aa17.09■□□□□ 0.33
CTDSP1-212ENST00000494067 LINS1Q8NG48 757 aa17.09■□□□□ 0.33
CTDSP1-212ENST00000494067 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
CTDSP1-212ENST00000494067 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
CTDSP1-212ENST00000494067 MINPP1Q9UNW1 487 aa17.09■□□□□ 0.33
CTDSP1-212ENST00000494067 POLR2AP24928 1970 aaKnown RBP17.08■□□□□ 0.33
CTDSP1-212ENST00000494067 XDHP47989 1333 aa17.08■□□□□ 0.32
CTDSP1-212ENST00000494067 WDR33Q9C0J8 1336 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-212ENST00000494067 ATP2B4P23634 1241 aa17.08■□□□□ 0.32
CTDSP1-212ENST00000494067 MAP2K1Q02750 393 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-212ENST00000494067 ASTN2O75129 1339 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-212ENST00000494067 CSF1RP07333 972 aa17.07■□□□□ 0.32
CTDSP1-212ENST00000494067 KLRK1P26718 216 aa17.07■□□□□ 0.32
CTDSP1-212ENST00000494067 FOXO4P98177 505 aa17.07■□□□□ 0.32
CTDSP1-212ENST00000494067 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-212ENST00000494067 EPHA10Q5JZY3 1008 aa17.07■□□□□ 0.32
CTDSP1-212ENST00000494067 TXNRD3Q86VQ6 643 aa17.07■□□□□ 0.32
CTDSP1-212ENST00000494067 BSDC1Q9NW68 430 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-212ENST00000494067 CELF2O95319 508 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-212ENST00000494067 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-212ENST00000494067 ITGA6P23229 1130 aa17.06■□□□□ 0.32
CTDSP1-212ENST00000494067 IGHMBP2P38935 993 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-212ENST00000494067 CTCFP49711 727 aaPredicted RBP17.06■□□□□ 0.32
CTDSP1-212ENST00000494067 BEGAINQ9BUH8 593 aa17.06■□□□□ 0.32
CTDSP1-212ENST00000494067 ZNF609O15014 1411 aa17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 SNAP23O00161 211 aa17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 FOXN1O15353 648 aa17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 GRM1Q13255 1194 aa17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 DCPSQ96C86 337 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 TLL2Q9Y6L7 1015 aa17.05■□□□□ 0.32
CTDSP1-212ENST00000494067 MED23Q9ULK4 1368 aa17.04■□□□□ 0.32
CTDSP1-212ENST00000494067 CCT4P50991 539 aaKnown RBP17.04■□□□□ 0.32
CTDSP1-212ENST00000494067 CAPNS2Q96L46 248 aa17.04■□□□□ 0.32
CTDSP1-212ENST00000494067 GMLQ99445 158 aa17.04■□□□□ 0.32
CTDSP1-212ENST00000494067 IRS2Q9Y4H2 1338 aa17.03■□□□□ 0.32
CTDSP1-212ENST00000494067 CYP4F22Q6NT55 531 aa17.03■□□□□ 0.32
CTDSP1-212ENST00000494067 PODNQ7Z5L7 613 aa17.03■□□□□ 0.32
CTDSP1-212ENST00000494067 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
CTDSP1-212ENST00000494067 CDCA7LQ96GN5 454 aa17.03■□□□□ 0.32
CTDSP1-212ENST00000494067 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
CTDSP1-212ENST00000494067 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
CTDSP1-212ENST00000494067 WBP1LQ9NX94 342 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms