RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 KIF16BQ96L93 1317 aa14.75□□□□□ -0.05
UBA3-211ENST00000493957 NBPF7P0C2Y1 421 aaPredicted RBP14.75□□□□□ -0.05
UBA3-211ENST00000493957 LMNB1P20700 586 aa14.75□□□□□ -0.05
UBA3-211ENST00000493957 FOXO4P98177 505 aa14.75□□□□□ -0.05
UBA3-211ENST00000493957 FKBP4Q02790 459 aaKnown RBP eCLIP14.75□□□□□ -0.05
UBA3-211ENST00000493957 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
UBA3-211ENST00000493957 SOGA3Q5TF21 947 aa14.75□□□□□ -0.05
UBA3-211ENST00000493957 ZNF526Q8TF50 670 aaPredicted RBP14.75□□□□□ -0.05
UBA3-211ENST00000493957 FRAT1Q92837 279 aaPredicted RBP14.75□□□□□ -0.05
UBA3-211ENST00000493957 KAZALD1Q96I82 304 aa14.75□□□□□ -0.05
UBA3-211ENST00000493957 SUCLG2Q96I99 432 aa14.75□□□□□ -0.05
UBA3-211ENST00000493957 BBOX1O75936 387 aa14.74□□□□□ -0.05
UBA3-211ENST00000493957 MAMSTRQ6ZN01 415 aa14.74□□□□□ -0.05
UBA3-211ENST00000493957 API5Q9BZZ5 524 aaKnown RBP14.74□□□□□ -0.05
UBA3-211ENST00000493957 C9orf78Q9NZ63 289 aaPredicted RBP14.74□□□□□ -0.05
UBA3-211ENST00000493957 RTL9Q8NET4 1388 aa14.73□□□□□ -0.05
UBA3-211ENST00000493957 UTYO14607 1347 aa14.73□□□□□ -0.05
UBA3-211ENST00000493957 CSF1RP07333 972 aa14.73□□□□□ -0.05
UBA3-211ENST00000493957 TRIM27P14373 513 aa14.73□□□□□ -0.05
UBA3-211ENST00000493957 HSP90B1P14625 803 aaKnown RBP14.73□□□□□ -0.05
UBA3-211ENST00000493957 RPS8P62241 208 aaKnown RBP14.73□□□□□ -0.05
UBA3-211ENST00000493957 SP8Q8IXZ3 490 aa14.73□□□□□ -0.05
UBA3-211ENST00000493957 RTKN2Q8IZC4 609 aa14.73□□□□□ -0.05
UBA3-211ENST00000493957 USP44Q9H0E7 712 aa14.73□□□□□ -0.05
UBA3-211ENST00000493957 SCN9AQ15858 1988 aa14.73□□□□□ -0.05
UBA3-211ENST00000493957 GPSM2P81274 684 aa14.72□□□□□ -0.05
UBA3-211ENST00000493957 CLUAP1Q96AJ1 413 aa14.72□□□□□ -0.05
UBA3-211ENST00000493957 PSMD1Q99460 953 aa14.72□□□□□ -0.05
UBA3-211ENST00000493957 ITGA6P23229 1130 aa14.71□□□□□ -0.05
UBA3-211ENST00000493957 CC2D2BQ6DHV5 1058 aa14.71□□□□□ -0.05
UBA3-211ENST00000493957 LMBR1LQ6UX01 489 aa14.71□□□□□ -0.05
UBA3-211ENST00000493957 ANKRD18AQ8IVF6 992 aa14.71□□□□□ -0.05
UBA3-211ENST00000493957 ARHGAP45Q92619 1136 aa14.71□□□□□ -0.05
UBA3-211ENST00000493957 GPR101Q96P66 508 aaPredicted RBP14.71□□□□□ -0.05
UBA3-211ENST00000493957 BICC1Q9H694 974 aaKnown RBP14.71□□□□□ -0.05
UBA3-211ENST00000493957 PSME4Q14997 1843 aa14.71□□□□□ -0.06
UBA3-211ENST00000493957 WTIPA6NIX2 430 aaPredicted RBP14.7□□□□□ -0.06
UBA3-211ENST00000493957 IARSP41252 1262 aaKnown RBP14.7□□□□□ -0.06
UBA3-211ENST00000493957 CCT4P50991 539 aaKnown RBP14.7□□□□□ -0.06
UBA3-211ENST00000493957 DPP8Q6V1X1 898 aaPredicted RBP14.7□□□□□ -0.06
UBA3-211ENST00000493957 ATF7IPQ6VMQ6 1270 aa14.7□□□□□ -0.06
UBA3-211ENST00000493957 MPNDQ8N594 471 aa14.7□□□□□ -0.06
UBA3-211ENST00000493957 ANKRD44Q8N8A2 993 aa14.7□□□□□ -0.06
UBA3-211ENST00000493957 CHMP3Q9Y3E7 222 aa14.7□□□□□ -0.06
UBA3-211ENST00000493957 ZNF646O15015 1829 aaPredicted RBP14.7□□□□□ -0.06
UBA3-211ENST00000493957 RLBP1P12271 317 aa14.69□□□□□ -0.06
UBA3-211ENST00000493957 AOC3Q16853 763 aa14.69□□□□□ -0.06
UBA3-211ENST00000493957 ZKSCAN2Q63HK3 967 aa14.69□□□□□ -0.06
UBA3-211ENST00000493957 INTS3Q68E01 1043 aaKnown RBP14.69□□□□□ -0.06
UBA3-211ENST00000493957 TMC4Q7Z404 712 aa14.69□□□□□ -0.06
UBA3-211ENST00000493957 ZNF594Q96JF6 807 aaPredicted RBP14.69□□□□□ -0.06
UBA3-211ENST00000493957 CDC5LQ99459 802 aaKnown RBP14.69□□□□□ -0.06
UBA3-211ENST00000493957 MEIS3Q99687 375 aa14.69□□□□□ -0.06
UBA3-211ENST00000493957 WDR90Q96KV7 1748 aa14.69□□□□□ -0.06
UBA3-211ENST00000493957 ZNF541Q9H0D2 1346 aa14.68□□□□□ -0.06
UBA3-211ENST00000493957 IPO8O15397 1037 aaKnown RBP14.68□□□□□ -0.06
UBA3-211ENST00000493957 TMEM57Q8N5G2 664 aa14.68□□□□□ -0.06
UBA3-211ENST00000493957 FAM163AQ96GL9 167 aaPredicted RBP14.68□□□□□ -0.06
UBA3-211ENST00000493957 RTFDC1Q9BY42 306 aaPredicted RBP14.68□□□□□ -0.06
UBA3-211ENST00000493957 POLLQ9UGP5 575 aa14.68□□□□□ -0.06
UBA3-211ENST00000493957 NSFL1CQ9UNZ2 370 aaKnown RBP14.68□□□□□ -0.06
UBA3-211ENST00000493957 ANKRD18BA2A2Z9 1011 aa14.67□□□□□ -0.06
UBA3-211ENST00000493957 PPIP5K2O43314 1243 aa14.67□□□□□ -0.06
UBA3-211ENST00000493957 RABL6Q3YEC7 729 aaPredicted RBP14.67□□□□□ -0.06
UBA3-211ENST00000493957 LARGE2Q8N3Y3 721 aa14.67□□□□□ -0.06
UBA3-211ENST00000493957 TMX4Q9H1E5 349 aaPredicted RBP14.67□□□□□ -0.06
UBA3-211ENST00000493957 NMRK2Q9NPI5 230 aa14.67□□□□□ -0.06
UBA3-211ENST00000493957 RCAN3Q9UKA8 241 aa14.67□□□□□ -0.06
UBA3-211ENST00000493957 IFIT5Q13325 482 aaKnown RBP14.66□□□□□ -0.06
UBA3-211ENST00000493957 GRIPAP1Q4V328 841 aa14.66□□□□□ -0.06
UBA3-211ENST00000493957 TBC1D16Q8TBP0 767 aa14.66□□□□□ -0.06
UBA3-211ENST00000493957 GPBP1L1Q9HC44 474 aaPredicted RBP14.66□□□□□ -0.06
UBA3-211ENST00000493957 BSDC1Q9NW68 430 aaPredicted RBP14.66□□□□□ -0.06
UBA3-211ENST00000493957 MINPP1Q9UNW1 487 aa14.66□□□□□ -0.06
UBA3-211ENST00000493957 SCN4AP35499 1836 aa14.66□□□□□ -0.06
UBA3-211ENST00000493957 ZC3H4Q9UPT8 1303 aaKnown RBP14.66□□□□□ -0.06
UBA3-211ENST00000493957 C6orf229H3BNL8 230 aa14.65□□□□□ -0.06
UBA3-211ENST00000493957 RIMBP2O15034 1052 aa14.65□□□□□ -0.06
UBA3-211ENST00000493957 PLIN1O60240 522 aa14.65□□□□□ -0.06
UBA3-211ENST00000493957 UFL1O94874 794 aa14.65□□□□□ -0.06
UBA3-211ENST00000493957 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
UBA3-211ENST00000493957 IGHMBP2P38935 993 aaKnown RBP14.65□□□□□ -0.06
UBA3-211ENST00000493957 KLHDC4Q8TBB5 520 aa14.65□□□□□ -0.06
UBA3-211ENST00000493957 PUS3Q9BZE2 481 aaKnown RBP14.65□□□□□ -0.06
UBA3-211ENST00000493957 PODXL2Q9NZ53 605 aa14.65□□□□□ -0.06
UBA3-211ENST00000493957 ANKIB1Q9P2G1 1089 aa14.65□□□□□ -0.06
UBA3-211ENST00000493957 LRRFIP2Q9Y608 721 aaKnown RBP14.65□□□□□ -0.06
UBA3-211ENST00000493957 GLTPD2A6NH11 291 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 FZD9O00144 591 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 SNAP23O00161 211 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 DDNO94850 711 aaPredicted RBP14.64□□□□□ -0.07
UBA3-211ENST00000493957 KIAA2012Q0VF49 1180 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 CCDC57Q2TAC2 916 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 SUPT20HQ8NEM7 779 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 HELBQ8NG08 1087 aaPredicted RBP14.64□□□□□ -0.07
UBA3-211ENST00000493957 PANK1Q8TE04 598 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 SCUBE2Q9NQ36 999 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 XDHP47989 1333 aa14.64□□□□□ -0.07
UBA3-211ENST00000493957 YDJCA8MPS7 323 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms