RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 UTYO14607 1347 aa28.63■■■□□ 2.17
SNIP1-203ENST00000493916 UFL1O94874 794 aa28.62■■■□□ 2.17
SNIP1-203ENST00000493916 IGHMBP2P38935 993 aaKnown RBP28.62■■■□□ 2.17
SNIP1-203ENST00000493916 CXCL9Q07325 125 aa28.62■■■□□ 2.17
SNIP1-203ENST00000493916 MINPP1Q9UNW1 487 aa28.61■■■□□ 2.17
SNIP1-203ENST00000493916 YDJCA8MPS7 323 aa28.6■■■□□ 2.17
SNIP1-203ENST00000493916 EPHX2P34913 555 aa28.6■■■□□ 2.17
SNIP1-203ENST00000493916 RARSP54136 660 aaKnown RBP28.6■■■□□ 2.17
SNIP1-203ENST00000493916 ADAMTSL1Q8N6G6 1762 aa28.6■■■□□ 2.17
SNIP1-203ENST00000493916 ANKRD18BA2A2Z9 1011 aa28.59■■■□□ 2.17
SNIP1-203ENST00000493916 RIMBP2O15034 1052 aa28.59■■■□□ 2.17
SNIP1-203ENST00000493916 ATP2B4P23634 1241 aa28.59■■■□□ 2.17
SNIP1-203ENST00000493916 SCNN1DP51172 638 aa28.59■■■□□ 2.17
SNIP1-203ENST00000493916 EPHA10Q5JZY3 1008 aa28.59■■■□□ 2.17
SNIP1-203ENST00000493916 CIAPIN1Q6FI81 312 aa28.59■■■□□ 2.17
SNIP1-203ENST00000493916 LMOD1P29536 600 aaPredicted RBP28.58■■■□□ 2.17
SNIP1-203ENST00000493916 APLP1P51693 650 aa28.58■■■□□ 2.17
SNIP1-203ENST00000493916 TNIP1Q15025 636 aa28.58■■■□□ 2.17
SNIP1-203ENST00000493916 LMBR1LQ6UX01 489 aa28.58■■■□□ 2.17
SNIP1-203ENST00000493916 LDHDQ86WU2 507 aa28.58■■■□□ 2.17
SNIP1-203ENST00000493916 GPR101Q96P66 508 aaPredicted RBP28.58■■■□□ 2.17
SNIP1-203ENST00000493916 ZC3H12CQ9C0D7 883 aaKnown RBP28.58■■■□□ 2.17
SNIP1-203ENST00000493916 NBPF7P0C2Y1 421 aaPredicted RBP28.57■■■□□ 2.16
SNIP1-203ENST00000493916 POTEIP0CG38 1075 aa28.57■■■□□ 2.16
SNIP1-203ENST00000493916 POTEJP0CG39 1038 aa28.57■■■□□ 2.16
SNIP1-203ENST00000493916 IFIT5Q13325 482 aaKnown RBP28.57■■■□□ 2.16
SNIP1-203ENST00000493916 CHADLQ6NUI6 762 aa28.57■■■□□ 2.16
SNIP1-203ENST00000493916 PNMA8AQ86V59 439 aaPredicted RBP28.57■■■□□ 2.16
SNIP1-203ENST00000493916 MPHOSPH8Q99549 860 aa28.57■■■□□ 2.16
SNIP1-203ENST00000493916 DBNDD1Q9H9R9 158 aa28.57■■■□□ 2.16
SNIP1-203ENST00000493916 NOB1Q9ULX3 412 aaKnown RBP28.57■■■□□ 2.16
SNIP1-203ENST00000493916 ECE2O60344 883 aa28.56■■■□□ 2.16
SNIP1-203ENST00000493916 RAD17O75943 681 aa28.56■■■□□ 2.16
SNIP1-203ENST00000493916 ZBED9Q6R2W3 1325 aa28.56■■■□□ 2.16
SNIP1-203ENST00000493916 SUCLG2Q96I99 432 aa28.56■■■□□ 2.16
SNIP1-203ENST00000493916 KIF16BQ96L93 1317 aa28.55■■■□□ 2.16
SNIP1-203ENST00000493916 KAZALD1Q96I82 304 aa28.55■■■□□ 2.16
SNIP1-203ENST00000493916 API5Q9BZZ5 524 aaKnown RBP28.55■■■□□ 2.16
SNIP1-203ENST00000493916 CHMP3Q9Y3E7 222 aa28.55■■■□□ 2.16
SNIP1-203ENST00000493916 MED23Q9ULK4 1368 aa28.54■■■□□ 2.16
SNIP1-203ENST00000493916 ANKRD2Q9GZV1 360 aa28.54■■■□□ 2.16
SNIP1-203ENST00000493916 GPRC5DQ9NZD1 345 aa28.54■■■□□ 2.16
SNIP1-203ENST00000493916 EPS15P42566 896 aa28.53■■■□□ 2.16
SNIP1-203ENST00000493916 GMPSP49915 693 aaPredicted RBP28.53■■■□□ 2.16
SNIP1-203ENST00000493916 CCT4P50991 539 aaKnown RBP28.53■■■□□ 2.16
SNIP1-203ENST00000493916 DOK7Q18PE1 504 aa28.53■■■□□ 2.16
SNIP1-203ENST00000493916 CCDC57Q2TAC2 916 aa28.53■■■□□ 2.16
SNIP1-203ENST00000493916 EAPPQ56P03 285 aaPredicted RBP28.53■■■□□ 2.16
SNIP1-203ENST00000493916 ARHGAP45Q92619 1136 aa28.52■■■□□ 2.16
SNIP1-203ENST00000493916 USP44Q9H0E7 712 aa28.52■■■□□ 2.16
SNIP1-203ENST00000493916 LEMD3Q9Y2U8 911 aa28.52■■■□□ 2.16
SNIP1-203ENST00000493916 RABL6Q3YEC7 729 aaPredicted RBP28.51■■■□□ 2.15
SNIP1-203ENST00000493916 PSMD14O00487 310 aa28.5■■■□□ 2.15
SNIP1-203ENST00000493916 A0A1B0GUL6 1792 aa28.5■■■□□ 2.15
SNIP1-203ENST00000493916 G3V3G9 751 aa28.49■■■□□ 2.15
SNIP1-203ENST00000493916 CHRNDQ07001 517 aa28.49■■■□□ 2.15
SNIP1-203ENST00000493916 DCAF8Q5TAQ9 597 aa28.49■■■□□ 2.15
SNIP1-203ENST00000493916 USP50Q70EL3 339 aaPredicted RBP28.49■■■□□ 2.15
SNIP1-203ENST00000493916 BICC1Q9H694 974 aaKnown RBP28.49■■■□□ 2.15
SNIP1-203ENST00000493916 ADARB2Q9NS39 739 aaKnown RBP28.49■■■□□ 2.15
SNIP1-203ENST00000493916 WTIPA6NIX2 430 aaPredicted RBP28.48■■■□□ 2.15
SNIP1-203ENST00000493916 TAF7LQ5H9L4 462 aa28.48■■■□□ 2.15
SNIP1-203ENST00000493916 ANKRD44Q8N8A2 993 aa28.48■■■□□ 2.15
SNIP1-203ENST00000493916 SCN9AQ15858 1988 aa28.48■■■□□ 2.15
SNIP1-203ENST00000493916 ZNF804BA4D1E1 1349 aa28.47■■■□□ 2.15
SNIP1-203ENST00000493916 ZNF609O15014 1411 aa28.47■■■□□ 2.15
SNIP1-203ENST00000493916 RPS12P25398 132 aaKnown RBP28.47■■■□□ 2.15
SNIP1-203ENST00000493916 DPF2Q92785 391 aa28.47■■■□□ 2.15
SNIP1-203ENST00000493916 KCNQ5Q9NR82 932 aa28.47■■■□□ 2.15
SNIP1-203ENST00000493916 CLEC11AQ9Y240 323 aa28.47■■■□□ 2.15
SNIP1-203ENST00000493916 PSME4Q14997 1843 aa28.46■■■□□ 2.15
SNIP1-203ENST00000493916 PODNQ7Z5L7 613 aa28.46■■■□□ 2.15
SNIP1-203ENST00000493916 ZNF594Q96JF6 807 aaPredicted RBP28.46■■■□□ 2.15
SNIP1-203ENST00000493916 VIL1P09327 827 aaKnown RBP28.45■■■□□ 2.14
SNIP1-203ENST00000493916 LDHAL6AQ6ZMR3 332 aa28.45■■■□□ 2.14
SNIP1-203ENST00000493916 ZBTB12Q9Y330 459 aaPredicted RBP28.45■■■□□ 2.14
SNIP1-203ENST00000493916 PASKQ96RG2 1323 aa28.44■■■□□ 2.14
SNIP1-203ENST00000493916 IPO8O15397 1037 aaKnown RBP28.44■■■□□ 2.14
SNIP1-203ENST00000493916 BCAR3O75815 825 aa28.43■■■□□ 2.14
SNIP1-203ENST00000493916 KCNJ4P48050 445 aa28.43■■■□□ 2.14
SNIP1-203ENST00000493916 COA1Q9GZY4 146 aa28.43■■■□□ 2.14
SNIP1-203ENST00000493916 CNNM1Q9NRU3 951 aa28.43■■■□□ 2.14
SNIP1-203ENST00000493916 CNOT7Q9UIV1 285 aaKnown RBP28.43■■■□□ 2.14
SNIP1-203ENST00000493916 ITGBL1O95965 494 aaPredicted RBP28.42■■■□□ 2.14
SNIP1-203ENST00000493916 INTS3Q68E01 1043 aaKnown RBP28.42■■■□□ 2.14
SNIP1-203ENST00000493916 TXNRD3Q86VQ6 643 aa28.42■■■□□ 2.14
SNIP1-203ENST00000493916 MICALL2Q8IY33 904 aa28.42■■■□□ 2.14
SNIP1-203ENST00000493916 IRS2Q9Y4H2 1338 aa28.42■■■□□ 2.14
SNIP1-203ENST00000493916 H7C1D1 291 aa28.41■■■□□ 2.14
SNIP1-203ENST00000493916 TAF5LO75529 589 aa28.41■■■□□ 2.14
SNIP1-203ENST00000493916 KLRK1P26718 216 aa28.41■■■□□ 2.14
SNIP1-203ENST00000493916 MAP1SQ66K74 1059 aaPredicted RBP28.41■■■□□ 2.14
SNIP1-203ENST00000493916 C15orf52Q6ZUT6 534 aaKnown RBP28.41■■■□□ 2.14
SNIP1-203ENST00000493916 UBTFL1P0CB47 393 aaPredicted RBP28.4■■■□□ 2.14
SNIP1-203ENST00000493916 TRIM27P14373 513 aa28.4■■■□□ 2.14
SNIP1-203ENST00000493916 ATF7IPQ6VMQ6 1270 aa28.4■■■□□ 2.14
SNIP1-203ENST00000493916 CNTROBQ8N137 903 aa28.4■■■□□ 2.14
SNIP1-203ENST00000493916 DNAJC5GQ8N7S2 189 aa28.4■■■□□ 2.14
SNIP1-203ENST00000493916 HELBQ8NG08 1087 aaPredicted RBP28.4■■■□□ 2.14
SNIP1-203ENST00000493916 SHTN1A0MZ66 631 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms