RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 DDX46Q7L014 1031 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 RGL2O15211 777 aa12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 PDIA4P13667 645 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 ITGA6P23229 1130 aa12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 WDR33Q9C0J8 1336 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 GOLIM4O00461 696 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 ZMYM1Q5SVZ6 1142 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 BLOC1S2Q6QNY1 142 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 ZNF512BQ96KM6 892 aaPredicted RBP12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 UBN2Q6ZU65 1347 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 ACSBG1Q96GR2 724 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 XAGE2Q96GT9 111 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 DSCC1Q9BVC3 393 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 GREM2Q9H772 168 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
PHACTR4-204ENST00000493669 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 LDHAL6AQ6ZMR3 332 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 RNF113AO15541 343 aaKnown RBP12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 LAMB2P55268 1798 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 METTL24Q5JXM2 366 aa12.9□□□□□ -0.34
PHACTR4-204ENST00000493669 RTL9Q8NET4 1388 aa12.9□□□□□ -0.35
PHACTR4-204ENST00000493669 UBAP1LF5GYI3 381 aa12.9□□□□□ -0.35
PHACTR4-204ENST00000493669 RPS6KB1P23443 525 aa12.9□□□□□ -0.35
PHACTR4-204ENST00000493669 ITPK1Q13572 414 aa12.9□□□□□ -0.35
PHACTR4-204ENST00000493669 FNBP4Q8N3X1 1017 aaPredicted RBP12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 UTP14AQ9BVJ6 771 aaKnown RBP12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 NDUFB9Q9Y6M9 179 aa12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 BCORQ6W2J9 1755 aa12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 MROH5Q6ZUA9 1318 aa12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 SYNE4Q8N205 404 aa12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 DDX49Q9Y6V7 483 aaKnown RBP12.89□□□□□ -0.35
PHACTR4-204ENST00000493669 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
PHACTR4-204ENST00000493669 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
PHACTR4-204ENST00000493669 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
PHACTR4-204ENST00000493669 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
PHACTR4-204ENST00000493669 CPA1P15085 419 aa12.88□□□□□ -0.35
PHACTR4-204ENST00000493669 MYH14Q7Z406 1995 aaKnown RBP12.88□□□□□ -0.35
PHACTR4-204ENST00000493669 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
PHACTR4-204ENST00000493669 A0A0G2JS52 829 aa12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 CLEC4GQ6UXB4 293 aa12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 NGLY1Q96IV0 654 aa12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 PDE8BO95263 885 aa12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 ADORA1P30542 326 aa12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 SUSD4Q5VX71 490 aa12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
PHACTR4-204ENST00000493669 MAST3O60307 1309 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 CNTNAP4Q9C0A0 1308 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 MRE11P49959 708 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 CCDC129Q6ZRS4 1044 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 LARGE1O95461 756 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 MBD3O95983 291 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 CYP21A2P08686 494 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 ME3Q16798 604 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 ZSCAN25Q6NSZ9 544 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 C8orf37Q96NL8 207 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 DDX60Q8IY21 1712 aaKnown RBP12.86□□□□□ -0.35
PHACTR4-204ENST00000493669 FKBP4Q02790 459 aaKnown RBP eCLIP12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 PUM3Q15397 648 aaKnown RBP12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 STX6O43752 255 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 NTSR2O95665 410 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 LPIN2Q92539 896 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 MYH7P12883 1935 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 KCNQ2O43526 872 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 APPBP2Q92624 585 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
PHACTR4-204ENST00000493669 NHSQ6T4R5 1651 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 HSPD1P10809 573 aaKnown RBP12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 SYT1P21579 422 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 FGFR2P21802 821 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms