RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
NUDCD3-210ENST00000493613 DPF2Q92785 391 aa13.26□□□□□ -0.29
NUDCD3-210ENST00000493613 BEGAINQ9BUH8 593 aa13.26□□□□□ -0.29
NUDCD3-210ENST00000493613 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
NUDCD3-210ENST00000493613 A0A1B0GUL6 1792 aa13.25□□□□□ -0.29
NUDCD3-210ENST00000493613 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
NUDCD3-210ENST00000493613 PCCAP05165 728 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-210ENST00000493613 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
NUDCD3-210ENST00000493613 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
NUDCD3-210ENST00000493613 CHMP4AQ9BY43 222 aa13.25□□□□□ -0.29
NUDCD3-210ENST00000493613 CWC25Q9NXE8 425 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-210ENST00000493613 RTL9Q8NET4 1388 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 PDE8AO60658 829 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 AOC2O75106 756 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 RPS12P25398 132 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 MAP2K2P36507 400 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 CCDC152Q4G0S7 254 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 SAMD7Q7Z3H4 446 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 HHIPL1Q96JK4 782 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 ZC3H12CQ9C0D7 883 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
NUDCD3-210ENST00000493613 G3V3G9 751 aa13.23□□□□□ -0.29
NUDCD3-210ENST00000493613 UFL1O94874 794 aa13.23□□□□□ -0.29
NUDCD3-210ENST00000493613 TBC1D10BQ4KMP7 808 aaPredicted RBP13.23□□□□□ -0.29
NUDCD3-210ENST00000493613 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
NUDCD3-210ENST00000493613 USP48Q86UV5 1035 aa13.23□□□□□ -0.29
NUDCD3-210ENST00000493613 JARID2Q92833 1246 aaPredicted RBP13.23□□□□□ -0.29
NUDCD3-210ENST00000493613 CCDC85AQ96PX6 553 aaPredicted RBP13.23□□□□□ -0.29
NUDCD3-210ENST00000493613 MAP3K2Q9Y2U5 619 aa13.23□□□□□ -0.29
NUDCD3-210ENST00000493613 EGFRP00533 1210 aa13.22□□□□□ -0.29
NUDCD3-210ENST00000493613 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
NUDCD3-210ENST00000493613 TSR2Q969E8 191 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-210ENST00000493613 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
NUDCD3-210ENST00000493613 ECM29Q5VYK3 1845 aa13.22□□□□□ -0.29
NUDCD3-210ENST00000493613 CCDC184Q52MB2 194 aa13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 RBM26Q5T8P6 1007 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 DLK2Q6UY11 383 aa13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 KSR2Q6VAB6 950 aa13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 ANKRD18AQ8IVF6 992 aa13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 DCPSQ96C86 337 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 STK31Q9BXU1 1019 aa13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
NUDCD3-210ENST00000493613 ZNF609O15014 1411 aa13.21□□□□□ -0.3
NUDCD3-210ENST00000493613 XDHP47989 1333 aa13.2□□□□□ -0.3
NUDCD3-210ENST00000493613 PI4KAP2A4QPH2 592 aa13.2□□□□□ -0.3
NUDCD3-210ENST00000493613 VIL1P09327 827 aaKnown RBP13.2□□□□□ -0.3
NUDCD3-210ENST00000493613 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-210ENST00000493613 HUNKP57058 714 aa13.2□□□□□ -0.3
NUDCD3-210ENST00000493613 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
NUDCD3-210ENST00000493613 KIF4BQ2VIQ3 1234 aa13.2□□□□□ -0.3
NUDCD3-210ENST00000493613 PI4KAP1Q8N8J0 262 aa13.2□□□□□ -0.3
NUDCD3-210ENST00000493613 ADM5C9JUS6 153 aa13.19□□□□□ -0.3
NUDCD3-210ENST00000493613 CA12O43570 354 aa13.19□□□□□ -0.3
NUDCD3-210ENST00000493613 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
NUDCD3-210ENST00000493613 CTSWP56202 376 aa13.19□□□□□ -0.3
NUDCD3-210ENST00000493613 CCDC27Q2M243 656 aa13.19□□□□□ -0.3
NUDCD3-210ENST00000493613 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
NUDCD3-210ENST00000493613 CDC5LQ99459 802 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-210ENST00000493613 PAPPA2Q9BXP8 1791 aa13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 NOGQ13253 232 aa13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 RSBN1LQ6PCB5 846 aaPredicted RBP13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 C2orf69Q8N8R5 385 aa13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 GBA2Q9HCG7 927 aaPredicted RBP13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
NUDCD3-210ENST00000493613 NEURL1BA8MQ27 555 aa13.17□□□□□ -0.3
NUDCD3-210ENST00000493613 ATP2B4P23634 1241 aa13.17□□□□□ -0.3
NUDCD3-210ENST00000493613 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
NUDCD3-210ENST00000493613 AGBL3Q8NEM8 1001 aa13.17□□□□□ -0.3
NUDCD3-210ENST00000493613 GREM2Q9H772 168 aa13.17□□□□□ -0.3
NUDCD3-210ENST00000493613 MED23Q9ULK4 1368 aa13.17□□□□□ -0.3
NUDCD3-210ENST00000493613 ASTN2O75129 1339 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-210ENST00000493613 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
NUDCD3-210ENST00000493613 ZNF280AP59817 542 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-210ENST00000493613 RGMBQ6NW40 437 aa13.16□□□□□ -0.3
NUDCD3-210ENST00000493613 G2E3Q7L622 706 aa13.16□□□□□ -0.3
NUDCD3-210ENST00000493613 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
NUDCD3-210ENST00000493613 PODNQ7Z5L7 613 aa13.16□□□□□ -0.3
NUDCD3-210ENST00000493613 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-210ENST00000493613 IL16Q14005 1332 aa13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 TNRC18O15417 2968 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 USP17L3A6NCW0 530 aa13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 USP17L4A6NCW7 530 aa13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 WTIPA6NIX2 430 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 USP17L8P0C7I0 530 aa13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 ANGEL2Q5VTE6 544 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 ZIC5Q96T25 663 aa13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 MYOZ2Q9NPC6 264 aa13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 MINPP1Q9UNW1 487 aa13.15□□□□□ -0.3
NUDCD3-210ENST00000493613 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-210ENST00000493613 H7C1W4 665 aa13.14□□□□□ -0.31
NUDCD3-210ENST00000493613 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms