RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 FBXO46Q6PJ61 603 aaPredicted RBP21.9■■□□□ 1.1
NECAB3-214ENST00000493590 NECTIN2Q92692 538 aa21.9■■□□□ 1.1
NECAB3-214ENST00000493590 CELF1Q92879 486 aaKnown RBP21.9■■□□□ 1.1
NECAB3-214ENST00000493590 EYA3Q99504 573 aa21.9■■□□□ 1.1
NECAB3-214ENST00000493590 SCAF8Q9UPN6 1271 aaKnown RBP21.9■■□□□ 1.1
NECAB3-214ENST00000493590 SCN9AQ15858 1988 aa21.89■■□□□ 1.09
NECAB3-214ENST00000493590 G3V3G9 751 aa21.89■■□□□ 1.09
NECAB3-214ENST00000493590 MKRN3Q13064 507 aaKnown RBP21.89■■□□□ 1.09
NECAB3-214ENST00000493590 SCARF1Q14162 830 aa21.89■■□□□ 1.09
NECAB3-214ENST00000493590 DCAF8Q5TAQ9 597 aa21.89■■□□□ 1.09
NECAB3-214ENST00000493590 UBE2Q2LH0YL09 131 aa21.88■■□□□ 1.09
NECAB3-214ENST00000493590 GPR25O00155 361 aa21.88■■□□□ 1.09
NECAB3-214ENST00000493590 COPS6Q7L5N1 327 aa21.88■■□□□ 1.09
NECAB3-214ENST00000493590 XAGE3Q8WTP9 111 aa21.88■■□□□ 1.09
NECAB3-214ENST00000493590 TSPYL4Q9UJ04 414 aa21.88■■□□□ 1.09
NECAB3-214ENST00000493590 COL4A1P02462 1669 aa21.88■■□□□ 1.09
NECAB3-214ENST00000493590 FKBP1BP68106 108 aa21.87■■□□□ 1.09
NECAB3-214ENST00000493590 TCIRG1Q13488 830 aa21.87■■□□□ 1.09
NECAB3-214ENST00000493590 TTLL12Q14166 644 aaPredicted RBP21.87■■□□□ 1.09
NECAB3-214ENST00000493590 VIL1P09327 827 aaKnown RBP21.86■■□□□ 1.09
NECAB3-214ENST00000493590 PRAMEF18Q5VWM3 479 aa21.85■■□□□ 1.09
NECAB3-214ENST00000493590 TBC1D16Q8TBP0 767 aa21.85■■□□□ 1.09
NECAB3-214ENST00000493590 ZC3H12CQ9C0D7 883 aaKnown RBP21.85■■□□□ 1.09
NECAB3-214ENST00000493590 NFE2L2Q16236 605 aa21.84■■□□□ 1.09
NECAB3-214ENST00000493590 FKTNO75072 461 aa21.83■■□□□ 1.09
NECAB3-214ENST00000493590 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.09
NECAB3-214ENST00000493590 FAM89AQ96GI7 184 aa21.83■■□□□ 1.09
NECAB3-214ENST00000493590 ZNF280AP59817 542 aaPredicted RBP21.82■■□□□ 1.08
NECAB3-214ENST00000493590 RSBN1LQ6PCB5 846 aaPredicted RBP21.82■■□□□ 1.08
NECAB3-214ENST00000493590 UFL1O94874 794 aa21.81■■□□□ 1.08
NECAB3-214ENST00000493590 R3HDMLQ9H3Y0 253 aa21.81■■□□□ 1.08
NECAB3-214ENST00000493590 MYOZ2Q9NPC6 264 aa21.81■■□□□ 1.08
NECAB3-214ENST00000493590 POTEFA5A3E0 1075 aa21.8■■□□□ 1.08
NECAB3-214ENST00000493590 TM4SF4P48230 202 aa21.8■■□□□ 1.08
NECAB3-214ENST00000493590 SF3B3Q15393 1217 aaKnown RBP21.8■■□□□ 1.08
NECAB3-214ENST00000493590 AGBL3Q8NEM8 1001 aa21.8■■□□□ 1.08
NECAB3-214ENST00000493590 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
NECAB3-214ENST00000493590 ANKIB1Q9P2G1 1089 aa21.8■■□□□ 1.08
NECAB3-214ENST00000493590 MAPK8IP3Q9UPT6 1336 aa21.8■■□□□ 1.08
NECAB3-214ENST00000493590 USP17L8P0C7I0 530 aa21.79■■□□□ 1.08
NECAB3-214ENST00000493590 SREBF2Q12772 1141 aa21.79■■□□□ 1.08
NECAB3-214ENST00000493590 PLEKHF1Q96S99 279 aa21.79■■□□□ 1.08
NECAB3-214ENST00000493590 MKI67P46013 3256 aaKnown RBP21.79■■□□□ 1.08
NECAB3-214ENST00000493590 PITPNM2Q9BZ72 1349 aa21.79■■□□□ 1.08
NECAB3-214ENST00000493590 ATP5J2-PTCD1G3V325 749 aa21.78■■□□□ 1.08
NECAB3-214ENST00000493590 RPS8P62241 208 aaKnown RBP21.78■■□□□ 1.08
NECAB3-214ENST00000493590 NOM1Q5C9Z4 860 aaKnown RBP21.78■■□□□ 1.08
NECAB3-214ENST00000493590 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.78■■□□□ 1.08
NECAB3-214ENST00000493590 TRIM17Q9Y577 477 aa21.78■■□□□ 1.08
NECAB3-214ENST00000493590 FXR1P51114 621 aaKnown RBP eCLIP21.77■■□□□ 1.08
NECAB3-214ENST00000493590 PRKG1Q13976 671 aa21.77■■□□□ 1.08
NECAB3-214ENST00000493590 GGA1Q9UJY5 639 aa21.77■■□□□ 1.08
NECAB3-214ENST00000493590 PSME4Q14997 1843 aa21.77■■□□□ 1.08
NECAB3-214ENST00000493590 NF2P35240 595 aa21.76■■□□□ 1.07
NECAB3-214ENST00000493590 NBPF9Q3BBW0 867 aa21.75■■□□□ 1.07
NECAB3-214ENST00000493590 ZNF609O15014 1411 aa21.74■■□□□ 1.07
NECAB3-214ENST00000493590 IRS4O14654 1257 aaPredicted RBP21.74■■□□□ 1.07
NECAB3-214ENST00000493590 SEC31BQ9NQW1 1179 aa21.74■■□□□ 1.07
NECAB3-214ENST00000493590 PODXL2Q9NZ53 605 aa21.74■■□□□ 1.07
NECAB3-214ENST00000493590 CHPF2Q9P2E5 772 aa21.74■■□□□ 1.07
NECAB3-214ENST00000493590 PTPN12Q05209 780 aaKnown RBP21.73■■□□□ 1.07
NECAB3-214ENST00000493590 INTS3Q68E01 1043 aaKnown RBP21.73■■□□□ 1.07
NECAB3-214ENST00000493590 PLBD2Q8NHP8 589 aa21.73■■□□□ 1.07
NECAB3-214ENST00000493590 GMLQ99445 158 aa21.73■■□□□ 1.07
NECAB3-214ENST00000493590 USP17L3A6NCW0 530 aa21.72■■□□□ 1.07
NECAB3-214ENST00000493590 USP17L4A6NCW7 530 aa21.72■■□□□ 1.07
NECAB3-214ENST00000493590 KRT24Q2M2I5 525 aa21.72■■□□□ 1.07
NECAB3-214ENST00000493590 OTOP1Q7RTM1 612 aa21.72■■□□□ 1.07
NECAB3-214ENST00000493590 USP17L1Q7RTZ2 530 aa21.72■■□□□ 1.07
NECAB3-214ENST00000493590 FBXW7Q969H0 707 aa21.72■■□□□ 1.07
NECAB3-214ENST00000493590 ISCA1Q9BUE6 129 aa21.72■■□□□ 1.07
NECAB3-214ENST00000493590 HTTP42858 3142 aa21.71■■□□□ 1.07
NECAB3-214ENST00000493590 ANKRD13DQ6ZTN6 518 aa21.71■■□□□ 1.07
NECAB3-214ENST00000493590 ARMC9Q7Z3E5 817 aa21.71■■□□□ 1.07
NECAB3-214ENST00000493590 MXD3Q9BW11 206 aa21.71■■□□□ 1.07
NECAB3-214ENST00000493590 CFHR5Q9BXR6 569 aa21.71■■□□□ 1.07
NECAB3-214ENST00000493590 RBBP6Q7Z6E9 1792 aaKnown RBP21.71■■□□□ 1.07
NECAB3-214ENST00000493590 EN2P19622 333 aaPredicted RBP21.7■■□□□ 1.06
NECAB3-214ENST00000493590 RIPK4P57078 832 aa21.7■■□□□ 1.06
NECAB3-214ENST00000493590 CCDC85AQ96PX6 553 aaPredicted RBP21.7■■□□□ 1.06
NECAB3-214ENST00000493590 SASH1O94885 1247 aa21.69■■□□□ 1.06
NECAB3-214ENST00000493590 ALDH1A1P00352 501 aa21.69■■□□□ 1.06
NECAB3-214ENST00000493590 SPRYD7Q5W111 196 aa21.69■■□□□ 1.06
NECAB3-214ENST00000493590 PNNQ9H307 717 aaKnown RBP21.69■■□□□ 1.06
NECAB3-214ENST00000493590 COLQQ9Y215 455 aaPredicted RBP21.69■■□□□ 1.06
NECAB3-214ENST00000493590 CENPFP49454 3210 aa21.69■■□□□ 1.06
NECAB3-214ENST00000493590 OGFOD1Q8N543 542 aa21.68■■□□□ 1.06
NECAB3-214ENST00000493590 ANGEL1Q9UNK9 670 aaKnown RBP21.68■■□□□ 1.06
NECAB3-214ENST00000493590 FZD1Q9UP38 647 aa21.68■■□□□ 1.06
NECAB3-214ENST00000493590 WNT10BO00744 389 aa21.67■■□□□ 1.06
NECAB3-214ENST00000493590 HDGFL1Q5TGJ6 251 aa21.67■■□□□ 1.06
NECAB3-214ENST00000493590 IFNL1Q8IU54 200 aa21.67■■□□□ 1.06
NECAB3-214ENST00000493590 LAS1LQ9Y4W2 734 aaKnown RBP21.67■■□□□ 1.06
NECAB3-214ENST00000493590 XDHP47989 1333 aa21.66■■□□□ 1.06
NECAB3-214ENST00000493590 PODNQ7Z5L7 613 aa21.66■■□□□ 1.06
NECAB3-214ENST00000493590 CD99L2Q8TCZ2 262 aa21.66■■□□□ 1.06
NECAB3-214ENST00000493590 BABAM1Q9NWV8 329 aa21.66■■□□□ 1.06
NECAB3-214ENST00000493590 PTPN22Q9Y2R2 807 aa21.66■■□□□ 1.06
NECAB3-214ENST00000493590 KIAA0100Q14667 2235 aaKnown RBP21.65■■□□□ 1.06
NECAB3-214ENST00000493590 MANSC4A6NHS7 340 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms