RNA–Protein interactions for RNA: ENST00000493006.1

PLD3-215, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 694 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-215ENST00000493006 TNIP1Q15025 636 aa23.31■■□□□ 1.32
PLD3-215ENST00000493006 BEND3Q5T5X7 828 aa23.31■■□□□ 1.32
PLD3-215ENST00000493006 GGA1Q9UJY5 639 aa23.31■■□□□ 1.32
PLD3-215ENST00000493006 MAP1SQ66K74 1059 aaPredicted RBP23.3■■□□□ 1.32
PLD3-215ENST00000493006 XDHP47989 1333 aa23.3■■□□□ 1.32
PLD3-215ENST00000493006 ECE2O60344 883 aa23.29■■□□□ 1.32
PLD3-215ENST00000493006 ITGBL1O95965 494 aaPredicted RBP23.29■■□□□ 1.32
PLD3-215ENST00000493006 SLFN5Q08AF3 891 aa23.29■■□□□ 1.32
PLD3-215ENST00000493006 USP50Q70EL3 339 aaPredicted RBP23.29■■□□□ 1.32
PLD3-215ENST00000493006 BCL2L13Q9BXK5 485 aa23.29■■□□□ 1.32
PLD3-215ENST00000493006 DOK7Q18PE1 504 aa23.28■■□□□ 1.32
PLD3-215ENST00000493006 CNTROBQ8N137 903 aa23.28■■□□□ 1.32
PLD3-215ENST00000493006 ZC3H12CQ9C0D7 883 aaKnown RBP23.28■■□□□ 1.32
PLD3-215ENST00000493006 CREBZFQ9NS37 354 aa23.28■■□□□ 1.32
PLD3-215ENST00000493006 ADARB2Q9NS39 739 aaKnown RBP23.28■■□□□ 1.32
PLD3-215ENST00000493006 BSDC1Q9NW68 430 aaPredicted RBP23.28■■□□□ 1.32
PLD3-215ENST00000493006 FAM161AQ3B820 660 aa23.27■■□□□ 1.32
PLD3-215ENST00000493006 PSMD14O00487 310 aa23.26■■□□□ 1.31
PLD3-215ENST00000493006 CSF1RP07333 972 aa23.26■■□□□ 1.31
PLD3-215ENST00000493006 ITGA6P23229 1130 aa23.26■■□□□ 1.31
PLD3-215ENST00000493006 SCN9AQ15858 1988 aa23.25■■□□□ 1.31
PLD3-215ENST00000493006 ATP2B4P23634 1241 aa23.25■■□□□ 1.31
PLD3-215ENST00000493006 IGHMBP2P38935 993 aaKnown RBP23.25■■□□□ 1.31
PLD3-215ENST00000493006 SLC4A10Q6U841 1118 aa23.25■■□□□ 1.31
PLD3-215ENST00000493006 MRPL50Q8N5N7 158 aaKnown RBP23.25■■□□□ 1.31
PLD3-215ENST00000493006 JMYQ8N9B5 988 aa23.25■■□□□ 1.31
PLD3-215ENST00000493006 CDCA7LQ96GN5 454 aa23.25■■□□□ 1.31
PLD3-215ENST00000493006 MINPP1Q9UNW1 487 aa23.25■■□□□ 1.31
PLD3-215ENST00000493006 GRM8O00222 908 aa23.24■■□□□ 1.31
PLD3-215ENST00000493006 KCNQ5Q9NR82 932 aa23.24■■□□□ 1.31
PLD3-215ENST00000493006 ZBTB12Q9Y330 459 aaPredicted RBP23.24■■□□□ 1.31
PLD3-215ENST00000493006 G3V3G9 751 aa23.23■■□□□ 1.31
PLD3-215ENST00000493006 ALDH1L1O75891 902 aa23.23■■□□□ 1.31
PLD3-215ENST00000493006 DCAF8Q5TAQ9 597 aa23.23■■□□□ 1.31
PLD3-215ENST00000493006 SRCIN1Q9C0H9 1055 aa23.23■■□□□ 1.31
PLD3-215ENST00000493006 CNOT7Q9UIV1 285 aaKnown RBP23.23■■□□□ 1.31
PLD3-215ENST00000493006 SHTN1A0MZ66 631 aa23.22■■□□□ 1.31
PLD3-215ENST00000493006 TMEM88BA6NKF7 163 aa23.22■■□□□ 1.31
PLD3-215ENST00000493006 FOXO4P98177 505 aa23.22■■□□□ 1.31
PLD3-215ENST00000493006 MICALL2Q8IY33 904 aa23.22■■□□□ 1.31
PLD3-215ENST00000493006 SSH1Q8WYL5 1049 aa23.22■■□□□ 1.31
PLD3-215ENST00000493006 DPF2Q92785 391 aa23.22■■□□□ 1.31
PLD3-215ENST00000493006 TRPM4Q8TD43 1214 aa23.21■■□□□ 1.31
PLD3-215ENST00000493006 MPHOSPH8Q99549 860 aa23.21■■□□□ 1.31
PLD3-215ENST00000493006 C9orf78Q9NZ63 289 aaPredicted RBP23.21■■□□□ 1.31
PLD3-215ENST00000493006 MED23Q9ULK4 1368 aa23.21■■□□□ 1.31
PLD3-215ENST00000493006 PSME4Q14997 1843 aa23.21■■□□□ 1.31
PLD3-215ENST00000493006 PTPRCP08575 1304 aa23.2■■□□□ 1.3
PLD3-215ENST00000493006 ANKRD18BA2A2Z9 1011 aa23.2■■□□□ 1.3
PLD3-215ENST00000493006 WTIPA6NIX2 430 aaPredicted RBP23.2■■□□□ 1.3
PLD3-215ENST00000493006 H7C1D1 291 aa23.2■■□□□ 1.3
PLD3-215ENST00000493006 RPS12P25398 132 aaKnown RBP23.2■■□□□ 1.3
PLD3-215ENST00000493006 CCT4P50991 539 aaKnown RBP23.2■■□□□ 1.3
PLD3-215ENST00000493006 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
PLD3-215ENST00000493006 MKRN1Q9UHC7 482 aaKnown RBP23.2■■□□□ 1.3
PLD3-215ENST00000493006 CHMP3Q9Y3E7 222 aa23.2■■□□□ 1.3
PLD3-215ENST00000493006 HIRAP54198 1017 aaPredicted RBP23.19■■□□□ 1.3
PLD3-215ENST00000493006 EPHA10Q5JZY3 1008 aa23.19■■□□□ 1.3
PLD3-215ENST00000493006 CNTNAP1P78357 1384 aa23.18■■□□□ 1.3
PLD3-215ENST00000493006 VIL1P09327 827 aaKnown RBP23.18■■□□□ 1.3
PLD3-215ENST00000493006 IFIT5Q13325 482 aaKnown RBP23.18■■□□□ 1.3
PLD3-215ENST00000493006 LMBR1LQ6UX01 489 aa23.18■■□□□ 1.3
PLD3-215ENST00000493006 ANKRD2Q9GZV1 360 aa23.18■■□□□ 1.3
PLD3-215ENST00000493006 LEMD3Q9Y2U8 911 aa23.18■■□□□ 1.3
PLD3-215ENST00000493006 FMR1Q06787 632 aaKnown RBP eCLIP23.17■■□□□ 1.3
PLD3-215ENST00000493006 ALDH1L2Q3SY69 923 aa23.17■■□□□ 1.3
PLD3-215ENST00000493006 PGAP2Q9UHJ9 254 aa23.17■■□□□ 1.3
PLD3-215ENST00000493006 ZNF609O15014 1411 aa23.16■■□□□ 1.3
PLD3-215ENST00000493006 TRPM7Q96QT4 1865 aa23.16■■□□□ 1.3
PLD3-215ENST00000493006 TRAF5O00463 557 aa23.16■■□□□ 1.3
PLD3-215ENST00000493006 SAMD7Q7Z3H4 446 aa23.16■■□□□ 1.3
PLD3-215ENST00000493006 PODNQ7Z5L7 613 aa23.16■■□□□ 1.3
PLD3-215ENST00000493006 ZC3H15Q8WU90 426 aaKnown RBP23.16■■□□□ 1.3
PLD3-215ENST00000493006 A0A1B0GUL6 1792 aa23.16■■□□□ 1.3
PLD3-215ENST00000493006 ZNF804BA4D1E1 1349 aa23.15■■□□□ 1.3
PLD3-215ENST00000493006 CHRNDQ07001 517 aa23.15■■□□□ 1.3
PLD3-215ENST00000493006 SUCLG2Q96I99 432 aa23.15■■□□□ 1.3
PLD3-215ENST00000493006 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
PLD3-215ENST00000493006 PCNTO95613 3336 aa23.15■■□□□ 1.3
PLD3-215ENST00000493006 UTYO14607 1347 aa23.14■■□□□ 1.3
PLD3-215ENST00000493006 CT47B1P0C2W7 299 aaPredicted RBP23.14■■□□□ 1.29
PLD3-215ENST00000493006 TBC1D10BQ4KMP7 808 aaPredicted RBP23.14■■□□□ 1.29
PLD3-215ENST00000493006 DIEXFQ68CQ4 756 aaKnown RBP23.14■■□□□ 1.29
PLD3-215ENST00000493006 RSBN1LQ6PCB5 846 aaPredicted RBP23.14■■□□□ 1.29
PLD3-215ENST00000493006 GLIS2Q9BZE0 524 aaPredicted RBP23.14■■□□□ 1.29
PLD3-215ENST00000493006 USP17L3A6NCW0 530 aa23.13■■□□□ 1.29
PLD3-215ENST00000493006 USP17L4A6NCW7 530 aa23.13■■□□□ 1.29
PLD3-215ENST00000493006 EGFRP00533 1210 aa23.13■■□□□ 1.29
PLD3-215ENST00000493006 NBPF7P0C2Y1 421 aaPredicted RBP23.13■■□□□ 1.29
PLD3-215ENST00000493006 KCNJ4P48050 445 aa23.13■■□□□ 1.29
PLD3-215ENST00000493006 CCDC57Q2TAC2 916 aa23.13■■□□□ 1.29
PLD3-215ENST00000493006 USP17L1Q7RTZ2 530 aa23.13■■□□□ 1.29
PLD3-215ENST00000493006 TXNRD3Q86VQ6 643 aa23.13■■□□□ 1.29
PLD3-215ENST00000493006 AGBL3Q8NEM8 1001 aa23.13■■□□□ 1.29
PLD3-215ENST00000493006 KLRK1P26718 216 aa23.12■■□□□ 1.29
PLD3-215ENST00000493006 TAF7LQ5H9L4 462 aa23.12■■□□□ 1.29
PLD3-215ENST00000493006 MIER1Q8N108 512 aa23.12■■□□□ 1.29
PLD3-215ENST00000493006 KAZALD1Q96I82 304 aa23.12■■□□□ 1.29
PLD3-215ENST00000493006 ZNF594Q96JF6 807 aaPredicted RBP23.12■■□□□ 1.29
PLD3-215ENST00000493006 COA1Q9GZY4 146 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms