RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 HSP90B1P14625 803 aaKnown RBP14.33□□□□□ -0.12
SND1-215ENST00000492772 ZNF157P51786 506 aaPredicted RBP14.33□□□□□ -0.12
SND1-215ENST00000492772 DLK2Q6UY11 383 aa14.33□□□□□ -0.12
SND1-215ENST00000492772 SULF1Q8IWU6 871 aa14.33□□□□□ -0.12
SND1-215ENST00000492772 TBC1D16Q8TBP0 767 aa14.33□□□□□ -0.12
SND1-215ENST00000492772 HYPKQ9NX55 129 aa14.33□□□□□ -0.12
SND1-215ENST00000492772 GGA3Q9NZ52 723 aa14.33□□□□□ -0.12
SND1-215ENST00000492772 PAPPA2Q9BXP8 1791 aa14.32□□□□□ -0.12
SND1-215ENST00000492772 ATP5J2-PTCD1G3V325 749 aa14.32□□□□□ -0.12
SND1-215ENST00000492772 IRS4O14654 1257 aaPredicted RBP14.32□□□□□ -0.12
SND1-215ENST00000492772 SLC10A3P09131 477 aa14.32□□□□□ -0.12
SND1-215ENST00000492772 KIF23Q02241 960 aaPredicted RBP14.32□□□□□ -0.12
SND1-215ENST00000492772 TRIM28Q13263 835 aaKnown RBP14.32□□□□□ -0.12
SND1-215ENST00000492772 DOK7Q18PE1 504 aa14.32□□□□□ -0.12
SND1-215ENST00000492772 RBM26Q5T8P6 1007 aaKnown RBP14.32□□□□□ -0.12
SND1-215ENST00000492772 ZNF428Q96B54 188 aa14.32□□□□□ -0.12
SND1-215ENST00000492772 ZC3H12CQ9C0D7 883 aaKnown RBP14.32□□□□□ -0.12
SND1-215ENST00000492772 PODXL2Q9NZ53 605 aa14.32□□□□□ -0.12
SND1-215ENST00000492772 LAS1LQ9Y4W2 734 aaKnown RBP14.32□□□□□ -0.12
SND1-215ENST00000492772 VIL1P09327 827 aaKnown RBP14.31□□□□□ -0.12
SND1-215ENST00000492772 RPS8P62241 208 aaKnown RBP14.31□□□□□ -0.12
SND1-215ENST00000492772 NEUROD2Q15784 382 aa14.31□□□□□ -0.12
SND1-215ENST00000492772 REM2Q8IYK8 340 aaPredicted RBP14.31□□□□□ -0.12
SND1-215ENST00000492772 G3V3G9 751 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 UFL1O94874 794 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 RTL5Q5HYW3 569 aaPredicted RBP14.3□□□□□ -0.12
SND1-215ENST00000492772 DCAF8Q5TAQ9 597 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 CCDC146Q8IYE0 955 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 CDCA5Q96FF9 252 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 KCNQ5Q9NR82 932 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 RNF186Q9NXI6 227 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 GGA1Q9UJY5 639 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
SND1-215ENST00000492772 TRPA1O75762 1119 aa14.29□□□□□ -0.12
SND1-215ENST00000492772 ZNF280AP59817 542 aaPredicted RBP14.29□□□□□ -0.12
SND1-215ENST00000492772 FKBP1BP68106 108 aa14.29□□□□□ -0.12
SND1-215ENST00000492772 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
SND1-215ENST00000492772 ZBTB38Q8NAP3 1195 aaPredicted RBP14.29□□□□□ -0.12
SND1-215ENST00000492772 AGBL3Q8NEM8 1001 aa14.29□□□□□ -0.12
SND1-215ENST00000492772 PCDH10Q9P2E7 1040 aa14.29□□□□□ -0.12
SND1-215ENST00000492772 MYBBP1AQ9BQG0 1328 aaKnown RBP14.29□□□□□ -0.12
SND1-215ENST00000492772 PDE4DIPQ5VU43 2346 aa14.29□□□□□ -0.12
SND1-215ENST00000492772 WDR43Q15061 677 aaKnown RBP eCLIP14.28□□□□□ -0.126e-7■□□□□ 9.8
SND1-215ENST00000492772 CCDC152Q4G0S7 254 aa14.28□□□□□ -0.12
SND1-215ENST00000492772 DUSP27Q5VZP5 1158 aa14.28□□□□□ -0.12
SND1-215ENST00000492772 RSBN1LQ6PCB5 846 aaPredicted RBP14.28□□□□□ -0.12
SND1-215ENST00000492772 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
SND1-215ENST00000492772 PITPNM2Q9BZ72 1349 aa14.28□□□□□ -0.12
SND1-215ENST00000492772 ASTN2O75129 1339 aaPredicted RBP14.27□□□□□ -0.12
SND1-215ENST00000492772 XDHP47989 1333 aa14.27□□□□□ -0.12
SND1-215ENST00000492772 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.13
SND1-215ENST00000492772 CTU1Q7Z7A3 348 aaKnown RBP14.27□□□□□ -0.13
SND1-215ENST00000492772 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.13
SND1-215ENST00000492772 CSRNP1Q96S65 589 aa14.27□□□□□ -0.13
SND1-215ENST00000492772 SEC31BQ9NQW1 1179 aa14.27□□□□□ -0.13
SND1-215ENST00000492772 MYH3P11055 1940 aa14.26□□□□□ -0.13
SND1-215ENST00000492772 PCCAP05165 728 aaPredicted RBP14.26□□□□□ -0.13
SND1-215ENST00000492772 SOX10P56693 466 aa14.26□□□□□ -0.13
SND1-215ENST00000492772 SCARF1Q14162 830 aa14.26□□□□□ -0.13
SND1-215ENST00000492772 CCDC191Q8NCU4 936 aa14.26□□□□□ -0.13
SND1-215ENST00000492772 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
SND1-215ENST00000492772 SPEF2Q9C093 1822 aa14.25□□□□□ -0.13
SND1-215ENST00000492772 PDE8AO60658 829 aa14.25□□□□□ -0.13
SND1-215ENST00000492772 USP17L8P0C7I0 530 aa14.25□□□□□ -0.13
SND1-215ENST00000492772 MYD88Q99836 296 aa14.25□□□□□ -0.13
SND1-215ENST00000492772 MYOZ2Q9NPC6 264 aa14.25□□□□□ -0.13
SND1-215ENST00000492772 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
SND1-215ENST00000492772 PODNQ7Z5L7 613 aa14.24□□□□□ -0.13
SND1-215ENST00000492772 ANKRD18AQ8IVF6 992 aa14.24□□□□□ -0.13
SND1-215ENST00000492772 GMLQ99445 158 aa14.24□□□□□ -0.13
SND1-215ENST00000492772 CWC25Q9NXE8 425 aaPredicted RBP14.24□□□□□ -0.13
SND1-215ENST00000492772 MED23Q9ULK4 1368 aa14.23□□□□□ -0.13
SND1-215ENST00000492772 USP17L3A6NCW0 530 aa14.23□□□□□ -0.13
SND1-215ENST00000492772 USP17L4A6NCW7 530 aa14.23□□□□□ -0.13
SND1-215ENST00000492772 ATP2B4P23634 1241 aa14.23□□□□□ -0.13
SND1-215ENST00000492772 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
SND1-215ENST00000492772 PKN2Q16513 984 aaKnown RBP14.23□□□□□ -0.13
SND1-215ENST00000492772 USP17L1Q7RTZ2 530 aa14.23□□□□□ -0.13
SND1-215ENST00000492772 PHAXQ9H814 394 aaKnown RBP14.23□□□□□ -0.13
SND1-215ENST00000492772 MYO3BQ8WXR4 1341 aa14.22□□□□□ -0.13
SND1-215ENST00000492772 DDX58O95786 925 aaKnown RBP14.22□□□□□ -0.13
SND1-215ENST00000492772 ZNF853P0CG23 659 aa14.22□□□□□ -0.13
SND1-215ENST00000492772 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
SND1-215ENST00000492772 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
SND1-215ENST00000492772 IFT57Q9NWB7 429 aa14.22□□□□□ -0.13
SND1-215ENST00000492772 GNAI1P63096 354 aa14.21□□□□□ -0.13
SND1-215ENST00000492772 PRPF38BQ5VTL8 546 aaKnown RBP14.21□□□□□ -0.13
SND1-215ENST00000492772 CCDC85AQ96PX6 553 aaPredicted RBP14.21□□□□□ -0.13
SND1-215ENST00000492772 METTL22Q9BUU2 404 aaPredicted RBP14.21□□□□□ -0.13
SND1-215ENST00000492772 HDAC9Q9UKV0 1011 aa14.21□□□□□ -0.13
SND1-215ENST00000492772 ADAMTS8Q9UP79 889 aa14.21□□□□□ -0.13
SND1-215ENST00000492772 HPS5Q9UPZ3 1129 aa14.21□□□□□ -0.13
SND1-215ENST00000492772 NF2P35240 595 aa14.2□□□□□ -0.14
SND1-215ENST00000492772 MMP14P50281 582 aa14.2□□□□□ -0.14
SND1-215ENST00000492772 CTSWP56202 376 aa14.2□□□□□ -0.14
SND1-215ENST00000492772 NOM1Q5C9Z4 860 aaKnown RBP14.2□□□□□ -0.14
SND1-215ENST00000492772 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
SND1-215ENST00000492772 TTLL12Q14166 644 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms