RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 LAMB2P55268 1798 aa11.77□□□□□ -0.53
HDAC3-212ENST00000492407 ZNF609O15014 1411 aa11.77□□□□□ -0.53
HDAC3-212ENST00000492407 ECE2O60344 883 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 MMP14P50281 582 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 FMR1Q06787 632 aaKnown RBP eCLIP11.76□□□□□ -0.53
HDAC3-212ENST00000492407 NOGQ13253 232 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 C8orf58Q8NAV2 365 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 AGBL3Q8NEM8 1001 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 MYD88Q99836 296 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 DBNDD1Q9H9R9 158 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 GGA1Q9UJY5 639 aa11.76□□□□□ -0.53
HDAC3-212ENST00000492407 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
HDAC3-212ENST00000492407 ATP2B4P23634 1241 aa11.75□□□□□ -0.53
HDAC3-212ENST00000492407 PODNQ7Z5L7 613 aa11.75□□□□□ -0.53
HDAC3-212ENST00000492407 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
HDAC3-212ENST00000492407 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
HDAC3-212ENST00000492407 ZBTB12Q9Y330 459 aaPredicted RBP11.75□□□□□ -0.53
HDAC3-212ENST00000492407 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
HDAC3-212ENST00000492407 G3V3G9 751 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-212ENST00000492407 ZNF280AP59817 542 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-212ENST00000492407 NEXNQ0ZGT2 675 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 RTL5Q5HYW3 569 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-212ENST00000492407 DCAF8Q5TAQ9 597 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 USP48Q86UV5 1035 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 ANKRD18AQ8IVF6 992 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 CCDC102AQ96A19 550 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 CDC5LQ99459 802 aaKnown RBP11.74□□□□□ -0.53
HDAC3-212ENST00000492407 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 XDHP47989 1333 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 IL16Q14005 1332 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 RTL9Q8NET4 1388 aa11.74□□□□□ -0.53
HDAC3-212ENST00000492407 UFL1O94874 794 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 SAMD7Q7Z3H4 446 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-212ENST00000492407 C2orf69Q8N8R5 385 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 ABHD8Q96I13 439 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 TRPM7Q96QT4 1865 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 SEC31BQ9NQW1 1179 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 BSDC1Q9NW68 430 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-212ENST00000492407 MAP3K2Q9Y2U5 619 aa11.73□□□□□ -0.53
HDAC3-212ENST00000492407 AOC2O75106 756 aa11.72□□□□□ -0.53
HDAC3-212ENST00000492407 HUNKP57058 714 aa11.72□□□□□ -0.53
HDAC3-212ENST00000492407 FKBP1BP68106 108 aa11.72□□□□□ -0.53
HDAC3-212ENST00000492407 GRM1Q13255 1194 aa11.72□□□□□ -0.53
HDAC3-212ENST00000492407 KIF4BQ2VIQ3 1234 aa11.72□□□□□ -0.53
HDAC3-212ENST00000492407 TBC1D10BQ4KMP7 808 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-212ENST00000492407 RGMBQ6NW40 437 aa11.72□□□□□ -0.53
HDAC3-212ENST00000492407 RSBN1LQ6PCB5 846 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-212ENST00000492407 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
HDAC3-212ENST00000492407 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
HDAC3-212ENST00000492407 GBA2Q9HCG7 927 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-212ENST00000492407 PITPNM2Q9BZ72 1349 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 SHTN1A0MZ66 631 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 PI4KAP2A4QPH2 592 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 H7C1W4 665 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 IGKV5-2P06315 115 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 CTSWP56202 376 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 WWC1Q8IX03 1113 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 PI4KAP1Q8N8J0 262 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 TTLL11Q8NHH1 800 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 ZNF428Q96B54 188 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 GMLQ99445 158 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 KCNQ5Q9NR82 932 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 SAGE1Q9NXZ1 904 aa11.71□□□□□ -0.53
HDAC3-212ENST00000492407 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 USP17L3A6NCW0 530 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 USP17L4A6NCW7 530 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 EGFRP00533 1210 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 USP17L8P0C7I0 530 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-212ENST00000492407 USP17L1Q7RTZ2 530 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 MINPP1Q9UNW1 487 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
HDAC3-212ENST00000492407 MYO3BQ8WXR4 1341 aa11.69□□□□□ -0.54
HDAC3-212ENST00000492407 NEURL1BA8MQ27 555 aa11.69□□□□□ -0.54
HDAC3-212ENST00000492407 FAM155AB1AL88 458 aaPredicted RBP11.69□□□□□ -0.54
HDAC3-212ENST00000492407 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
HDAC3-212ENST00000492407 RGS19P49795 217 aa11.69□□□□□ -0.54
HDAC3-212ENST00000492407 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
HDAC3-212ENST00000492407 ANKRD2Q9GZV1 360 aa11.69□□□□□ -0.54
HDAC3-212ENST00000492407 COA1Q9GZY4 146 aa11.69□□□□□ -0.54
HDAC3-212ENST00000492407 IGHMBP2P38935 993 aaKnown RBP11.68□□□□□ -0.54
HDAC3-212ENST00000492407 CCT4P50991 539 aaKnown RBP11.68□□□□□ -0.54
HDAC3-212ENST00000492407 SCARF1Q14162 830 aa11.68□□□□□ -0.54
HDAC3-212ENST00000492407 GCKRQ14397 625 aa11.68□□□□□ -0.54
HDAC3-212ENST00000492407 STRIP1Q5VSL9 837 aa11.68□□□□□ -0.54
HDAC3-212ENST00000492407 WDR63Q8IWG1 891 aa11.68□□□□□ -0.54
HDAC3-212ENST00000492407 MYH16Q9H6N6 1097 aa11.68□□□□□ -0.54
HDAC3-212ENST00000492407 MYOZ2Q9NPC6 264 aa11.68□□□□□ -0.54
HDAC3-212ENST00000492407 GGA3Q9NZ52 723 aa11.68□□□□□ -0.54
HDAC3-212ENST00000492407 TAF1P21675 1872 aa11.68□□□□□ -0.54
HDAC3-212ENST00000492407 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
HDAC3-212ENST00000492407 CSF1RP07333 972 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms