RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 ZNF280AP59817 542 aaPredicted RBP20.54■□□□□ 0.88
CDK11A-220ENST00000492390 SCARF1Q14162 830 aa20.54■□□□□ 0.88
CDK11A-220ENST00000492390 TAF1P21675 1872 aa20.54■□□□□ 0.88
CDK11A-220ENST00000492390 EIF2S2P20042 333 aaKnown RBP20.53■□□□□ 0.88
CDK11A-220ENST00000492390 PPP2R1AP30153 589 aa20.53■□□□□ 0.88
CDK11A-220ENST00000492390 GPSM2P81274 684 aa20.53■□□□□ 0.88
CDK11A-220ENST00000492390 CELF1Q92879 486 aaKnown RBP20.53■□□□□ 0.88
CDK11A-220ENST00000492390 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
CDK11A-220ENST00000492390 PITPNM2Q9BZ72 1349 aa20.53■□□□□ 0.88
CDK11A-220ENST00000492390 SF3B3Q15393 1217 aaKnown RBP20.52■□□□□ 0.88
CDK11A-220ENST00000492390 PROSER3Q2NL68 480 aa20.52■□□□□ 0.88
CDK11A-220ENST00000492390 COPS6Q7L5N1 327 aa20.52■□□□□ 0.88
CDK11A-220ENST00000492390 AGBL3Q8NEM8 1001 aa20.52■□□□□ 0.88
CDK11A-220ENST00000492390 NECTIN2Q92692 538 aa20.52■□□□□ 0.88
CDK11A-220ENST00000492390 CFHR5Q9BXR6 569 aa20.52■□□□□ 0.88
CDK11A-220ENST00000492390 ZC3H12CQ9C0D7 883 aaKnown RBP20.52■□□□□ 0.88
CDK11A-220ENST00000492390 ZNF609O15014 1411 aa20.52■□□□□ 0.87
CDK11A-220ENST00000492390 FKTNO75072 461 aa20.51■□□□□ 0.87
CDK11A-220ENST00000492390 ANXA1P04083 346 aa20.51■□□□□ 0.87
CDK11A-220ENST00000492390 TBC1D16Q8TBP0 767 aa20.51■□□□□ 0.87
CDK11A-220ENST00000492390 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
CDK11A-220ENST00000492390 UBE2Q2LH0YL09 131 aa20.5■□□□□ 0.87
CDK11A-220ENST00000492390 G3V3G9 751 aa20.49■□□□□ 0.87
CDK11A-220ENST00000492390 SREBF2Q12772 1141 aa20.49■□□□□ 0.87
CDK11A-220ENST00000492390 AIMP1Q12904 312 aaKnown RBP20.49■□□□□ 0.87
CDK11A-220ENST00000492390 NFE2L2Q16236 605 aa20.49■□□□□ 0.87
CDK11A-220ENST00000492390 DCAF8Q5TAQ9 597 aa20.49■□□□□ 0.87
CDK11A-220ENST00000492390 INTS3Q68E01 1043 aaKnown RBP20.49■□□□□ 0.87
CDK11A-220ENST00000492390 RSBN1LQ6PCB5 846 aaPredicted RBP20.49■□□□□ 0.87
CDK11A-220ENST00000492390 MOB2Q70IA6 237 aa20.49■□□□□ 0.87
CDK11A-220ENST00000492390 XAGE3Q8WTP9 111 aa20.49■□□□□ 0.87
CDK11A-220ENST00000492390 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
CDK11A-220ENST00000492390 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
CDK11A-220ENST00000492390 SCN9AQ15858 1988 aa20.47■□□□□ 0.87
CDK11A-220ENST00000492390 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
CDK11A-220ENST00000492390 MYOZ2Q9NPC6 264 aa20.47■□□□□ 0.87
CDK11A-220ENST00000492390 USP17L8P0C7I0 530 aa20.46■□□□□ 0.87
CDK11A-220ENST00000492390 FXR1P51114 621 aaKnown RBP eCLIP20.46■□□□□ 0.87
CDK11A-220ENST00000492390 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
CDK11A-220ENST00000492390 TTLL12Q14166 644 aaPredicted RBP20.45■□□□□ 0.86
CDK11A-220ENST00000492390 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
CDK11A-220ENST00000492390 FAM89AQ96GI7 184 aa20.45■□□□□ 0.86
CDK11A-220ENST00000492390 GMLQ99445 158 aa20.45■□□□□ 0.86
CDK11A-220ENST00000492390 BABAM1Q9NWV8 329 aa20.45■□□□□ 0.86
CDK11A-220ENST00000492390 ALDH1A1P00352 501 aa20.44■□□□□ 0.86
CDK11A-220ENST00000492390 NF2P35240 595 aa20.44■□□□□ 0.86
CDK11A-220ENST00000492390 POTEFA5A3E0 1075 aa20.43■□□□□ 0.86
CDK11A-220ENST00000492390 UFL1O94874 794 aa20.43■□□□□ 0.86
CDK11A-220ENST00000492390 R3HDMLQ9H3Y0 253 aa20.43■□□□□ 0.86
CDK11A-220ENST00000492390 GGA1Q9UJY5 639 aa20.43■□□□□ 0.86
CDK11A-220ENST00000492390 MKRN3Q13064 507 aaKnown RBP20.42■□□□□ 0.86
CDK11A-220ENST00000492390 PRAMEF18Q5VWM3 479 aa20.42■□□□□ 0.86
CDK11A-220ENST00000492390 ISCA1Q9BUE6 129 aa20.42■□□□□ 0.86
CDK11A-220ENST00000492390 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
CDK11A-220ENST00000492390 ANKIB1Q9P2G1 1089 aa20.42■□□□□ 0.86
CDK11A-220ENST00000492390 TRIM17Q9Y577 477 aa20.42■□□□□ 0.86
CDK11A-220ENST00000492390 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
CDK11A-220ENST00000492390 ZNF428Q96B54 188 aa20.41■□□□□ 0.86
CDK11A-220ENST00000492390 SCAF8Q9UPN6 1271 aaKnown RBP20.41■□□□□ 0.86
CDK11A-220ENST00000492390 COL4A1P02462 1669 aa20.41■□□□□ 0.86
CDK11A-220ENST00000492390 USP17L3A6NCW0 530 aa20.4■□□□□ 0.86
CDK11A-220ENST00000492390 USP17L4A6NCW7 530 aa20.4■□□□□ 0.86
CDK11A-220ENST00000492390 OTOP1Q7RTM1 612 aa20.4■□□□□ 0.86
CDK11A-220ENST00000492390 USP17L1Q7RTZ2 530 aa20.4■□□□□ 0.86
CDK11A-220ENST00000492390 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
CDK11A-220ENST00000492390 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
CDK11A-220ENST00000492390 IRS4O14654 1257 aaPredicted RBP20.39■□□□□ 0.85
CDK11A-220ENST00000492390 INHBEP58166 350 aa20.39■□□□□ 0.85
CDK11A-220ENST00000492390 PTPN12Q05209 780 aaKnown RBP20.39■□□□□ 0.85
CDK11A-220ENST00000492390 NBPF9Q3BBW0 867 aa20.39■□□□□ 0.85
CDK11A-220ENST00000492390 ANKRD13DQ6ZTN6 518 aa20.39■□□□□ 0.85
CDK11A-220ENST00000492390 ARMC9Q7Z3E5 817 aa20.39■□□□□ 0.85
CDK11A-220ENST00000492390 PSME4Q14997 1843 aa20.39■□□□□ 0.85
CDK11A-220ENST00000492390 SPRYD7Q5W111 196 aa20.38■□□□□ 0.85
CDK11A-220ENST00000492390 KIAA0100Q14667 2235 aaKnown RBP20.38■□□□□ 0.85
CDK11A-220ENST00000492390 MKI67P46013 3256 aaKnown RBP20.38■□□□□ 0.85
CDK11A-220ENST00000492390 ATP5J2-PTCD1G3V325 749 aa20.37■□□□□ 0.85
CDK11A-220ENST00000492390 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
CDK11A-220ENST00000492390 TRIM28Q13263 835 aaKnown RBP20.37■□□□□ 0.85
CDK11A-220ENST00000492390 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
CDK11A-220ENST00000492390 LDLRAD1Q5T700 205 aa20.37■□□□□ 0.85
CDK11A-220ENST00000492390 RBBP6Q7Z6E9 1792 aaKnown RBP20.36■□□□□ 0.85
CDK11A-220ENST00000492390 MANSC4A6NHS7 340 aaPredicted RBP20.36■□□□□ 0.85
CDK11A-220ENST00000492390 WNT10BO00744 389 aa20.36■□□□□ 0.85
CDK11A-220ENST00000492390 HSP90B1P14625 803 aaKnown RBP20.36■□□□□ 0.85
CDK11A-220ENST00000492390 OGFOD1Q8N543 542 aa20.36■□□□□ 0.85
CDK11A-220ENST00000492390 SEC31BQ9NQW1 1179 aa20.36■□□□□ 0.85
CDK11A-220ENST00000492390 PTPN22Q9Y2R2 807 aa20.36■□□□□ 0.85
CDK11A-220ENST00000492390 XDHP47989 1333 aa20.35■□□□□ 0.85
CDK11A-220ENST00000492390 IFNL1Q8IU54 200 aa20.35■□□□□ 0.85
CDK11A-220ENST00000492390 ARMC5Q96C12 935 aa20.35■□□□□ 0.85
CDK11A-220ENST00000492390 ERO1AQ96HE7 468 aa20.35■□□□□ 0.85
CDK11A-220ENST00000492390 CHPF2Q9P2E5 772 aa20.35■□□□□ 0.85
CDK11A-220ENST00000492390 EN2P19622 333 aaPredicted RBP20.34■□□□□ 0.85
CDK11A-220ENST00000492390 MMP14P50281 582 aa20.34■□□□□ 0.85
CDK11A-220ENST00000492390 COLQQ9Y215 455 aaPredicted RBP20.34■□□□□ 0.85
CDK11A-220ENST00000492390 HTTP42858 3142 aa20.33■□□□□ 0.85
CDK11A-220ENST00000492390 ATP2B4P23634 1241 aa20.33■□□□□ 0.85
CDK11A-220ENST00000492390 RIPK4P57078 832 aa20.33■□□□□ 0.85
CDK11A-220ENST00000492390 MYO3BQ8WXR4 1341 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms