RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 VEGFAP15692 232 aaPredicted RBP29.24■■■□□ 2.27
CPNE9-204ENST00000491802 AOC3Q16853 763 aa29.24■■■□□ 2.27
CPNE9-204ENST00000491802 RRAGCQ9HB90 399 aa29.24■■■□□ 2.27
CPNE9-204ENST00000491802 BSDC1Q9NW68 430 aaPredicted RBP29.24■■■□□ 2.27
CPNE9-204ENST00000491802 ZNF541Q9H0D2 1346 aa29.22■■■□□ 2.27
CPNE9-204ENST00000491802 POTECB2RU33 542 aa29.22■■■□□ 2.27
CPNE9-204ENST00000491802 UBTFL1P0CB47 393 aaPredicted RBP29.22■■■□□ 2.27
CPNE9-204ENST00000491802 CCDC57Q2TAC2 916 aa29.22■■■□□ 2.27
CPNE9-204ENST00000491802 NIM1KQ8IY84 436 aa29.22■■■□□ 2.27
CPNE9-204ENST00000491802 MPHOSPH8Q99549 860 aa29.22■■■□□ 2.27
CPNE9-204ENST00000491802 ANKIB1Q9P2G1 1089 aa29.22■■■□□ 2.27
CPNE9-204ENST00000491802 C6orf229H3BNL8 230 aa29.21■■■□□ 2.27
CPNE9-204ENST00000491802 DDNO94850 711 aaPredicted RBP29.21■■■□□ 2.27
CPNE9-204ENST00000491802 RABL6Q3YEC7 729 aaPredicted RBP29.21■■■□□ 2.27
CPNE9-204ENST00000491802 GPC2Q8N158 579 aa29.21■■■□□ 2.27
CPNE9-204ENST00000491802 ANKRD44Q8N8A2 993 aa29.21■■■□□ 2.27
CPNE9-204ENST00000491802 POLLQ9UGP5 575 aa29.21■■■□□ 2.27
CPNE9-204ENST00000491802 XDHP47989 1333 aa29.2■■■□□ 2.27
CPNE9-204ENST00000491802 UFL1O94874 794 aa29.2■■■□□ 2.26
CPNE9-204ENST00000491802 EIF6P56537 245 aaKnown RBP29.2■■■□□ 2.26
CPNE9-204ENST00000491802 TBC1D16Q8TBP0 767 aa29.2■■■□□ 2.26
CPNE9-204ENST00000491802 RBM46Q8TBY0 533 aaKnown RBP29.2■■■□□ 2.26
CPNE9-204ENST00000491802 MEIS3Q99687 375 aa29.2■■■□□ 2.26
CPNE9-204ENST00000491802 GGA1Q9UJY5 639 aa29.2■■■□□ 2.26
CPNE9-204ENST00000491802 MINPP1Q9UNW1 487 aa29.2■■■□□ 2.26
CPNE9-204ENST00000491802 TAF7LQ5H9L4 462 aa29.19■■■□□ 2.26
CPNE9-204ENST00000491802 GPR101Q96P66 508 aaPredicted RBP29.19■■■□□ 2.26
CPNE9-204ENST00000491802 EYA3Q99504 573 aa29.19■■■□□ 2.26
CPNE9-204ENST00000491802 RCAN3Q9UKA8 241 aa29.19■■■□□ 2.26
CPNE9-204ENST00000491802 ZNRF3Q9ULT6 936 aa29.19■■■□□ 2.26
CPNE9-204ENST00000491802 FTSJ3Q8IY81 847 aaKnown RBP29.18■■■□□ 2.26
CPNE9-204ENST00000491802 TMEM57Q8N5G2 664 aa29.18■■■□□ 2.26
CPNE9-204ENST00000491802 WASHC4Q2M389 1173 aa29.17■■■□□ 2.26
CPNE9-204ENST00000491802 ZNF594Q96JF6 807 aaPredicted RBP29.17■■■□□ 2.26
CPNE9-204ENST00000491802 IQCA1LA6NCM1 817 aa29.16■■■□□ 2.26
CPNE9-204ENST00000491802 C16orf71Q8IYS4 520 aaPredicted RBP29.16■■■□□ 2.26
CPNE9-204ENST00000491802 A0A1B0GUL6 1792 aa29.16■■■□□ 2.26
CPNE9-204ENST00000491802 RIMBP2O15034 1052 aa29.15■■■□□ 2.26
CPNE9-204ENST00000491802 DZIP1LQ8IYY4 767 aaKnown RBP29.15■■■□□ 2.26
CPNE9-204ENST00000491802 GNAI3P08754 354 aa29.14■■■□□ 2.26
CPNE9-204ENST00000491802 ATP2B4P23634 1241 aa29.14■■■□□ 2.26
CPNE9-204ENST00000491802 LRRFIP2Q9Y608 721 aaKnown RBP29.14■■■□□ 2.26
CPNE9-204ENST00000491802 RLBP1P12271 317 aa29.13■■■□□ 2.25
CPNE9-204ENST00000491802 CHRNDQ07001 517 aa29.13■■■□□ 2.25
CPNE9-204ENST00000491802 ANKRD2Q9GZV1 360 aa29.13■■■□□ 2.25
CPNE9-204ENST00000491802 HDAC5Q9UQL6 1122 aa29.13■■■□□ 2.25
CPNE9-204ENST00000491802 FSTL1Q12841 308 aa29.12■■■□□ 2.25
CPNE9-204ENST00000491802 LDHAL6AQ6ZMR3 332 aa29.12■■■□□ 2.25
CPNE9-204ENST00000491802 CNNM1Q9NRU3 951 aa29.12■■■□□ 2.25
CPNE9-204ENST00000491802 PSME4Q14997 1843 aa29.11■■■□□ 2.25
CPNE9-204ENST00000491802 CXCL9Q07325 125 aa29.11■■■□□ 2.25
CPNE9-204ENST00000491802 ZC3H12CQ9C0D7 883 aaKnown RBP29.11■■■□□ 2.25
CPNE9-204ENST00000491802 ITPRIPQ8IWB1 547 aa29.1■■■□□ 2.25
CPNE9-204ENST00000491802 DBNDD1Q9H9R9 158 aa29.1■■■□□ 2.25
CPNE9-204ENST00000491802 LEMD3Q9Y2U8 911 aa29.1■■■□□ 2.25
CPNE9-204ENST00000491802 MED23Q9ULK4 1368 aa29.1■■■□□ 2.25
CPNE9-204ENST00000491802 ADAMTSL1Q8N6G6 1762 aa29.09■■■□□ 2.25
CPNE9-204ENST00000491802 WTIPA6NIX2 430 aaPredicted RBP29.09■■■□□ 2.25
CPNE9-204ENST00000491802 YDJCA8MPS7 323 aa29.09■■■□□ 2.25
CPNE9-204ENST00000491802 TAF1DQ9H5J8 278 aaPredicted RBP29.09■■■□□ 2.25
CPNE9-204ENST00000491802 HACL1Q9UJ83 578 aa29.09■■■□□ 2.25
CPNE9-204ENST00000491802 GJA3Q9Y6H8 435 aa29.09■■■□□ 2.25
CPNE9-204ENST00000491802 TNIP1Q15025 636 aa29.08■■■□□ 2.25
CPNE9-204ENST00000491802 DOK7Q18PE1 504 aa29.08■■■□□ 2.25
CPNE9-204ENST00000491802 SMC1BQ8NDV3 1235 aa29.08■■■□□ 2.25
CPNE9-204ENST00000491802 ZNF804BA4D1E1 1349 aa29.07■■■□□ 2.24
CPNE9-204ENST00000491802 ECE2O60344 883 aa29.07■■■□□ 2.24
CPNE9-204ENST00000491802 KCNJ4P48050 445 aa29.07■■■□□ 2.24
CPNE9-204ENST00000491802 SCN9AQ15858 1988 aa29.07■■■□□ 2.24
CPNE9-204ENST00000491802 CIAPIN1Q6FI81 312 aa29.07■■■□□ 2.24
CPNE9-204ENST00000491802 HELBQ8NG08 1087 aaPredicted RBP29.07■■■□□ 2.24
CPNE9-204ENST00000491802 KLHDC4Q8TBB5 520 aa29.07■■■□□ 2.24
CPNE9-204ENST00000491802 PANK1Q8TE04 598 aa29.07■■■□□ 2.24
CPNE9-204ENST00000491802 PUS3Q9BZE2 481 aaKnown RBP29.07■■■□□ 2.24
CPNE9-204ENST00000491802 TAF5LO75529 589 aa29.06■■■□□ 2.24
CPNE9-204ENST00000491802 SCNN1DP51172 638 aa29.06■■■□□ 2.24
CPNE9-204ENST00000491802 G3V3G9 751 aa29.05■■■□□ 2.24
CPNE9-204ENST00000491802 PLIN1O60240 522 aa29.05■■■□□ 2.24
CPNE9-204ENST00000491802 RAD17O75943 681 aa29.05■■■□□ 2.24
CPNE9-204ENST00000491802 GNAI2P04899 355 aa29.05■■■□□ 2.24
CPNE9-204ENST00000491802 RFX5P48382 616 aaPredicted RBP29.05■■■□□ 2.24
CPNE9-204ENST00000491802 DCAF8Q5TAQ9 597 aa29.05■■■□□ 2.24
CPNE9-204ENST00000491802 ZNF609O15014 1411 aa29.04■■■□□ 2.24
CPNE9-204ENST00000491802 MS4A1P11836 297 aa29.04■■■□□ 2.24
CPNE9-204ENST00000491802 HSPA6P17066 643 aa29.04■■■□□ 2.24
CPNE9-204ENST00000491802 PNMA8AQ86V59 439 aaPredicted RBP29.04■■■□□ 2.24
CPNE9-204ENST00000491802 SNAP23O00161 211 aa29.03■■■□□ 2.24
CPNE9-204ENST00000491802 KLRK1P26718 216 aa29.03■■■□□ 2.24
CPNE9-204ENST00000491802 LMOD1P29536 600 aaPredicted RBP29.03■■■□□ 2.24
CPNE9-204ENST00000491802 EPHX2P34913 555 aa29.03■■■□□ 2.24
CPNE9-204ENST00000491802 LRRC24Q50LG9 513 aa29.03■■■□□ 2.24
CPNE9-204ENST00000491802 RIPOR2Q9Y4F9 1068 aa29.03■■■□□ 2.24
CPNE9-204ENST00000491802 MROH5Q6ZUA9 1318 aa29.02■■■□□ 2.24
CPNE9-204ENST00000491802 PODNQ7Z5L7 613 aa29.02■■■□□ 2.24
CPNE9-204ENST00000491802 GPRC5DQ9NZD1 345 aa29.02■■■□□ 2.24
CPNE9-204ENST00000491802 PTPN12Q05209 780 aaKnown RBP29.01■■■□□ 2.23
CPNE9-204ENST00000491802 C15orf52Q6ZUT6 534 aaKnown RBP29.01■■■□□ 2.23
CPNE9-204ENST00000491802 LDHDQ86WU2 507 aa29.01■■■□□ 2.23
CPNE9-204ENST00000491802 ZNF646O15015 1829 aaPredicted RBP29■■■□□ 2.23
CPNE9-204ENST00000491802 METTL24Q5JXM2 366 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms