RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 GRM8O00222 908 aa22.19■■□□□ 1.14
SMARCD3-214ENST00000491651 IGHMBP2P38935 993 aaKnown RBP22.19■■□□□ 1.14
SMARCD3-214ENST00000491651 TNIP1Q15025 636 aa22.19■■□□□ 1.14
SMARCD3-214ENST00000491651 CIAPIN1Q6FI81 312 aa22.19■■□□□ 1.14
SMARCD3-214ENST00000491651 BSDC1Q9NW68 430 aaPredicted RBP22.19■■□□□ 1.14
SMARCD3-214ENST00000491651 CSF1RP07333 972 aa22.18■■□□□ 1.14
SMARCD3-214ENST00000491651 SCNN1DP51172 638 aa22.18■■□□□ 1.14
SMARCD3-214ENST00000491651 CXCL9Q07325 125 aa22.18■■□□□ 1.14
SMARCD3-214ENST00000491651 FAM161AQ3B820 660 aa22.18■■□□□ 1.14
SMARCD3-214ENST00000491651 EAPPQ56P03 285 aaPredicted RBP22.18■■□□□ 1.14
SMARCD3-214ENST00000491651 C9orf78Q9NZ63 289 aaPredicted RBP22.18■■□□□ 1.14
SMARCD3-214ENST00000491651 ITGA6P23229 1130 aa22.17■■□□□ 1.14
SMARCD3-214ENST00000491651 ZC3H12CQ9C0D7 883 aaKnown RBP22.17■■□□□ 1.14
SMARCD3-214ENST00000491651 TRPM7Q96QT4 1865 aa22.17■■□□□ 1.14
SMARCD3-214ENST00000491651 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
SMARCD3-214ENST00000491651 POTEIP0CG38 1075 aa22.16■■□□□ 1.14
SMARCD3-214ENST00000491651 POTEJP0CG39 1038 aa22.16■■□□□ 1.14
SMARCD3-214ENST00000491651 ATP2B4P23634 1241 aa22.16■■□□□ 1.14
SMARCD3-214ENST00000491651 BCL2L13Q9BXK5 485 aa22.16■■□□□ 1.14
SMARCD3-214ENST00000491651 DBNDD1Q9H9R9 158 aa22.16■■□□□ 1.14
SMARCD3-214ENST00000491651 SMC4Q9NTJ3 1288 aa22.16■■□□□ 1.14
SMARCD3-214ENST00000491651 ANKRD18BA2A2Z9 1011 aa22.15■■□□□ 1.14
SMARCD3-214ENST00000491651 YDJCA8MPS7 323 aa22.15■■□□□ 1.14
SMARCD3-214ENST00000491651 RAD17O75943 681 aa22.15■■□□□ 1.14
SMARCD3-214ENST00000491651 MPHOSPH8Q99549 860 aa22.15■■□□□ 1.14
SMARCD3-214ENST00000491651 G3V3G9 751 aa22.14■■□□□ 1.13
SMARCD3-214ENST00000491651 ECE2O60344 883 aa22.14■■□□□ 1.13
SMARCD3-214ENST00000491651 DCAF8Q5TAQ9 597 aa22.14■■□□□ 1.13
SMARCD3-214ENST00000491651 GPR101Q96P66 508 aaPredicted RBP22.14■■□□□ 1.13
SMARCD3-214ENST00000491651 GPRC5DQ9NZD1 345 aa22.14■■□□□ 1.13
SMARCD3-214ENST00000491651 CLEC11AQ9Y240 323 aa22.14■■□□□ 1.13
SMARCD3-214ENST00000491651 FOXO4P98177 505 aa22.13■■□□□ 1.13
SMARCD3-214ENST00000491651 IFIT5Q13325 482 aaKnown RBP22.13■■□□□ 1.13
SMARCD3-214ENST00000491651 MINPP1Q9UNW1 487 aa22.13■■□□□ 1.13
SMARCD3-214ENST00000491651 CHMP3Q9Y3E7 222 aa22.13■■□□□ 1.13
SMARCD3-214ENST00000491651 MED23Q9ULK4 1368 aa22.12■■□□□ 1.13
SMARCD3-214ENST00000491651 EPS15P42566 896 aa22.12■■□□□ 1.13
SMARCD3-214ENST00000491651 GMPSP49915 693 aaPredicted RBP22.12■■□□□ 1.13
SMARCD3-214ENST00000491651 USP50Q70EL3 339 aaPredicted RBP22.12■■□□□ 1.13
SMARCD3-214ENST00000491651 ANKRD2Q9GZV1 360 aa22.12■■□□□ 1.13
SMARCD3-214ENST00000491651 ADARB2Q9NS39 739 aaKnown RBP22.12■■□□□ 1.13
SMARCD3-214ENST00000491651 UTYO14607 1347 aa22.11■■□□□ 1.13
SMARCD3-214ENST00000491651 ZNF646O15015 1829 aaPredicted RBP22.11■■□□□ 1.13
SMARCD3-214ENST00000491651 DOK7Q18PE1 504 aa22.11■■□□□ 1.13
SMARCD3-214ENST00000491651 POLR2AP24928 1970 aaKnown RBP22.1■■□□□ 1.13
SMARCD3-214ENST00000491651 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
SMARCD3-214ENST00000491651 BRPF1P55201 1214 aaPredicted RBP22.1■■□□□ 1.13
SMARCD3-214ENST00000491651 HNRNPUQ00839 825 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMARCD3-214ENST00000491651 LMBR1LQ6UX01 489 aa22.1■■□□□ 1.13
SMARCD3-214ENST00000491651 LEMD3Q9Y2U8 911 aa22.1■■□□□ 1.13
SMARCD3-214ENST00000491651 PSMD14O00487 310 aa22.09■■□□□ 1.13
SMARCD3-214ENST00000491651 RPS12P25398 132 aaKnown RBP22.09■■□□□ 1.13
SMARCD3-214ENST00000491651 CCDC57Q2TAC2 916 aa22.09■■□□□ 1.13
SMARCD3-214ENST00000491651 EPHA10Q5JZY3 1008 aa22.09■■□□□ 1.13
SMARCD3-214ENST00000491651 KIF16BQ96L93 1317 aa22.08■■□□□ 1.13
SMARCD3-214ENST00000491651 PASKQ96RG2 1323 aa22.08■■□□□ 1.13
SMARCD3-214ENST00000491651 ZNF609O15014 1411 aa22.08■■□□□ 1.13
SMARCD3-214ENST00000491651 HTRA3P83110 453 aa22.08■■□□□ 1.13
SMARCD3-214ENST00000491651 TAF7LQ5H9L4 462 aa22.08■■□□□ 1.13
SMARCD3-214ENST00000491651 DPF2Q92785 391 aa22.08■■□□□ 1.13
SMARCD3-214ENST00000491651 SUCLG2Q96I99 432 aa22.08■■□□□ 1.13
SMARCD3-214ENST00000491651 NBPF7P0C2Y1 421 aaPredicted RBP22.07■■□□□ 1.12
SMARCD3-214ENST00000491651 API5Q9BZZ5 524 aaKnown RBP22.07■■□□□ 1.12
SMARCD3-214ENST00000491651 H7C1D1 291 aa22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 KCNJ4P48050 445 aa22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 RARSP54136 660 aaKnown RBP22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 CHRNDQ07001 517 aa22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 MAP1SQ66K74 1059 aaPredicted RBP22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 PODNQ7Z5L7 613 aa22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 CNTROBQ8N137 903 aa22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 DNAJC5GQ8N7S2 189 aa22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 CNOT7Q9UIV1 285 aaKnown RBP22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 ZNF804BA4D1E1 1349 aa22.06■■□□□ 1.12
SMARCD3-214ENST00000491651 ITGBL1O95965 494 aaPredicted RBP22.05■■□□□ 1.12
SMARCD3-214ENST00000491651 MICALL2Q8IY33 904 aa22.05■■□□□ 1.12
SMARCD3-214ENST00000491651 KLRG1Q96E93 195 aa22.05■■□□□ 1.12
SMARCD3-214ENST00000491651 CREBZFQ9NS37 354 aa22.05■■□□□ 1.12
SMARCD3-214ENST00000491651 NOB1Q9ULX3 412 aaKnown RBP22.05■■□□□ 1.12
SMARCD3-214ENST00000491651 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
SMARCD3-214ENST00000491651 VIL1P09327 827 aaKnown RBP22.04■■□□□ 1.12
SMARCD3-214ENST00000491651 RABL6Q3YEC7 729 aaPredicted RBP22.03■■□□□ 1.12
SMARCD3-214ENST00000491651 LDHAL6AQ6ZMR3 332 aa22.03■■□□□ 1.12
SMARCD3-214ENST00000491651 KAZALD1Q96I82 304 aa22.03■■□□□ 1.12
SMARCD3-214ENST00000491651 COA1Q9GZY4 146 aa22.03■■□□□ 1.12
SMARCD3-214ENST00000491651 BICC1Q9H694 974 aaKnown RBP22.03■■□□□ 1.12
SMARCD3-214ENST00000491651 KCNQ5Q9NR82 932 aa22.03■■□□□ 1.12
SMARCD3-214ENST00000491651 CNNM1Q9NRU3 951 aa22.03■■□□□ 1.12
SMARCD3-214ENST00000491651 ZC3H15Q8WU90 426 aaKnown RBP22.02■■□□□ 1.12
SMARCD3-214ENST00000491651 USP44Q9H0E7 712 aa22.02■■□□□ 1.12
SMARCD3-214ENST00000491651 RSBN1LQ6PCB5 846 aaPredicted RBP22.01■■□□□ 1.11
SMARCD3-214ENST00000491651 AGBL3Q8NEM8 1001 aa22.01■■□□□ 1.11
SMARCD3-214ENST00000491651 ARHGAP45Q92619 1136 aa22.01■■□□□ 1.11
SMARCD3-214ENST00000491651 ZNF594Q96JF6 807 aaPredicted RBP22.01■■□□□ 1.11
SMARCD3-214ENST00000491651 ZBED9Q6R2W3 1325 aa22.01■■□□□ 1.11
SMARCD3-214ENST00000491651 USP17L3A6NCW0 530 aa22■■□□□ 1.11
SMARCD3-214ENST00000491651 USP17L4A6NCW7 530 aa22■■□□□ 1.11
SMARCD3-214ENST00000491651 WTIPA6NIX2 430 aaPredicted RBP22■■□□□ 1.11
SMARCD3-214ENST00000491651 TMEM88BA6NKF7 163 aa22■■□□□ 1.11
SMARCD3-214ENST00000491651 USP17L1Q7RTZ2 530 aa22■■□□□ 1.11
SMARCD3-214ENST00000491651 TRPM4Q8TD43 1214 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms