RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 PSME4Q14997 1843 aa26.88■■□□□ 1.89
CLIP2-208ENST00000491075 FAM155AB1AL88 458 aaPredicted RBP26.87■■□□□ 1.89
CLIP2-208ENST00000491075 TRIM28Q13263 835 aaKnown RBP26.87■■□□□ 1.89
CLIP2-208ENST00000491075 TBC1D16Q8TBP0 767 aa26.87■■□□□ 1.89
CLIP2-208ENST00000491075 CCDC102AQ96A19 550 aa26.87■■□□□ 1.89
CLIP2-208ENST00000491075 SAGE1Q9NXZ1 904 aa26.87■■□□□ 1.89
CLIP2-208ENST00000491075 TNRC18O15417 2968 aaPredicted RBP26.87■■□□□ 1.89
CLIP2-208ENST00000491075 ADM5C9JUS6 153 aa26.86■■□□□ 1.89
CLIP2-208ENST00000491075 IRS4O14654 1257 aaPredicted RBP26.86■■□□□ 1.89
CLIP2-208ENST00000491075 RPS8P62241 208 aaKnown RBP26.86■■□□□ 1.89
CLIP2-208ENST00000491075 DOK7Q18PE1 504 aa26.86■■□□□ 1.89
CLIP2-208ENST00000491075 KIF4BQ2VIQ3 1234 aa26.86■■□□□ 1.89
CLIP2-208ENST00000491075 RTL5Q5HYW3 569 aaPredicted RBP26.86■■□□□ 1.89
CLIP2-208ENST00000491075 RUNDC1Q96C34 613 aa26.86■■□□□ 1.89
CLIP2-208ENST00000491075 RBM26Q5T8P6 1007 aaKnown RBP26.85■■□□□ 1.89
CLIP2-208ENST00000491075 KCNQ5Q9NR82 932 aa26.85■■□□□ 1.89
CLIP2-208ENST00000491075 MYBBP1AQ9BQG0 1328 aaKnown RBP26.85■■□□□ 1.89
CLIP2-208ENST00000491075 ZNF609O15014 1411 aa26.84■■□□□ 1.89
CLIP2-208ENST00000491075 HSP90B1P14625 803 aaKnown RBP26.84■■□□□ 1.89
CLIP2-208ENST00000491075 ZC3H12CQ9C0D7 883 aaKnown RBP26.84■■□□□ 1.89
CLIP2-208ENST00000491075 PODXL2Q9NZ53 605 aa26.84■■□□□ 1.89
CLIP2-208ENST00000491075 VIL1P09327 827 aaKnown RBP26.83■■□□□ 1.89
CLIP2-208ENST00000491075 ZNF157P51786 506 aaPredicted RBP26.83■■□□□ 1.89
CLIP2-208ENST00000491075 SULF1Q8IWU6 871 aa26.83■■□□□ 1.89
CLIP2-208ENST00000491075 GGA3Q9NZ52 723 aa26.83■■□□□ 1.89
CLIP2-208ENST00000491075 WDR43Q15061 677 aaKnown RBP eCLIP26.82■■□□□ 1.88
CLIP2-208ENST00000491075 DUSP27Q5VZP5 1158 aa26.82■■□□□ 1.88
CLIP2-208ENST00000491075 KIF23Q02241 960 aaPredicted RBP26.81■■□□□ 1.88
CLIP2-208ENST00000491075 ZBTB38Q8NAP3 1195 aaPredicted RBP26.81■■□□□ 1.88
CLIP2-208ENST00000491075 G3V3G9 751 aa26.8■■□□□ 1.88
CLIP2-208ENST00000491075 UFL1O94874 794 aa26.8■■□□□ 1.88
CLIP2-208ENST00000491075 SLC10A3P09131 477 aa26.8■■□□□ 1.88
CLIP2-208ENST00000491075 GOLGA2Q08379 1002 aa26.8■■□□□ 1.88
CLIP2-208ENST00000491075 DCAF8Q5TAQ9 597 aa26.8■■□□□ 1.88
CLIP2-208ENST00000491075 RIC3Q7Z5B4 369 aa26.8■■□□□ 1.88
CLIP2-208ENST00000491075 ANKIB1Q9P2G1 1089 aa26.8■■□□□ 1.88
CLIP2-208ENST00000491075 GGA1Q9UJY5 639 aa26.79■■□□□ 1.88
CLIP2-208ENST00000491075 SEC31BQ9NQW1 1179 aa26.78■■□□□ 1.88
CLIP2-208ENST00000491075 PAPPA2Q9BXP8 1791 aa26.78■■□□□ 1.88
CLIP2-208ENST00000491075 ZNF280AP59817 542 aaPredicted RBP26.77■■□□□ 1.88
CLIP2-208ENST00000491075 CCDC152Q4G0S7 254 aa26.77■■□□□ 1.88
CLIP2-208ENST00000491075 AGBL3Q8NEM8 1001 aa26.77■■□□□ 1.88
CLIP2-208ENST00000491075 CDCA5Q96FF9 252 aa26.77■■□□□ 1.88
CLIP2-208ENST00000491075 MBIPQ9NS73 344 aa26.77■■□□□ 1.88
CLIP2-208ENST00000491075 RNF186Q9NXI6 227 aa26.77■■□□□ 1.88
CLIP2-208ENST00000491075 ASTN2O75129 1339 aaPredicted RBP26.76■■□□□ 1.87
CLIP2-208ENST00000491075 TRPA1O75762 1119 aa26.76■■□□□ 1.87
CLIP2-208ENST00000491075 RSBN1LQ6PCB5 846 aaPredicted RBP26.76■■□□□ 1.87
CLIP2-208ENST00000491075 REM2Q8IYK8 340 aaPredicted RBP26.75■■□□□ 1.87
CLIP2-208ENST00000491075 CCDC191Q8NCU4 936 aa26.75■■□□□ 1.87
CLIP2-208ENST00000491075 PDE8AO60658 829 aa26.74■■□□□ 1.87
CLIP2-208ENST00000491075 PCCAP05165 728 aaPredicted RBP26.74■■□□□ 1.87
CLIP2-208ENST00000491075 ANGEL2Q5VTE6 544 aaKnown RBP26.74■■□□□ 1.87
CLIP2-208ENST00000491075 MYD88Q99836 296 aa26.74■■□□□ 1.87
CLIP2-208ENST00000491075 ADAMTS8Q9UP79 889 aa26.74■■□□□ 1.87
CLIP2-208ENST00000491075 MYH3P11055 1940 aa26.73■■□□□ 1.87
CLIP2-208ENST00000491075 XDHP47989 1333 aa26.73■■□□□ 1.87
CLIP2-208ENST00000491075 PITPNM2Q9BZ72 1349 aa26.73■■□□□ 1.87
CLIP2-208ENST00000491075 FKBP1BP68106 108 aa26.73■■□□□ 1.87
CLIP2-208ENST00000491075 SCARF1Q14162 830 aa26.73■■□□□ 1.87
CLIP2-208ENST00000491075 CSRNP1Q96S65 589 aa26.73■■□□□ 1.87
CLIP2-208ENST00000491075 PHAXQ9H814 394 aaKnown RBP26.73■■□□□ 1.87
CLIP2-208ENST00000491075 PDE4DIPQ5VU43 2346 aa26.72■■□□□ 1.87
CLIP2-208ENST00000491075 ZNF853P0CG23 659 aa26.72■■□□□ 1.87
CLIP2-208ENST00000491075 RASAL3Q86YV0 1011 aa26.72■■□□□ 1.87
CLIP2-208ENST00000491075 GMLQ99445 158 aa26.71■■□□□ 1.87
CLIP2-208ENST00000491075 CWC25Q9NXE8 425 aaPredicted RBP26.71■■□□□ 1.87
CLIP2-208ENST00000491075 SPEF2Q9C093 1822 aa26.71■■□□□ 1.87
CLIP2-208ENST00000491075 USP17L8P0C7I0 530 aa26.7■■□□□ 1.86
CLIP2-208ENST00000491075 ANKRD18AQ8IVF6 992 aa26.7■■□□□ 1.86
CLIP2-208ENST00000491075 MYOZ2Q9NPC6 264 aa26.7■■□□□ 1.86
CLIP2-208ENST00000491075 IFT57Q9NWB7 429 aa26.7■■□□□ 1.86
CLIP2-208ENST00000491075 CALD1Q05682 793 aaKnown RBP26.69■■□□□ 1.86
CLIP2-208ENST00000491075 PODNQ7Z5L7 613 aa26.69■■□□□ 1.86
CLIP2-208ENST00000491075 ZNF646O15015 1829 aaPredicted RBP26.69■■□□□ 1.86
CLIP2-208ENST00000491075 USP17L3A6NCW0 530 aa26.68■■□□□ 1.86
CLIP2-208ENST00000491075 USP17L4A6NCW7 530 aa26.68■■□□□ 1.86
CLIP2-208ENST00000491075 DDX58O95786 925 aaKnown RBP26.68■■□□□ 1.86
CLIP2-208ENST00000491075 ATP2B4P23634 1241 aa26.68■■□□□ 1.86
CLIP2-208ENST00000491075 GNAI1P63096 354 aa26.68■■□□□ 1.86
CLIP2-208ENST00000491075 USP17L1Q7RTZ2 530 aa26.68■■□□□ 1.86
CLIP2-208ENST00000491075 CTU1Q7Z7A3 348 aaKnown RBP26.68■■□□□ 1.86
CLIP2-208ENST00000491075 CCDC85AQ96PX6 553 aaPredicted RBP26.67■■□□□ 1.86
CLIP2-208ENST00000491075 METTL22Q9BUU2 404 aaPredicted RBP26.67■■□□□ 1.86
CLIP2-208ENST00000491075 SOX10P56693 466 aa26.66■■□□□ 1.86
CLIP2-208ENST00000491075 DDX10Q13206 875 aaKnown RBP26.66■■□□□ 1.86
CLIP2-208ENST00000491075 CDC5LQ99459 802 aaKnown RBP26.66■■□□□ 1.86
CLIP2-208ENST00000491075 CHMP4AQ9BY43 222 aa26.66■■□□□ 1.86
CLIP2-208ENST00000491075 MED23Q9ULK4 1368 aa26.66■■□□□ 1.86
CLIP2-208ENST00000491075 ELL2O00472 640 aaPredicted RBP26.65■■□□□ 1.86
CLIP2-208ENST00000491075 CTSWP56202 376 aa26.64■■□□□ 1.86
CLIP2-208ENST00000491075 JARID2Q92833 1246 aaPredicted RBP26.64■■□□□ 1.86
CLIP2-208ENST00000491075 CCDC30Q5VVM6 783 aa26.62■■□□□ 1.85
CLIP2-208ENST00000491075 BSDC1Q9NW68 430 aaPredicted RBP26.61■■□□□ 1.85
CLIP2-208ENST00000491075 PCDH10Q9P2E7 1040 aa26.61■■□□□ 1.85
CLIP2-208ENST00000491075 MAP3K2Q9Y2U5 619 aa26.61■■□□□ 1.85
CLIP2-208ENST00000491075 MYO3BQ8WXR4 1341 aa26.61■■□□□ 1.85
CLIP2-208ENST00000491075 APAF1O14727 1248 aa26.6■■□□□ 1.85
CLIP2-208ENST00000491075 OGFOD1Q8N543 542 aa26.6■■□□□ 1.85
CLIP2-208ENST00000491075 C8orf58Q8NAV2 365 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms