RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
TRAIP-211ENST00000491060 H7C1W4 665 aa17.31■□□□□ 0.36
TRAIP-211ENST00000491060 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
TRAIP-211ENST00000491060 KLRG1Q96E93 195 aa17.31■□□□□ 0.36
TRAIP-211ENST00000491060 GGA1Q9UJY5 639 aa17.31■□□□□ 0.36
TRAIP-211ENST00000491060 ADAMTSL1Q8N6G6 1762 aa17.3■□□□□ 0.36
TRAIP-211ENST00000491060 PSMD14O00487 310 aa17.3■□□□□ 0.36
TRAIP-211ENST00000491060 PNMA8AQ86V59 439 aaPredicted RBP17.3■□□□□ 0.36
TRAIP-211ENST00000491060 CNTROBQ8N137 903 aa17.3■□□□□ 0.36
TRAIP-211ENST00000491060 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
TRAIP-211ENST00000491060 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
TRAIP-211ENST00000491060 EYA3Q99504 573 aa17.3■□□□□ 0.36
TRAIP-211ENST00000491060 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
TRAIP-211ENST00000491060 CEP350Q5VT06 3117 aa17.29■□□□□ 0.36
TRAIP-211ENST00000491060 TRAF5O00463 557 aa17.29■□□□□ 0.36
TRAIP-211ENST00000491060 ITGA6P23229 1130 aa17.29■□□□□ 0.36
TRAIP-211ENST00000491060 GPRC5DQ9NZD1 345 aa17.29■□□□□ 0.36
TRAIP-211ENST00000491060 IGHMBP2P38935 993 aaKnown RBP17.28■□□□□ 0.36
TRAIP-211ENST00000491060 GRM1Q13255 1194 aa17.28■□□□□ 0.36
TRAIP-211ENST00000491060 TNIP1Q15025 636 aa17.28■□□□□ 0.36
TRAIP-211ENST00000491060 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
TRAIP-211ENST00000491060 MIER1Q8N108 512 aa17.28■□□□□ 0.36
TRAIP-211ENST00000491060 TRPM4Q8TD43 1214 aa17.28■□□□□ 0.36
TRAIP-211ENST00000491060 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
TRAIP-211ENST00000491060 E9PSI1 815 aa17.27■□□□□ 0.36
TRAIP-211ENST00000491060 CASP7P55210 303 aa17.27■□□□□ 0.36
TRAIP-211ENST00000491060 SLFN5Q08AF3 891 aa17.27■□□□□ 0.36
TRAIP-211ENST00000491060 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.36
TRAIP-211ENST00000491060 MICALL2Q8IY33 904 aa17.27■□□□□ 0.36
TRAIP-211ENST00000491060 MRPL50Q8N5N7 158 aaKnown RBP17.27■□□□□ 0.36
TRAIP-211ENST00000491060 HELBQ8NG08 1087 aaPredicted RBP17.27■□□□□ 0.36
TRAIP-211ENST00000491060 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.36
TRAIP-211ENST00000491060 VPS33BQ9H267 617 aa17.27■□□□□ 0.36
TRAIP-211ENST00000491060 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.36
TRAIP-211ENST00000491060 C9orf78Q9NZ63 289 aaPredicted RBP17.27■□□□□ 0.36
TRAIP-211ENST00000491060 CNOT7Q9UIV1 285 aaKnown RBP17.27■□□□□ 0.36
TRAIP-211ENST00000491060 XDHP47989 1333 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 PLIN1O60240 522 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
TRAIP-211ENST00000491060 EPHA10Q5JZY3 1008 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 DLK2Q6UY11 383 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
TRAIP-211ENST00000491060 SAMD7Q7Z3H4 446 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 ADARB2Q9NS39 739 aaKnown RBP17.26■□□□□ 0.35
TRAIP-211ENST00000491060 ABT1Q9ULW3 272 aaKnown RBP17.26■□□□□ 0.35
TRAIP-211ENST00000491060 MINPP1Q9UNW1 487 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 RTL9Q8NET4 1388 aa17.26■□□□□ 0.35
TRAIP-211ENST00000491060 PASKQ96RG2 1323 aa17.25■□□□□ 0.35
TRAIP-211ENST00000491060 TRPM7Q96QT4 1865 aa17.25■□□□□ 0.35
TRAIP-211ENST00000491060 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
TRAIP-211ENST00000491060 SNAP23O00161 211 aa17.25■□□□□ 0.35
TRAIP-211ENST00000491060 KLRK1P26718 216 aa17.25■□□□□ 0.35
TRAIP-211ENST00000491060 DIEXFQ68CQ4 756 aaKnown RBP17.25■□□□□ 0.35
TRAIP-211ENST00000491060 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
TRAIP-211ENST00000491060 GLIS2Q9BZE0 524 aaPredicted RBP17.25■□□□□ 0.35
TRAIP-211ENST00000491060 SRCIN1Q9C0H9 1055 aa17.25■□□□□ 0.35
TRAIP-211ENST00000491060 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 TAF5LO75529 589 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 ATP2B4P23634 1241 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 KCNJ4P48050 445 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 HIRAP54198 1017 aaPredicted RBP17.24■□□□□ 0.35
TRAIP-211ENST00000491060 FOXO4P98177 505 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 LMBR1LQ6UX01 489 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
TRAIP-211ENST00000491060 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 A0A1B0GUL6 1792 aa17.24■□□□□ 0.35
TRAIP-211ENST00000491060 TMEM88BA6NKF7 163 aa17.23■□□□□ 0.35
TRAIP-211ENST00000491060 H7C1D1 291 aa17.23■□□□□ 0.35
TRAIP-211ENST00000491060 GRM8O00222 908 aa17.23■□□□□ 0.35
TRAIP-211ENST00000491060 EGFRP00533 1210 aa17.23■□□□□ 0.35
TRAIP-211ENST00000491060 CCT4P50991 539 aaKnown RBP17.23■□□□□ 0.35
TRAIP-211ENST00000491060 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
TRAIP-211ENST00000491060 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
TRAIP-211ENST00000491060 BSDC1Q9NW68 430 aaPredicted RBP17.23■□□□□ 0.35
TRAIP-211ENST00000491060 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
TRAIP-211ENST00000491060 TXNRD3Q86VQ6 643 aa17.22■□□□□ 0.35
TRAIP-211ENST00000491060 PLA2G12BQ9BX93 195 aa17.22■□□□□ 0.35
TRAIP-211ENST00000491060 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
TRAIP-211ENST00000491060 PSME4Q14997 1843 aa17.21■□□□□ 0.35
TRAIP-211ENST00000491060 CSF1RP07333 972 aa17.21■□□□□ 0.35
TRAIP-211ENST00000491060 CHRNDQ07001 517 aa17.21■□□□□ 0.35
TRAIP-211ENST00000491060 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
TRAIP-211ENST00000491060 JAG2Q9Y219 1238 aa17.21■□□□□ 0.35
TRAIP-211ENST00000491060 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.34
TRAIP-211ENST00000491060 NBPF7P0C2Y1 421 aaPredicted RBP17.2■□□□□ 0.34
TRAIP-211ENST00000491060 CNNM1Q9NRU3 951 aa17.2■□□□□ 0.34
TRAIP-211ENST00000491060 ZNF804BA4D1E1 1349 aa17.2■□□□□ 0.34
TRAIP-211ENST00000491060 ALDH1L1O75891 902 aa17.19■□□□□ 0.34
TRAIP-211ENST00000491060 CELF2O95319 508 aaKnown RBP17.19■□□□□ 0.34
TRAIP-211ENST00000491060 VEGFBP49765 207 aa17.19■□□□□ 0.34
TRAIP-211ENST00000491060 CCDC57Q2TAC2 916 aa17.19■□□□□ 0.34
TRAIP-211ENST00000491060 ADM5C9JUS6 153 aa17.18■□□□□ 0.34
TRAIP-211ENST00000491060 HSPA1AP0DMV8 641 aaKnown RBP17.18■□□□□ 0.34
TRAIP-211ENST00000491060 HSPA1BP0DMV9 641 aaKnown RBP17.18■□□□□ 0.34
TRAIP-211ENST00000491060 PUS3Q9BZE2 481 aaKnown RBP17.18■□□□□ 0.34
TRAIP-211ENST00000491060 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms