RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 RABL6Q3YEC7 729 aaPredicted RBP16.09■□□□□ 0.17
LIMK1-207ENST00000491052 ANKRD44Q8N8A2 993 aa16.09■□□□□ 0.17
LIMK1-207ENST00000491052 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
LIMK1-207ENST00000491052 BSDC1Q9NW68 430 aaPredicted RBP16.09■□□□□ 0.17
LIMK1-207ENST00000491052 HDAC5Q9UQL6 1122 aa16.09■□□□□ 0.17
LIMK1-207ENST00000491052 LRRFIP2Q9Y608 721 aaKnown RBP16.09■□□□□ 0.17
LIMK1-207ENST00000491052 XDHP47989 1333 aa16.09■□□□□ 0.17
LIMK1-207ENST00000491052 SCN9AQ15858 1988 aa16.09■□□□□ 0.17
LIMK1-207ENST00000491052 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.16
LIMK1-207ENST00000491052 UFL1O94874 794 aa16.08■□□□□ 0.16
LIMK1-207ENST00000491052 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
LIMK1-207ENST00000491052 JDP2Q8WYK2 163 aa16.08■□□□□ 0.16
LIMK1-207ENST00000491052 RTFDC1Q9BY42 306 aaPredicted RBP16.08■□□□□ 0.16
LIMK1-207ENST00000491052 PLIN1O60240 522 aa16.07■□□□□ 0.16
LIMK1-207ENST00000491052 MS4A1P11836 297 aa16.07■□□□□ 0.16
LIMK1-207ENST00000491052 NIM1KQ8IY84 436 aa16.07■□□□□ 0.16
LIMK1-207ENST00000491052 GPR101Q96P66 508 aaPredicted RBP16.07■□□□□ 0.16
LIMK1-207ENST00000491052 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
LIMK1-207ENST00000491052 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
LIMK1-207ENST00000491052 GGA1Q9UJY5 639 aa16.07■□□□□ 0.16
LIMK1-207ENST00000491052 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
LIMK1-207ENST00000491052 SCN4AP35499 1836 aa16.07■□□□□ 0.16
LIMK1-207ENST00000491052 WDR90Q96KV7 1748 aa16.06■□□□□ 0.16
LIMK1-207ENST00000491052 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
LIMK1-207ENST00000491052 RIMBP2O15034 1052 aa16.06■□□□□ 0.16
LIMK1-207ENST00000491052 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
LIMK1-207ENST00000491052 TBC1D16Q8TBP0 767 aa16.06■□□□□ 0.16
LIMK1-207ENST00000491052 EYA3Q99504 573 aa16.06■□□□□ 0.16
LIMK1-207ENST00000491052 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
LIMK1-207ENST00000491052 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
LIMK1-207ENST00000491052 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
LIMK1-207ENST00000491052 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
LIMK1-207ENST00000491052 LDHAL6AQ6ZMR3 332 aa16.05■□□□□ 0.16
LIMK1-207ENST00000491052 ANKRD2Q9GZV1 360 aa16.05■□□□□ 0.16
LIMK1-207ENST00000491052 VPS33BQ9H267 617 aa16.05■□□□□ 0.16
LIMK1-207ENST00000491052 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
LIMK1-207ENST00000491052 GNAI2P04899 355 aa16.04■□□□□ 0.16
LIMK1-207ENST00000491052 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
LIMK1-207ENST00000491052 KCNJ4P48050 445 aa16.04■□□□□ 0.16
LIMK1-207ENST00000491052 CHRNDQ07001 517 aa16.04■□□□□ 0.16
LIMK1-207ENST00000491052 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
LIMK1-207ENST00000491052 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
LIMK1-207ENST00000491052 EIF6P56537 245 aaKnown RBP16.03■□□□□ 0.16
LIMK1-207ENST00000491052 HELBQ8NG08 1087 aaPredicted RBP16.03■□□□□ 0.16
LIMK1-207ENST00000491052 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
LIMK1-207ENST00000491052 PUS3Q9BZE2 481 aaKnown RBP16.03■□□□□ 0.16
LIMK1-207ENST00000491052 ZNF646O15015 1829 aaPredicted RBP16.03■□□□□ 0.16
LIMK1-207ENST00000491052 G3V3G9 751 aa16.02■□□□□ 0.16
LIMK1-207ENST00000491052 FZD9O00144 591 aa16.02■□□□□ 0.16
LIMK1-207ENST00000491052 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
LIMK1-207ENST00000491052 ZC3H12CQ9C0D7 883 aaKnown RBP16.02■□□□□ 0.16
LIMK1-207ENST00000491052 C1orf115Q9H7X2 142 aa16.02■□□□□ 0.16
LIMK1-207ENST00000491052 NMRK2Q9NPI5 230 aa16.02■□□□□ 0.16
LIMK1-207ENST00000491052 COG6Q9Y2V7 657 aa16.02■□□□□ 0.16
LIMK1-207ENST00000491052 MED23Q9ULK4 1368 aa16.01■□□□□ 0.15
LIMK1-207ENST00000491052 ZNF804BA4D1E1 1349 aa16.01■□□□□ 0.15
LIMK1-207ENST00000491052 WTIPA6NIX2 430 aaPredicted RBP16.01■□□□□ 0.15
LIMK1-207ENST00000491052 TAF5LO75529 589 aa16.01■□□□□ 0.15
LIMK1-207ENST00000491052 DDNO94850 711 aaPredicted RBP16.01■□□□□ 0.15
LIMK1-207ENST00000491052 MVPQ14764 893 aaKnown RBP16.01■□□□□ 0.15
LIMK1-207ENST00000491052 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
LIMK1-207ENST00000491052 DBNDD1Q9H9R9 158 aa16.01■□□□□ 0.15
LIMK1-207ENST00000491052 ZNRF3Q9ULT6 936 aa16.01■□□□□ 0.15
LIMK1-207ENST00000491052 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
LIMK1-207ENST00000491052 GJA3Q9Y6H8 435 aa16.01■□□□□ 0.15
LIMK1-207ENST00000491052 ARAP2Q8WZ64 1704 aa16■□□□□ 0.15
LIMK1-207ENST00000491052 SRGAP3O43295 1099 aa16■□□□□ 0.15
LIMK1-207ENST00000491052 RFX5P48382 616 aaPredicted RBP16■□□□□ 0.15
LIMK1-207ENST00000491052 LRRC24Q50LG9 513 aa16■□□□□ 0.15
LIMK1-207ENST00000491052 SIL1Q9H173 461 aa16■□□□□ 0.15
LIMK1-207ENST00000491052 MROH5Q6ZUA9 1318 aa15.99■□□□□ 0.15
LIMK1-207ENST00000491052 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
LIMK1-207ENST00000491052 ECE2O60344 883 aa15.99■□□□□ 0.15
LIMK1-207ENST00000491052 PTPN12Q05209 780 aaKnown RBP15.99■□□□□ 0.15
LIMK1-207ENST00000491052 PDE3AQ14432 1141 aa15.99■□□□□ 0.15
LIMK1-207ENST00000491052 METTL24Q5JXM2 366 aa15.99■□□□□ 0.15
LIMK1-207ENST00000491052 C20orf194Q5TEA3 1177 aa15.99■□□□□ 0.15
LIMK1-207ENST00000491052 RRAGCQ9HB90 399 aa15.99■□□□□ 0.15
LIMK1-207ENST00000491052 DDX19BQ9UMR2 479 aa15.99■□□□□ 0.15
LIMK1-207ENST00000491052 RIPOR2Q9Y4F9 1068 aa15.99■□□□□ 0.15
LIMK1-207ENST00000491052 YDJCA8MPS7 323 aa15.98■□□□□ 0.15
LIMK1-207ENST00000491052 SNAP23O00161 211 aa15.98■□□□□ 0.15
LIMK1-207ENST00000491052 EYA2O00167 538 aa15.98■□□□□ 0.15
LIMK1-207ENST00000491052 RAD17O75943 681 aa15.98■□□□□ 0.15
LIMK1-207ENST00000491052 KLRK1P26718 216 aa15.98■□□□□ 0.15
LIMK1-207ENST00000491052 MTX1Q13505 466 aa15.98■□□□□ 0.15
LIMK1-207ENST00000491052 GPC2Q8N158 579 aa15.98■□□□□ 0.15
LIMK1-207ENST00000491052 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
LIMK1-207ENST00000491052 RRP1P56182 461 aaKnown RBP15.97■□□□□ 0.15
LIMK1-207ENST00000491052 CXCL9Q07325 125 aa15.97■□□□□ 0.15
LIMK1-207ENST00000491052 CIAPIN1Q6FI81 312 aa15.97■□□□□ 0.15
LIMK1-207ENST00000491052 PNMA6EA0A0J9YXQ4 647 aa15.96■□□□□ 0.15
LIMK1-207ENST00000491052 TXNRD3Q86VQ6 643 aa15.96■□□□□ 0.15
LIMK1-207ENST00000491052 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
LIMK1-207ENST00000491052 COPRSQ9NQ92 184 aa15.96■□□□□ 0.15
LIMK1-207ENST00000491052 KIF3CO14782 793 aa15.95■□□□□ 0.14
LIMK1-207ENST00000491052 CIAO1O76071 339 aa15.95■□□□□ 0.14
LIMK1-207ENST00000491052 VEGFAP15692 232 aaPredicted RBP15.95■□□□□ 0.14
LIMK1-207ENST00000491052 TNIP1Q15025 636 aa15.95■□□□□ 0.14
LIMK1-207ENST00000491052 L3MBTL3Q96JM7 780 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms