RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 KLHL34Q8N239 644 aa23.04■■□□□ 1.28
MCF2L-230ENST00000491028 KIF1BPQ96EK5 621 aa23.04■■□□□ 1.28
MCF2L-230ENST00000491028 PUS3Q9BZE2 481 aaKnown RBP23.04■■□□□ 1.28
MCF2L-230ENST00000491028 PPP1R1BQ9UD71 204 aaPredicted RBP23.04■■□□□ 1.28
MCF2L-230ENST00000491028 RIPOR2Q9Y4F9 1068 aa23.04■■□□□ 1.28
MCF2L-230ENST00000491028 MROH5Q6ZUA9 1318 aa23.04■■□□□ 1.28
MCF2L-230ENST00000491028 PPEF1O14829 653 aaPredicted RBP23.02■■□□□ 1.28
MCF2L-230ENST00000491028 KCNA3P22001 575 aa23.02■■□□□ 1.28
MCF2L-230ENST00000491028 LRRCC1Q9C099 1032 aa23.02■■□□□ 1.28
MCF2L-230ENST00000491028 SLX4Q8IY92 1834 aa23.01■■□□□ 1.27
MCF2L-230ENST00000491028 A0A0G2JLW4 131 aa23.01■■□□□ 1.27
MCF2L-230ENST00000491028 RHPN1Q8TCX5 695 aa23.01■■□□□ 1.27
MCF2L-230ENST00000491028 SASH1O94885 1247 aa23■■□□□ 1.27
MCF2L-230ENST00000491028 METTL24Q5JXM2 366 aa23■■□□□ 1.27
MCF2L-230ENST00000491028 PRPF40BQ6NWY9 871 aaKnown RBP23■■□□□ 1.27
MCF2L-230ENST00000491028 TTLL6Q8N841 843 aa23■■□□□ 1.27
MCF2L-230ENST00000491028 FHDC1Q9C0D6 1143 aaPredicted RBP23■■□□□ 1.27
MCF2L-230ENST00000491028 ZBTB47Q9UFB7 747 aaPredicted RBP23■■□□□ 1.27
MCF2L-230ENST00000491028 APBB1O00213 710 aa22.99■■□□□ 1.27
MCF2L-230ENST00000491028 SP8Q8IXZ3 490 aa22.99■■□□□ 1.27
MCF2L-230ENST00000491028 ANKRD2Q9GZV1 360 aa22.99■■□□□ 1.27
MCF2L-230ENST00000491028 PIM2Q9P1W9 311 aa22.99■■□□□ 1.27
MCF2L-230ENST00000491028 CEP126Q9P2H0 1117 aa22.99■■□□□ 1.27
MCF2L-230ENST00000491028 MINPP1Q9UNW1 487 aa22.99■■□□□ 1.27
MCF2L-230ENST00000491028 ATP6V0A2Q9Y487 856 aa22.99■■□□□ 1.27
MCF2L-230ENST00000491028 NUCB1Q02818 461 aa22.98■■□□□ 1.27
MCF2L-230ENST00000491028 CHRNDQ07001 517 aa22.98■■□□□ 1.27
MCF2L-230ENST00000491028 TFCP2Q12800 502 aa22.98■■□□□ 1.27
MCF2L-230ENST00000491028 ANKRD45Q5TZF3 282 aa22.98■■□□□ 1.27
MCF2L-230ENST00000491028 VGLL2Q8N8G2 317 aa22.98■■□□□ 1.27
MCF2L-230ENST00000491028 GPR108Q9NPR9 543 aa22.98■■□□□ 1.27
MCF2L-230ENST00000491028 LTBP1Q14766 1721 aa22.98■■□□□ 1.27
MCF2L-230ENST00000491028 ARAP2Q8WZ64 1704 aa22.97■■□□□ 1.27
MCF2L-230ENST00000491028 PDE8BO95263 885 aa22.97■■□□□ 1.27
MCF2L-230ENST00000491028 TMX4Q9H1E5 349 aaPredicted RBP22.97■■□□□ 1.27
MCF2L-230ENST00000491028 ZNF609O15014 1411 aa22.97■■□□□ 1.27
MCF2L-230ENST00000491028 CC2D2BQ6DHV5 1058 aa22.96■■□□□ 1.27
MCF2L-230ENST00000491028 CLASRPQ8N2M8 674 aaKnown RBP22.96■■□□□ 1.27
MCF2L-230ENST00000491028 NLGN2Q8NFZ4 835 aa22.96■■□□□ 1.27
MCF2L-230ENST00000491028 AKAP2Q9Y2D5 859 aa22.96■■□□□ 1.27
MCF2L-230ENST00000491028 ARFGEF1Q9Y6D6 1849 aa22.96■■□□□ 1.27
MCF2L-230ENST00000491028 XDHP47989 1333 aa22.95■■□□□ 1.26
MCF2L-230ENST00000491028 CHD1LQ86WJ1 897 aa22.95■■□□□ 1.26
MCF2L-230ENST00000491028 PUM3Q15397 648 aaKnown RBP22.94■■□□□ 1.26
MCF2L-230ENST00000491028 DALRD3Q5D0E6 543 aaKnown RBP22.94■■□□□ 1.26
MCF2L-230ENST00000491028 C7orf43Q8WVR3 580 aa22.94■■□□□ 1.26
MCF2L-230ENST00000491028 SYT17Q9BSW7 474 aa22.94■■□□□ 1.26
MCF2L-230ENST00000491028 IL1RAPL2Q9NP60 686 aa22.94■■□□□ 1.26
MCF2L-230ENST00000491028 PODXL2Q9NZ53 605 aa22.94■■□□□ 1.26
MCF2L-230ENST00000491028 SMARCA5O60264 1052 aaPredicted RBP22.93■■□□□ 1.26
MCF2L-230ENST00000491028 GRIPAP1Q4V328 841 aa22.93■■□□□ 1.26
MCF2L-230ENST00000491028 TNNI3KQ59H18 835 aa22.93■■□□□ 1.26
MCF2L-230ENST00000491028 SOGA3Q5TF21 947 aa22.93■■□□□ 1.26
MCF2L-230ENST00000491028 FPGT-TNNI3KV9GXZ4 949 aa22.93■■□□□ 1.26
MCF2L-230ENST00000491028 UBE4AQ14139 1066 aa22.92■■□□□ 1.26
MCF2L-230ENST00000491028 ATP2B3Q16720 1220 aa22.92■■□□□ 1.26
MCF2L-230ENST00000491028 HELBQ8NG08 1087 aaPredicted RBP22.92■■□□□ 1.26
MCF2L-230ENST00000491028 LNPKQ9C0E8 428 aa22.92■■□□□ 1.26
MCF2L-230ENST00000491028 ANKIB1Q9P2G1 1089 aa22.92■■□□□ 1.26
MCF2L-230ENST00000491028 LEMD3Q9Y2U8 911 aa22.92■■□□□ 1.26
MCF2L-230ENST00000491028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.92■■□□□ 1.26
MCF2L-230ENST00000491028 SNED1Q8TER0 1413 aa22.91■■□□□ 1.26
MCF2L-230ENST00000491028 TAF5LO75529 589 aa22.91■■□□□ 1.26
MCF2L-230ENST00000491028 FGFR2P21802 821 aa22.91■■□□□ 1.26
MCF2L-230ENST00000491028 GPSM2P81274 684 aa22.91■■□□□ 1.26
MCF2L-230ENST00000491028 LPIN2Q92539 896 aa22.91■■□□□ 1.26
MCF2L-230ENST00000491028 DUOX1Q9NRD9 1551 aa22.91■■□□□ 1.26
MCF2L-230ENST00000491028 A0A1B0GUL7 405 aa22.9■■□□□ 1.26
MCF2L-230ENST00000491028 ATP2B4P23634 1241 aa22.9■■□□□ 1.26
MCF2L-230ENST00000491028 CCDC93Q567U6 631 aa22.9■■□□□ 1.26
MCF2L-230ENST00000491028 AACSQ86V21 672 aa22.9■■□□□ 1.26
MCF2L-230ENST00000491028 MPNDQ8N594 471 aa22.9■■□□□ 1.26
MCF2L-230ENST00000491028 EAF2Q96CJ1 260 aaPredicted RBP22.9■■□□□ 1.26
MCF2L-230ENST00000491028 NSFL1CQ9UNZ2 370 aaKnown RBP22.9■■□□□ 1.26
MCF2L-230ENST00000491028 ZNF804BA4D1E1 1349 aa22.89■■□□□ 1.26
MCF2L-230ENST00000491028 C21orf2O43822 256 aa22.89■■□□□ 1.25
MCF2L-230ENST00000491028 IFIT1P09914 478 aaKnown RBP22.89■■□□□ 1.25
MCF2L-230ENST00000491028 SLC5A1P13866 664 aa22.89■■□□□ 1.25
MCF2L-230ENST00000491028 KCNJ4P48050 445 aa22.89■■□□□ 1.25
MCF2L-230ENST00000491028 SLC51AQ86UW1 340 aa22.89■■□□□ 1.25
MCF2L-230ENST00000491028 GGA1Q9UJY5 639 aa22.89■■□□□ 1.25
MCF2L-230ENST00000491028 IFIT2P09913 472 aaKnown RBP22.88■■□□□ 1.25
MCF2L-230ENST00000491028 DPP8Q6V1X1 898 aaPredicted RBP22.88■■□□□ 1.25
MCF2L-230ENST00000491028 BCS1LQ9Y276 419 aa22.88■■□□□ 1.25
MCF2L-230ENST00000491028 UFL1O94874 794 aa22.87■■□□□ 1.25
MCF2L-230ENST00000491028 OLFM4Q6UX06 510 aa22.87■■□□□ 1.25
MCF2L-230ENST00000491028 RTKN2Q8IZC4 609 aa22.87■■□□□ 1.25
MCF2L-230ENST00000491028 ZNF219Q9P2Y4 722 aaPredicted RBP22.87■■□□□ 1.25
MCF2L-230ENST00000491028 FER1L6Q2WGJ9 1857 aa22.87■■□□□ 1.25
MCF2L-230ENST00000491028 TIMM10P62072 90 aa22.86■■□□□ 1.25
MCF2L-230ENST00000491028 C15orf52Q6ZUT6 534 aaKnown RBP22.86■■□□□ 1.25
MCF2L-230ENST00000491028 TBC1D16Q8TBP0 767 aa22.86■■□□□ 1.25
MCF2L-230ENST00000491028 NEUROD6Q96NK8 337 aa22.86■■□□□ 1.25
MCF2L-230ENST00000491028 RTFDC1Q9BY42 306 aaPredicted RBP22.86■■□□□ 1.25
MCF2L-230ENST00000491028 CCDC8Q9H0W5 538 aaPredicted RBP22.86■■□□□ 1.25
MCF2L-230ENST00000491028 SALL3Q9BXA9 1300 aa22.85■■□□□ 1.25
MCF2L-230ENST00000491028 SUPT20HQ8NEM7 779 aa22.85■■□□□ 1.25
MCF2L-230ENST00000491028 GPATCH3Q96I76 525 aa22.85■■□□□ 1.25
MCF2L-230ENST00000491028 DBNLQ9UJU6 430 aaKnown RBP22.85■■□□□ 1.25
MCF2L-230ENST00000491028 MED23Q9ULK4 1368 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms