RNA–Protein interactions for RNA: ENST00000491013.5

FDPS-216, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5

Gene FDPS, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-216ENST00000491013 SCN9AQ15858 1988 aa18.56■□□□□ 0.56
FDPS-216ENST00000491013 NBPF7P0C2Y1 421 aaPredicted RBP18.56■□□□□ 0.56
FDPS-216ENST00000491013 HSPA6P17066 643 aa18.56■□□□□ 0.56
FDPS-216ENST00000491013 CXCL9Q07325 125 aa18.56■□□□□ 0.56
FDPS-216ENST00000491013 SMC1BQ8NDV3 1235 aa18.56■□□□□ 0.56
FDPS-216ENST00000491013 TAF1DQ9H5J8 278 aaPredicted RBP18.56■□□□□ 0.56
FDPS-216ENST00000491013 HACL1Q9UJ83 578 aa18.56■□□□□ 0.56
FDPS-216ENST00000491013 GGA1Q9UJY5 639 aa18.56■□□□□ 0.56
FDPS-216ENST00000491013 NOB1Q9ULX3 412 aaKnown RBP18.56■□□□□ 0.56
FDPS-216ENST00000491013 GJA3Q9Y6H8 435 aa18.56■□□□□ 0.56
FDPS-216ENST00000491013 PSME4Q14997 1843 aa18.56■□□□□ 0.56
FDPS-216ENST00000491013 ANKRD18BA2A2Z9 1011 aa18.55■□□□□ 0.56
FDPS-216ENST00000491013 RIMBP2O15034 1052 aa18.55■□□□□ 0.56
FDPS-216ENST00000491013 UFL1O94874 794 aa18.55■□□□□ 0.56
FDPS-216ENST00000491013 LMBR1LQ6UX01 489 aa18.55■□□□□ 0.56
FDPS-216ENST00000491013 KAZALD1Q96I82 304 aa18.55■□□□□ 0.56
FDPS-216ENST00000491013 ADAMTSL1Q8N6G6 1762 aa18.55■□□□□ 0.56
FDPS-216ENST00000491013 YDJCA8MPS7 323 aa18.54■□□□□ 0.56
FDPS-216ENST00000491013 ATP2B4P23634 1241 aa18.54■□□□□ 0.56
FDPS-216ENST00000491013 IFIT5Q13325 482 aaKnown RBP18.54■□□□□ 0.56
FDPS-216ENST00000491013 SUCLG2Q96I99 432 aa18.54■□□□□ 0.56
FDPS-216ENST00000491013 GPR101Q96P66 508 aaPredicted RBP18.54■□□□□ 0.56
FDPS-216ENST00000491013 MPHOSPH8Q99549 860 aa18.54■□□□□ 0.56
FDPS-216ENST00000491013 API5Q9BZZ5 524 aaKnown RBP18.54■□□□□ 0.56
FDPS-216ENST00000491013 ZC3H12CQ9C0D7 883 aaKnown RBP18.54■□□□□ 0.56
FDPS-216ENST00000491013 EPHX2P34913 555 aa18.53■□□□□ 0.56
FDPS-216ENST00000491013 SCNN1DP51172 638 aa18.53■□□□□ 0.56
FDPS-216ENST00000491013 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
FDPS-216ENST00000491013 ARHGAP45Q92619 1136 aa18.53■□□□□ 0.56
FDPS-216ENST00000491013 USP44Q9H0E7 712 aa18.53■□□□□ 0.56
FDPS-216ENST00000491013 DBNDD1Q9H9R9 158 aa18.53■□□□□ 0.56
FDPS-216ENST00000491013 CHMP3Q9Y3E7 222 aa18.53■□□□□ 0.56
FDPS-216ENST00000491013 KIF16BQ96L93 1317 aa18.52■□□□□ 0.56
FDPS-216ENST00000491013 CEP350Q5VT06 3117 aa18.52■□□□□ 0.56
FDPS-216ENST00000491013 RAD17O75943 681 aa18.52■□□□□ 0.56
FDPS-216ENST00000491013 CCT4P50991 539 aaKnown RBP18.52■□□□□ 0.56
FDPS-216ENST00000491013 TNIP1Q15025 636 aa18.52■□□□□ 0.56
FDPS-216ENST00000491013 ANKRD2Q9GZV1 360 aa18.52■□□□□ 0.56
FDPS-216ENST00000491013 ECE2O60344 883 aa18.51■□□□□ 0.55
FDPS-216ENST00000491013 POTEIP0CG38 1075 aa18.51■□□□□ 0.55
FDPS-216ENST00000491013 POTEJP0CG39 1038 aa18.51■□□□□ 0.55
FDPS-216ENST00000491013 LMOD1P29536 600 aaPredicted RBP18.51■□□□□ 0.55
FDPS-216ENST00000491013 DOK7Q18PE1 504 aa18.51■□□□□ 0.55
FDPS-216ENST00000491013 CCDC57Q2TAC2 916 aa18.51■□□□□ 0.55
FDPS-216ENST00000491013 RABL6Q3YEC7 729 aaPredicted RBP18.51■□□□□ 0.55
FDPS-216ENST00000491013 CHADLQ6NUI6 762 aa18.51■□□□□ 0.55
FDPS-216ENST00000491013 PNMA8AQ86V59 439 aaPredicted RBP18.51■□□□□ 0.55
FDPS-216ENST00000491013 WTIPA6NIX2 430 aaPredicted RBP18.5■□□□□ 0.55
FDPS-216ENST00000491013 EPS15P42566 896 aa18.5■□□□□ 0.55
FDPS-216ENST00000491013 LDHDQ86WU2 507 aa18.5■□□□□ 0.55
FDPS-216ENST00000491013 LEMD3Q9Y2U8 911 aa18.5■□□□□ 0.55
FDPS-216ENST00000491013 MED23Q9ULK4 1368 aa18.5■□□□□ 0.55
FDPS-216ENST00000491013 BCAR3O75815 825 aa18.49■□□□□ 0.55
FDPS-216ENST00000491013 GMPSP49915 693 aaPredicted RBP18.49■□□□□ 0.55
FDPS-216ENST00000491013 APLP1P51693 650 aa18.49■□□□□ 0.55
FDPS-216ENST00000491013 CHRNDQ07001 517 aa18.49■□□□□ 0.55
FDPS-216ENST00000491013 ANKRD44Q8N8A2 993 aa18.49■□□□□ 0.55
FDPS-216ENST00000491013 BICC1Q9H694 974 aaKnown RBP18.49■□□□□ 0.55
FDPS-216ENST00000491013 GPRC5DQ9NZD1 345 aa18.49■□□□□ 0.55
FDPS-216ENST00000491013 PSMD14O00487 310 aa18.48■□□□□ 0.55
FDPS-216ENST00000491013 IPO8O15397 1037 aaKnown RBP18.48■□□□□ 0.55
FDPS-216ENST00000491013 EAPPQ56P03 285 aaPredicted RBP18.48■□□□□ 0.55
FDPS-216ENST00000491013 ZNF594Q96JF6 807 aaPredicted RBP18.48■□□□□ 0.55
FDPS-216ENST00000491013 KCNQ5Q9NR82 932 aa18.48■□□□□ 0.55
FDPS-216ENST00000491013 ZNF646O15015 1829 aaPredicted RBP18.48■□□□□ 0.55
FDPS-216ENST00000491013 ZNF804BA4D1E1 1349 aa18.48■□□□□ 0.55
FDPS-216ENST00000491013 G3V3G9 751 aa18.47■□□□□ 0.55
FDPS-216ENST00000491013 TAF7LQ5H9L4 462 aa18.47■□□□□ 0.55
FDPS-216ENST00000491013 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
FDPS-216ENST00000491013 LDHAL6AQ6ZMR3 332 aa18.47■□□□□ 0.55
FDPS-216ENST00000491013 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
FDPS-216ENST00000491013 USP50Q70EL3 339 aaPredicted RBP18.46■□□□□ 0.55
FDPS-216ENST00000491013 PODNQ7Z5L7 613 aa18.46■□□□□ 0.55
FDPS-216ENST00000491013 DPF2Q92785 391 aa18.46■□□□□ 0.55
FDPS-216ENST00000491013 ADARB2Q9NS39 739 aaKnown RBP18.46■□□□□ 0.55
FDPS-216ENST00000491013 POLR2AP24928 1970 aaKnown RBP18.45■□□□□ 0.54
FDPS-216ENST00000491013 TAF5LO75529 589 aa18.45■□□□□ 0.54
FDPS-216ENST00000491013 VIL1P09327 827 aaKnown RBP18.45■□□□□ 0.54
FDPS-216ENST00000491013 TRIM27P14373 513 aa18.45■□□□□ 0.54
FDPS-216ENST00000491013 ATF7IPQ6VMQ6 1270 aa18.45■□□□□ 0.54
FDPS-216ENST00000491013 TXNRD3Q86VQ6 643 aa18.45■□□□□ 0.54
FDPS-216ENST00000491013 CNNM1Q9NRU3 951 aa18.45■□□□□ 0.54
FDPS-216ENST00000491013 CLEC11AQ9Y240 323 aa18.45■□□□□ 0.54
FDPS-216ENST00000491013 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
FDPS-216ENST00000491013 RPS12P25398 132 aaKnown RBP18.44■□□□□ 0.54
FDPS-216ENST00000491013 HELBQ8NG08 1087 aaPredicted RBP18.44■□□□□ 0.54
FDPS-216ENST00000491013 FRAT1Q92837 279 aaPredicted RBP18.44■□□□□ 0.54
FDPS-216ENST00000491013 COA1Q9GZY4 146 aa18.44■□□□□ 0.54
FDPS-216ENST00000491013 CNOT7Q9UIV1 285 aaKnown RBP18.44■□□□□ 0.54
FDPS-216ENST00000491013 ZNF609O15014 1411 aa18.43■□□□□ 0.54
FDPS-216ENST00000491013 ITGBL1O95965 494 aaPredicted RBP18.43■□□□□ 0.54
FDPS-216ENST00000491013 UBTFL1P0CB47 393 aaPredicted RBP18.43■□□□□ 0.54
FDPS-216ENST00000491013 KLRK1P26718 216 aa18.43■□□□□ 0.54
FDPS-216ENST00000491013 KCNJ4P48050 445 aa18.43■□□□□ 0.54
FDPS-216ENST00000491013 C15orf52Q6ZUT6 534 aaKnown RBP18.43■□□□□ 0.54
FDPS-216ENST00000491013 PUS3Q9BZE2 481 aaKnown RBP18.43■□□□□ 0.54
FDPS-216ENST00000491013 HDAC5Q9UQL6 1122 aa18.43■□□□□ 0.54
FDPS-216ENST00000491013 RIPOR2Q9Y4F9 1068 aa18.43■□□□□ 0.54
FDPS-216ENST00000491013 PASKQ96RG2 1323 aa18.43■□□□□ 0.54
FDPS-216ENST00000491013 IRS2Q9Y4H2 1338 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms