RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 PNMA8AQ86V59 439 aaPredicted RBP19.29■□□□□ 0.68
COL27A1-206ENST00000490831 ANKIB1Q9P2G1 1089 aa19.29■□□□□ 0.68
COL27A1-206ENST00000490831 GGA1Q9UJY5 639 aa19.29■□□□□ 0.68
COL27A1-206ENST00000490831 UTYO14607 1347 aa19.28■□□□□ 0.68
COL27A1-206ENST00000490831 ITGA6P23229 1130 aa19.28■□□□□ 0.68
COL27A1-206ENST00000490831 FAM161AQ3B820 660 aa19.28■□□□□ 0.68
COL27A1-206ENST00000490831 CIAPIN1Q6FI81 312 aa19.28■□□□□ 0.68
COL27A1-206ENST00000490831 SLC4A10Q6U841 1118 aa19.28■□□□□ 0.68
COL27A1-206ENST00000490831 MINPP1Q9UNW1 487 aa19.28■□□□□ 0.68
COL27A1-206ENST00000490831 UFL1O94874 794 aa19.27■□□□□ 0.68
COL27A1-206ENST00000490831 TNIP1Q15025 636 aa19.27■□□□□ 0.68
COL27A1-206ENST00000490831 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
COL27A1-206ENST00000490831 ATP2B4P23634 1241 aa19.26■□□□□ 0.67
COL27A1-206ENST00000490831 LMOD1P29536 600 aaPredicted RBP19.26■□□□□ 0.67
COL27A1-206ENST00000490831 IGHMBP2P38935 993 aaKnown RBP19.26■□□□□ 0.67
COL27A1-206ENST00000490831 EPS15P42566 896 aa19.26■□□□□ 0.67
COL27A1-206ENST00000490831 BCL2L13Q9BXK5 485 aa19.26■□□□□ 0.67
COL27A1-206ENST00000490831 ZC3H12CQ9C0D7 883 aaKnown RBP19.26■□□□□ 0.67
COL27A1-206ENST00000490831 SMC4Q9NTJ3 1288 aa19.26■□□□□ 0.67
COL27A1-206ENST00000490831 C9orf78Q9NZ63 289 aaPredicted RBP19.26■□□□□ 0.67
COL27A1-206ENST00000490831 GPRC5DQ9NZD1 345 aa19.26■□□□□ 0.67
COL27A1-206ENST00000490831 RAD17O75943 681 aa19.25■□□□□ 0.67
COL27A1-206ENST00000490831 EPHA10Q5JZY3 1008 aa19.25■□□□□ 0.67
COL27A1-206ENST00000490831 DNAJC5GQ8N7S2 189 aa19.25■□□□□ 0.67
COL27A1-206ENST00000490831 GPR101Q96P66 508 aaPredicted RBP19.25■□□□□ 0.67
COL27A1-206ENST00000490831 DBNDD1Q9H9R9 158 aa19.25■□□□□ 0.67
COL27A1-206ENST00000490831 SPEF2Q9C093 1822 aa19.25■□□□□ 0.67
COL27A1-206ENST00000490831 ANKRD18BA2A2Z9 1011 aa19.24■□□□□ 0.67
COL27A1-206ENST00000490831 ECE2O60344 883 aa19.24■□□□□ 0.67
COL27A1-206ENST00000490831 GMPSP49915 693 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-206ENST00000490831 EAPPQ56P03 285 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-206ENST00000490831 USP50Q70EL3 339 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-206ENST00000490831 NBPF7P0C2Y1 421 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-206ENST00000490831 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
COL27A1-206ENST00000490831 IFIT5Q13325 482 aaKnown RBP19.23■□□□□ 0.67
COL27A1-206ENST00000490831 LMBR1LQ6UX01 489 aa19.23■□□□□ 0.67
COL27A1-206ENST00000490831 DPF2Q92785 391 aa19.23■□□□□ 0.67
COL27A1-206ENST00000490831 KAZALD1Q96I82 304 aa19.23■□□□□ 0.67
COL27A1-206ENST00000490831 PASKQ96RG2 1323 aa19.23■□□□□ 0.67
COL27A1-206ENST00000490831 MED23Q9ULK4 1368 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 PSMD14O00487 310 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 ITGBL1O95965 494 aaPredicted RBP19.22■□□□□ 0.67
COL27A1-206ENST00000490831 CCT4P50991 539 aaKnown RBP19.22■□□□□ 0.67
COL27A1-206ENST00000490831 DOK7Q18PE1 504 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 SUCLG2Q96I99 432 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 MPHOSPH8Q99549 860 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 ANKRD2Q9GZV1 360 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 ADARB2Q9NS39 739 aaKnown RBP19.22■□□□□ 0.67
COL27A1-206ENST00000490831 LEMD3Q9Y2U8 911 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 ZNF609O15014 1411 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 SCN9AQ15858 1988 aa19.22■□□□□ 0.67
COL27A1-206ENST00000490831 RPS12P25398 132 aaKnown RBP19.21■□□□□ 0.67
COL27A1-206ENST00000490831 KCNQ5Q9NR82 932 aa19.21■□□□□ 0.67
COL27A1-206ENST00000490831 WTIPA6NIX2 430 aaPredicted RBP19.2■□□□□ 0.66
COL27A1-206ENST00000490831 VIL1P09327 827 aaKnown RBP19.2■□□□□ 0.66
COL27A1-206ENST00000490831 HNRNPUQ00839 825 aaKnown RBP eCLIP19.2■□□□□ 0.66
COL27A1-206ENST00000490831 RABL6Q3YEC7 729 aaPredicted RBP19.2■□□□□ 0.66
COL27A1-206ENST00000490831 USP44Q9H0E7 712 aa19.2■□□□□ 0.66
COL27A1-206ENST00000490831 PSME4Q14997 1843 aa19.19■□□□□ 0.66
COL27A1-206ENST00000490831 HTRA3P83110 453 aa19.19■□□□□ 0.66
COL27A1-206ENST00000490831 CHRNDQ07001 517 aa19.19■□□□□ 0.66
COL27A1-206ENST00000490831 CCDC57Q2TAC2 916 aa19.19■□□□□ 0.66
COL27A1-206ENST00000490831 PODNQ7Z5L7 613 aa19.19■□□□□ 0.66
COL27A1-206ENST00000490831 CNOT7Q9UIV1 285 aaKnown RBP19.19■□□□□ 0.66
COL27A1-206ENST00000490831 NOB1Q9ULX3 412 aaKnown RBP19.19■□□□□ 0.66
COL27A1-206ENST00000490831 CLEC11AQ9Y240 323 aa19.19■□□□□ 0.66
COL27A1-206ENST00000490831 CHMP3Q9Y3E7 222 aa19.19■□□□□ 0.66
COL27A1-206ENST00000490831 CNTROBQ8N137 903 aa19.18■□□□□ 0.66
COL27A1-206ENST00000490831 ARHGAP45Q92619 1136 aa19.18■□□□□ 0.66
COL27A1-206ENST00000490831 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
COL27A1-206ENST00000490831 PGAP2Q9UHJ9 254 aa19.18■□□□□ 0.66
COL27A1-206ENST00000490831 ZBTB12Q9Y330 459 aaPredicted RBP19.18■□□□□ 0.66
COL27A1-206ENST00000490831 ZNF804BA4D1E1 1349 aa19.18■□□□□ 0.66
COL27A1-206ENST00000490831 G3V3G9 751 aa19.17■□□□□ 0.66
COL27A1-206ENST00000490831 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
COL27A1-206ENST00000490831 MAP1SQ66K74 1059 aaPredicted RBP19.17■□□□□ 0.66
COL27A1-206ENST00000490831 C15orf52Q6ZUT6 534 aaKnown RBP19.17■□□□□ 0.66
COL27A1-206ENST00000490831 ANKRD44Q8N8A2 993 aa19.17■□□□□ 0.66
COL27A1-206ENST00000490831 KLRG1Q96E93 195 aa19.17■□□□□ 0.66
COL27A1-206ENST00000490831 BICC1Q9H694 974 aaKnown RBP19.17■□□□□ 0.66
COL27A1-206ENST00000490831 CREBZFQ9NS37 354 aa19.17■□□□□ 0.66
COL27A1-206ENST00000490831 KIF16BQ96L93 1317 aa19.17■□□□□ 0.66
COL27A1-206ENST00000490831 IRS2Q9Y4H2 1338 aa19.17■□□□□ 0.66
COL27A1-206ENST00000490831 A0A1B0GUL6 1792 aa19.16■□□□□ 0.66
COL27A1-206ENST00000490831 TXNRD3Q86VQ6 643 aa19.16■□□□□ 0.66
COL27A1-206ENST00000490831 MICALL2Q8IY33 904 aa19.16■□□□□ 0.66
COL27A1-206ENST00000490831 ZC3H15Q8WU90 426 aaKnown RBP19.16■□□□□ 0.66
COL27A1-206ENST00000490831 COA1Q9GZY4 146 aa19.16■□□□□ 0.66
COL27A1-206ENST00000490831 SHTN1A0MZ66 631 aa19.15■□□□□ 0.66
COL27A1-206ENST00000490831 H7C1D1 291 aa19.15■□□□□ 0.66
COL27A1-206ENST00000490831 HIRAP54198 1017 aaPredicted RBP19.15■□□□□ 0.66
COL27A1-206ENST00000490831 LDHAL6AQ6ZMR3 332 aa19.15■□□□□ 0.66
COL27A1-206ENST00000490831 AGBL3Q8NEM8 1001 aa19.15■□□□□ 0.66
COL27A1-206ENST00000490831 TRPM4Q8TD43 1214 aa19.15■□□□□ 0.66
COL27A1-206ENST00000490831 ZNF594Q96JF6 807 aaPredicted RBP19.15■□□□□ 0.66
COL27A1-206ENST00000490831 GMLQ99445 158 aa19.15■□□□□ 0.66
COL27A1-206ENST00000490831 ZBED9Q6R2W3 1325 aa19.15■□□□□ 0.66
COL27A1-206ENST00000490831 USP17L3A6NCW0 530 aa19.14■□□□□ 0.65
COL27A1-206ENST00000490831 USP17L4A6NCW7 530 aa19.14■□□□□ 0.65
COL27A1-206ENST00000490831 RSBN1LQ6PCB5 846 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms